RNA–Protein interactions for RNA: ENST00000579640.5

SS18-213, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,840 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-213ENST00000579640 GSDMCQ9BYG8 508 aa10.52□□□□□ -0.73
SS18-213ENST00000579640 ERVMER34-1Q9H9K5 563 aa10.52□□□□□ -0.73
SS18-213ENST00000579640 TM7SF3Q9NS93 570 aa10.52□□□□□ -0.73
SS18-213ENST00000579640 ZNF358Q9NW07 568 aa10.52□□□□□ -0.73
SS18-213ENST00000579640 BTN3A1O00481 513 aa10.51□□□□□ -0.73
SS18-213ENST00000579640 ZBTB14O43829 449 aa10.51□□□□□ -0.73
SS18-213ENST00000579640 TOP3BO95985 862 aaKnown RBP10.51□□□□□ -0.73
SS18-213ENST00000579640 PROCP04070 461 aa10.51□□□□□ -0.73
SS18-213ENST00000579640 GMPRP36959 345 aa10.51□□□□□ -0.73
SS18-213ENST00000579640 ETV4P43268 484 aa10.51□□□□□ -0.73
SS18-213ENST00000579640 PREPP48147 710 aa10.51□□□□□ -0.73
SS18-213ENST00000579640 GLRBP48167 497 aa10.51□□□□□ -0.73
SS18-213ENST00000579640 CSNK1EP49674 416 aaKnown RBP10.51□□□□□ -0.73
SS18-213ENST00000579640 CTBSQ01459 385 aa10.51□□□□□ -0.73
SS18-213ENST00000579640 TECRLQ5HYJ1 363 aa10.51□□□□□ -0.73
SS18-213ENST00000579640 WASH2PQ6VEQ5 465 aa10.51□□□□□ -0.73
SS18-213ENST00000579640 PRR23BQ6ZRT6 265 aa10.51□□□□□ -0.73
SS18-213ENST00000579640 FAM83HQ6ZRV2 1179 aaPredicted RBP10.51□□□□□ -0.73
SS18-213ENST00000579640 VRK3Q8IV63 474 aa10.51□□□□□ -0.73
SS18-213ENST00000579640 FSTL5Q8N475 847 aaPredicted RBP10.51□□□□□ -0.73
SS18-213ENST00000579640 SPATA6LQ8N4H0 392 aa10.51□□□□□ -0.73
SS18-213ENST00000579640 SKA2Q8WVK7 121 aaPredicted RBP10.51□□□□□ -0.73
SS18-213ENST00000579640 PIGKQ92643 395 aa10.51□□□□□ -0.73
SS18-213ENST00000579640 FAM111AQ96PZ2 611 aa10.51□□□□□ -0.73
SS18-213ENST00000579640 OR52A5Q9H2C5 316 aa10.51□□□□□ -0.73
SS18-213ENST00000579640 WASH6PQ9NQA3 447 aa10.51□□□□□ -0.73
SS18-213ENST00000579640 DNAJC28Q9NX36 388 aa10.51□□□□□ -0.73
SS18-213ENST00000579640 XPR1Q9UBH6 696 aa10.51□□□□□ -0.73
SS18-213ENST00000579640 FAM8A1Q9UBU6 413 aa10.51□□□□□ -0.73
SS18-213ENST00000579640 APOBEC3BQ9UH17 382 aaKnown RBP10.51□□□□□ -0.73
SS18-213ENST00000579640 EMCNQ9ULC0 261 aa10.51□□□□□ -0.73
SS18-213ENST00000579640 PNMA8BQ9ULN7 279 aaPredicted RBP10.51□□□□□ -0.73
SS18-213ENST00000579640 TMCO1Q9UM00 188 aa10.51□□□□□ -0.73
SS18-213ENST00000579640 KCNK6Q9Y257 313 aa10.51□□□□□ -0.73
SS18-213ENST00000579640 DNAJC16Q9Y2G8 782 aa10.51□□□□□ -0.73
SS18-213ENST00000579640 FANCMQ8IYD8 2048 aa10.51□□□□□ -0.73
SS18-213ENST00000579640 ATXN2Q99700 1313 aaKnown RBP10.51□□□□□ -0.73
SS18-213ENST00000579640 NPEPPSL1A6NEC2 478 aa10.51□□□□□ -0.73
SS18-213ENST00000579640 SYCE1LA8MT33 242 aa10.51□□□□□ -0.73
SS18-213ENST00000579640 IFRD1O00458 451 aaPredicted RBP10.51□□□□□ -0.73
SS18-213ENST00000579640 KERAO60938 352 aa10.51□□□□□ -0.73
SS18-213ENST00000579640 MATN4O95460 622 aa10.51□□□□□ -0.73
SS18-213ENST00000579640 ENO2P09104 434 aaPredicted RBP10.51□□□□□ -0.73
SS18-213ENST00000579640 SLC35G4P0C7Q5 338 aa10.51□□□□□ -0.73
SS18-213ENST00000579640 CTSEP14091 401 aa10.51□□□□□ -0.73
SS18-213ENST00000579640 JUNDP17535 347 aa10.51□□□□□ -0.73
SS18-213ENST00000579640 TAC1P20366 129 aa10.51□□□□□ -0.73
SS18-213ENST00000579640 HNRNPKP61978 463 aaKnown RBP eCLIP10.51□□□□□ -0.73
SS18-213ENST00000579640 MPP2Q14168 576 aa10.51□□□□□ -0.73
SS18-213ENST00000579640 DUOXA1Q1HG43 343 aa10.51□□□□□ -0.73
SS18-213ENST00000579640 HHATQ5VTY9 493 aa10.51□□□□□ -0.73
SS18-213ENST00000579640 C16orf46Q6P387 395 aa10.51□□□□□ -0.73
SS18-213ENST00000579640 LAYNQ6UX15 382 aa10.51□□□□□ -0.73
SS18-213ENST00000579640 XKR5Q6UX68 686 aa10.51□□□□□ -0.73
SS18-213ENST00000579640 UNC5DQ6UXZ4 953 aa10.51□□□□□ -0.73
SS18-213ENST00000579640 PDZD3Q86UT5 571 aa10.51□□□□□ -0.73
SS18-213ENST00000579640 SDR16C5Q8N3Y7 309 aa10.51□□□□□ -0.73
SS18-213ENST00000579640 LILRA3Q8N6C8 439 aaPredicted RBP10.51□□□□□ -0.73
SS18-213ENST00000579640 ANKRD42Q8N9B4 389 aa10.51□□□□□ -0.73
SS18-213ENST00000579640 CCDC63Q8NA47 563 aa10.51□□□□□ -0.73
SS18-213ENST00000579640 GPBAR1Q8TDU6 330 aa10.51□□□□□ -0.73
SS18-213ENST00000579640 ASB11Q8WXH4 323 aa10.51□□□□□ -0.73
SS18-213ENST00000579640 PTERQ96BW5 349 aa10.51□□□□□ -0.73
SS18-213ENST00000579640 TMEM168Q9H0V1 697 aa10.51□□□□□ -0.73
SS18-213ENST00000579640 OSGEPL1Q9H4B0 414 aa10.51□□□□□ -0.73
SS18-213ENST00000579640 ALG9Q9H6U8 611 aa10.51□□□□□ -0.73
SS18-213ENST00000579640 TMEM74BQ9NUR3 256 aa10.51□□□□□ -0.73
SS18-213ENST00000579640 SLC17A7Q9P2U7 560 aa10.51□□□□□ -0.73
SS18-213ENST00000579640 SPASTQ9UBP0 616 aa10.51□□□□□ -0.73
SS18-213ENST00000579640 RAB23Q9ULC3 237 aa10.51□□□□□ -0.73
SS18-213ENST00000579640 PCDHGA5Q9Y5G8 931 aa10.51□□□□□ -0.73
SS18-213ENST00000579640 ZNF318Q5VUA4 2279 aa10.5□□□□□ -0.73
SS18-213ENST00000579640 A0A1B0GVT2 93 aa10.5□□□□□ -0.73
SS18-213ENST00000579640 PABPN1LA6NDY0 278 aaKnown RBP10.5□□□□□ -0.73
SS18-213ENST00000579640 GFYI3L273 518 aa10.5□□□□□ -0.73
SS18-213ENST00000579640 CDC7O00311 574 aa10.5□□□□□ -0.73
SS18-213ENST00000579640 PSIP1O75475 530 aaKnown RBP10.5□□□□□ -0.73
SS18-213ENST00000579640 CATP04040 527 aaKnown RBP10.5□□□□□ -0.73
SS18-213ENST00000579640 RPN2P04844 631 aa10.5□□□□□ -0.73
SS18-213ENST00000579640 DHRS4L1P0CG22 281 aa10.5□□□□□ -0.73
SS18-213ENST00000579640 CHN1P15882 459 aa10.5□□□□□ -0.73
SS18-213ENST00000579640 CYP2A7P20853 494 aa10.5□□□□□ -0.73
SS18-213ENST00000579640 PDHA2P29803 388 aa10.5□□□□□ -0.73
SS18-213ENST00000579640 ACTR1BP42025 376 aa10.5□□□□□ -0.73
SS18-213ENST00000579640 CTSKP43235 329 aa10.5□□□□□ -0.73
SS18-213ENST00000579640 ACTR1AP61163 376 aa10.5□□□□□ -0.73
SS18-213ENST00000579640 ELOCQ15369 112 aa10.5□□□□□ -0.73
SS18-213ENST00000579640 TSNQ15631 228 aaKnown RBP10.5□□□□□ -0.73
SS18-213ENST00000579640 FRA10AC1Q70Z53 315 aa10.5□□□□□ -0.73
SS18-213ENST00000579640 RASGRP3Q8IV61 690 aa10.5□□□□□ -0.73
SS18-213ENST00000579640 TMEM151AQ8N4L1 468 aa10.5□□□□□ -0.73
SS18-213ENST00000579640 ARMC2Q8NEN0 867 aa10.5□□□□□ -0.73
SS18-213ENST00000579640 CCDC126Q96EE4 140 aa10.5□□□□□ -0.73
SS18-213ENST00000579640 ATOH8Q96SQ7 321 aa10.5□□□□□ -0.73
SS18-213ENST00000579640 SLC12A9Q9BXP2 914 aa10.5□□□□□ -0.73
SS18-213ENST00000579640 TRIM54Q9BYV2 358 aa10.5□□□□□ -0.73
SS18-213ENST00000579640 UNKQ9C0B0 810 aaKnown RBP10.5□□□□□ -0.73
SS18-213ENST00000579640 RDH14Q9HBH5 336 aa10.5□□□□□ -0.73
SS18-213ENST00000579640 INTS9Q9NV88 658 aaKnown RBP10.5□□□□□ -0.73
SS18-213ENST00000579640 OGFRQ9NZT2 677 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms