RNA–Protein interactions for RNA: ENST00000578009.5

IFT20-205, Transcript of intraflagellar transport 20, humanhuman

TSL 3

Gene IFT20, Length 611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-205ENST00000578009 COPG2Q9UBF2 871 aa4.84□□□□□ -1.63
IFT20-205ENST00000578009 HAO1Q9UJM8 370 aa4.84□□□□□ -1.63
IFT20-205ENST00000578009 EMCNQ9ULC0 261 aa4.84□□□□□ -1.63
IFT20-205ENST00000578009 LZTS1Q9Y250 596 aa4.84□□□□□ -1.63
IFT20-205ENST00000578009 CHKBQ9Y259 395 aa4.84□□□□□ -1.63
IFT20-205ENST00000578009 ATP11BQ9Y2G3 1177 aa4.84□□□□□ -1.63
IFT20-205ENST00000578009 ACOT9Q9Y305 439 aa4.84□□□□□ -1.63
IFT20-205ENST00000578009 INSL5Q9Y5Q6 135 aa4.84□□□□□ -1.63
IFT20-205ENST00000578009 MYO18AQ92614 2054 aaKnown RBP4.84□□□□□ -1.64
IFT20-205ENST00000578009 VWA8A3KMH1 1905 aa4.84□□□□□ -1.64
IFT20-205ENST00000578009 COL4A3Q01955 1670 aa4.83□□□□□ -1.64
IFT20-205ENST00000578009 WDR91A4D1P6 747 aa4.83□□□□□ -1.64
IFT20-205ENST00000578009 TRIM43BA6NCK2 446 aa4.83□□□□□ -1.64
IFT20-205ENST00000578009 TARM1B6A8C7 271 aa4.83□□□□□ -1.64
IFT20-205ENST00000578009 ANKRD65E5RJM6 399 aa4.83□□□□□ -1.64
IFT20-205ENST00000578009 SLCO1B7G3V0H7 640 aa4.83□□□□□ -1.64
IFT20-205ENST00000578009 PRRG1O14668 218 aa4.83□□□□□ -1.64
IFT20-205ENST00000578009 LDB2O43679 373 aa4.83□□□□□ -1.64
IFT20-205ENST00000578009 MGRN1O60291 552 aa4.83□□□□□ -1.64
IFT20-205ENST00000578009 GJB5O95377 273 aa4.83□□□□□ -1.64
IFT20-205ENST00000578009 PENKP01210 267 aaPredicted RBP4.83□□□□□ -1.64
IFT20-205ENST00000578009 PRKCGP05129 697 aa4.83□□□□□ -1.64
IFT20-205ENST00000578009 JUNP05412 331 aaKnown RBP4.83□□□□□ -1.64
IFT20-205ENST00000578009 RHOCP08134 193 aa4.83□□□□□ -1.64
IFT20-205ENST00000578009 HMBSP08397 361 aa4.83□□□□□ -1.64
IFT20-205ENST00000578009 ATXN1LP0C7T5 689 aaKnown RBP4.83□□□□□ -1.64
IFT20-205ENST00000578009 RALBP11234 206 aa4.83□□□□□ -1.64
IFT20-205ENST00000578009 FGF3P11487 239 aaPredicted RBP4.83□□□□□ -1.64
IFT20-205ENST00000578009 CDK4P11802 303 aa4.83□□□□□ -1.64
IFT20-205ENST00000578009 NQO1P15559 274 aaKnown RBP4.83□□□□□ -1.64
IFT20-205ENST00000578009 ALOX15P16050 662 aaPredicted RBP4.83□□□□□ -1.64
IFT20-205ENST00000578009 STMN1P16949 149 aa4.83□□□□□ -1.64
IFT20-205ENST00000578009 RPL17P18621 184 aaKnown RBP4.83□□□□□ -1.64
IFT20-205ENST00000578009 CD9P21926 228 aa4.83□□□□□ -1.64
IFT20-205ENST00000578009 GABRB3P28472 473 aa4.83□□□□□ -1.64
IFT20-205ENST00000578009 CORO1AP31146 461 aaKnown RBP4.83□□□□□ -1.64
IFT20-205ENST00000578009 SLC6A4P31645 630 aa4.83□□□□□ -1.64
IFT20-205ENST00000578009 SERPINB5P36952 375 aa4.83□□□□□ -1.64
IFT20-205ENST00000578009 CD86P42081 329 aa4.83□□□□□ -1.64
IFT20-205ENST00000578009 CD151P48509 253 aa4.83□□□□□ -1.64
IFT20-205ENST00000578009 CSNK1DP48730 415 aa4.83□□□□□ -1.64
IFT20-205ENST00000578009 DNAJB13P59910 316 aa4.83□□□□□ -1.64
IFT20-205ENST00000578009 RAB10P61026 200 aa4.83□□□□□ -1.64
IFT20-205ENST00000578009 RPL26P61254 145 aaKnown RBP4.83□□□□□ -1.64
IFT20-205ENST00000578009 SLC7A9P82251 487 aa4.83□□□□□ -1.64
IFT20-205ENST00000578009 DSC2Q02487 901 aa4.83□□□□□ -1.64
IFT20-205ENST00000578009 SLC20A2Q08357 652 aa4.83□□□□□ -1.64
IFT20-205ENST00000578009 ITKQ08881 620 aa4.83□□□□□ -1.64
IFT20-205ENST00000578009 PPIGQ13427 754 aaKnown RBP eCLIP4.83□□□□□ -1.64
IFT20-205ENST00000578009 OLIG2Q13516 323 aa4.83□□□□□ -1.64
IFT20-205ENST00000578009 SLC12A1Q13621 1099 aa4.83□□□□□ -1.64
IFT20-205ENST00000578009 ZNF235Q14590 738 aa4.83□□□□□ -1.64
IFT20-205ENST00000578009 GRM3Q14832 879 aa4.83□□□□□ -1.64
IFT20-205ENST00000578009 POU6F1Q14863 301 aa4.83□□□□□ -1.64
IFT20-205ENST00000578009 PCLAFQ15004 111 aa4.83□□□□□ -1.64
IFT20-205ENST00000578009 CHI3L2Q15782 390 aa4.83□□□□□ -1.64
IFT20-205ENST00000578009 LRRC26Q2I0M4 334 aa4.83□□□□□ -1.64
IFT20-205ENST00000578009 TAF1BQ53T94 588 aaPredicted RBP4.83□□□□□ -1.64
IFT20-205ENST00000578009 SIRPB2Q5JXA9 342 aa4.83□□□□□ -1.64
IFT20-205ENST00000578009 FAM182AQ5T1J6 154 aa4.83□□□□□ -1.64
IFT20-205ENST00000578009 METTL21CQ5VZV1 264 aa4.83□□□□□ -1.64
IFT20-205ENST00000578009 ZYG11AQ6WRX3 759 aa4.83□□□□□ -1.64
IFT20-205ENST00000578009 NECAB2Q7Z6G3 386 aa4.83□□□□□ -1.64
IFT20-205ENST00000578009 CLNKQ7Z7G1 428 aa4.83□□□□□ -1.64
IFT20-205ENST00000578009 TMEM150AQ86TG1 271 aa4.83□□□□□ -1.64
IFT20-205ENST00000578009 DENND1CQ8IV53 801 aa4.83□□□□□ -1.64
IFT20-205ENST00000578009 PGBD5Q8N414 524 aa4.83□□□□□ -1.64
IFT20-205ENST00000578009 CPXM2Q8N436 756 aa4.83□□□□□ -1.64
IFT20-205ENST00000578009 KIAA1958Q8N8K9 716 aa4.83□□□□□ -1.64
IFT20-205ENST00000578009 ZNF557Q8N988 423 aaPredicted RBP4.83□□□□□ -1.64
IFT20-205ENST00000578009 HJURPQ8NCD3 748 aaPredicted RBP4.83□□□□□ -1.64
IFT20-205ENST00000578009 CFAP61Q8NHU2 1237 aa4.83□□□□□ -1.64
IFT20-205ENST00000578009 PPP1R14CQ8TAE6 165 aa4.83□□□□□ -1.64
IFT20-205ENST00000578009 STYXQ8WUJ0 223 aa4.83□□□□□ -1.64
IFT20-205ENST00000578009 PDCD6IPQ8WUM4 868 aaKnown RBP4.83□□□□□ -1.64
IFT20-205ENST00000578009 MRPS31Q92665 395 aaKnown RBP4.83□□□□□ -1.64
IFT20-205ENST00000578009 USP13Q92995 863 aaPredicted RBP4.83□□□□□ -1.64
IFT20-205ENST00000578009 SKA1Q96BD8 255 aa4.83□□□□□ -1.64
IFT20-205ENST00000578009 TRIM43Q96BQ3 446 aaPredicted RBP4.83□□□□□ -1.64
IFT20-205ENST00000578009 KLHL29Q96CT2 875 aa4.83□□□□□ -1.64
IFT20-205ENST00000578009 PABPC5Q96DU9 382 aaKnown RBP4.83□□□□□ -1.64
IFT20-205ENST00000578009 CCDC126Q96EE4 140 aa4.83□□□□□ -1.64
IFT20-205ENST00000578009 NSL1Q96IY1 281 aa4.83□□□□□ -1.64
IFT20-205ENST00000578009 ZNF778Q96MU6 729 aa4.83□□□□□ -1.64
IFT20-205ENST00000578009 WDR92Q96MX6 357 aa4.83□□□□□ -1.64
IFT20-205ENST00000578009 RAB3IPQ96QF0 476 aaPredicted RBP4.83□□□□□ -1.64
IFT20-205ENST00000578009 NUDCD1Q96RS6 583 aa4.83□□□□□ -1.64
IFT20-205ENST00000578009 SEMA3CQ99985 751 aa4.83□□□□□ -1.64
IFT20-205ENST00000578009 C1QTNF1Q9BXJ1 281 aa4.83□□□□□ -1.64
IFT20-205ENST00000578009 ZBP1Q9H171 429 aa4.83□□□□□ -1.64
IFT20-205ENST00000578009 MYLK2Q9H1R3 596 aa4.83□□□□□ -1.64
IFT20-205ENST00000578009 LRMDAQ9H2I8 198 aa4.83□□□□□ -1.64
IFT20-205ENST00000578009 ECT2Q9H8V3 914 aa4.83□□□□□ -1.64
IFT20-205ENST00000578009 NMRAL1Q9HBL8 299 aa4.83□□□□□ -1.64
IFT20-205ENST00000578009 POPDC3Q9HBV1 291 aa4.83□□□□□ -1.64
IFT20-205ENST00000578009 SLC40A1Q9NP59 571 aa4.83□□□□□ -1.64
IFT20-205ENST00000578009 ALG13Q9NP73 1137 aaKnown RBP4.83□□□□□ -1.64
IFT20-205ENST00000578009 IARS2Q9NSE4 1012 aaKnown RBP4.83□□□□□ -1.64
IFT20-205ENST00000578009 PIH1D1Q9NWS0 290 aaKnown RBP4.83□□□□□ -1.64
IFT20-205ENST00000578009 OXSMQ9NWU1 459 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms