RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 B4GALNT4Q76KP1 1039 aa12.97□□□□□ -0.33
COPS3-214ENST00000577246 VSIG1Q86XK7 387 aa12.97□□□□□ -0.33
COPS3-214ENST00000577246 OR4E2Q8NGC2 313 aa12.97□□□□□ -0.33
COPS3-214ENST00000577246 LCN9Q8WX39 176 aa12.97□□□□□ -0.33
COPS3-214ENST00000577246 WDR77Q9BQA1 342 aaPredicted RBP12.97□□□□□ -0.33
COPS3-214ENST00000577246 CEP41Q9BYV8 373 aa12.97□□□□□ -0.33
COPS3-214ENST00000577246 GLOD4Q9HC38 313 aa12.97□□□□□ -0.33
COPS3-214ENST00000577246 UVRAGQ9P2Y5 699 aa12.97□□□□□ -0.33
COPS3-214ENST00000577246 NDOR1Q9UHB4 597 aa12.97□□□□□ -0.33
COPS3-214ENST00000577246 SPO11Q9Y5K1 396 aa12.97□□□□□ -0.33
COPS3-214ENST00000577246 AP1M2Q9Y6Q5 423 aa12.97□□□□□ -0.33
COPS3-214ENST00000577246 HIVEP3Q5T1R4 2406 aa12.96□□□□□ -0.33
COPS3-214ENST00000577246 APOL1O14791 398 aa12.96□□□□□ -0.33
COPS3-214ENST00000577246 ZNF749O43361 778 aa12.96□□□□□ -0.33
COPS3-214ENST00000577246 KLF7O75840 302 aaPredicted RBP12.96□□□□□ -0.33
COPS3-214ENST00000577246 MT-CYBP00156 380 aaPredicted RBP12.96□□□□□ -0.33
COPS3-214ENST00000577246 EPOP01588 193 aa12.96□□□□□ -0.33
COPS3-214ENST00000577246 POU3F2P20265 443 aaPredicted RBP12.96□□□□□ -0.33
COPS3-214ENST00000577246 KDELR1P24390 212 aa12.96□□□□□ -0.33
COPS3-214ENST00000577246 ITGA3P26006 1051 aa12.96□□□□□ -0.33
COPS3-214ENST00000577246 SOX8P57073 446 aa12.96□□□□□ -0.33
COPS3-214ENST00000577246 LLGL1Q15334 1064 aa12.96□□□□□ -0.33
COPS3-214ENST00000577246 NFKBIBQ15653 356 aa12.96□□□□□ -0.33
COPS3-214ENST00000577246 ZRSR2Q15696 482 aaKnown RBP12.96□□□□□ -0.33
COPS3-214ENST00000577246 CYP2A13Q16696 494 aa12.96□□□□□ -0.33
COPS3-214ENST00000577246 TEX44Q53QW1 395 aa12.96□□□□□ -0.33
COPS3-214ENST00000577246 FIGNQ5HY92 759 aa12.96□□□□□ -0.33
COPS3-214ENST00000577246 IRAK1BP1Q5VVH5 260 aa12.96□□□□□ -0.33
COPS3-214ENST00000577246 MLIPQ5VWP3 458 aa12.96□□□□□ -0.33
COPS3-214ENST00000577246 DUS1LQ6P1R4 473 aaKnown RBP12.96□□□□□ -0.33
COPS3-214ENST00000577246 FBXO38Q6PIJ6 1188 aa12.96□□□□□ -0.33
COPS3-214ENST00000577246 GLT6D1Q7Z4J2 308 aa12.96□□□□□ -0.33
COPS3-214ENST00000577246 HOOK3Q86VS8 718 aa12.96□□□□□ -0.33
COPS3-214ENST00000577246 PLD5Q8N7P1 536 aa12.96□□□□□ -0.33
COPS3-214ENST00000577246 OR2Y1Q8NGV0 311 aa12.96□□□□□ -0.33
COPS3-214ENST00000577246 SPATA22Q8NHS9 363 aa12.96□□□□□ -0.33
COPS3-214ENST00000577246 PROKR1Q8TCW9 393 aa12.96□□□□□ -0.33
COPS3-214ENST00000577246 PPP4R1Q8TF05 950 aa12.96□□□□□ -0.33
COPS3-214ENST00000577246 SYN2Q92777 582 aaPredicted RBP12.96□□□□□ -0.33
COPS3-214ENST00000577246 NACC2Q96BF6 587 aa12.96□□□□□ -0.33
COPS3-214ENST00000577246 PITPNM3Q9BZ71 974 aa12.96□□□□□ -0.33
COPS3-214ENST00000577246 ZNF552Q9H707 407 aaPredicted RBP12.96□□□□□ -0.33
COPS3-214ENST00000577246 ATP13A2Q9NQ11 1180 aa12.96□□□□□ -0.33
COPS3-214ENST00000577246 P4HTMQ9NXG6 502 aa12.96□□□□□ -0.33
COPS3-214ENST00000577246 IL17CQ9P0M4 197 aa12.96□□□□□ -0.33
COPS3-214ENST00000577246 CTTNBP2NLQ9P2B4 639 aa12.96□□□□□ -0.33
COPS3-214ENST00000577246 FAM153AQ9UHL3 310 aa12.96□□□□□ -0.33
COPS3-214ENST00000577246 PTRH2Q9Y3E5 179 aaKnown RBP12.96□□□□□ -0.33
COPS3-214ENST00000577246 LRBAP50851 2863 aa12.95□□□□□ -0.34
COPS3-214ENST00000577246 CRYBG3Q68DQ2 2970 aa12.95□□□□□ -0.34
COPS3-214ENST00000577246 A0A1B0GUH1 482 aa12.95□□□□□ -0.34
COPS3-214ENST00000577246 LRRD1A4D1F6 860 aa12.95□□□□□ -0.34
COPS3-214ENST00000577246 SMTNL1A8MU46 457 aa12.95□□□□□ -0.34
COPS3-214ENST00000577246 C2orf74A8MZ97 194 aa12.95□□□□□ -0.34
COPS3-214ENST00000577246 UGT1A9O60656 530 aa12.95□□□□□ -0.34
COPS3-214ENST00000577246 SERPING1P05155 500 aa12.95□□□□□ -0.34
COPS3-214ENST00000577246 RALBP11234 206 aa12.95□□□□□ -0.34
COPS3-214ENST00000577246 EDN3P14138 238 aa12.95□□□□□ -0.34
COPS3-214ENST00000577246 UGT1A6P19224 532 aa12.95□□□□□ -0.34
COPS3-214ENST00000577246 UGT1A1P22309 533 aa12.95□□□□□ -0.34
COPS3-214ENST00000577246 UGT1A4P22310 534 aa12.95□□□□□ -0.34
COPS3-214ENST00000577246 PRDX3P30048 256 aaKnown RBP12.95□□□□□ -0.34
COPS3-214ENST00000577246 LMAN1P49257 510 aa12.95□□□□□ -0.34
COPS3-214ENST00000577246 DCDP81605 110 aaKnown RBP12.95□□□□□ -0.34
COPS3-214ENST00000577246 AIMP2Q13155 320 aaKnown RBP12.95□□□□□ -0.34
COPS3-214ENST00000577246 BCL7AQ4VC05 210 aa12.95□□□□□ -0.34
COPS3-214ENST00000577246 ODF2Q5BJF6 829 aa12.95□□□□□ -0.34
COPS3-214ENST00000577246 SLC9A4Q6AI14 798 aa12.95□□□□□ -0.34
COPS3-214ENST00000577246 ALKBH5Q6P6C2 394 aaKnown RBP12.95□□□□□ -0.34
COPS3-214ENST00000577246 ZNF449Q6P9G9 518 aa12.95□□□□□ -0.34
COPS3-214ENST00000577246 BZW1Q7L1Q6 419 aaKnown RBP12.95□□□□□ -0.34
COPS3-214ENST00000577246 DET1Q7L5Y6 550 aa12.95□□□□□ -0.34
COPS3-214ENST00000577246 CUZD1Q86UP6 607 aa12.95□□□□□ -0.34
COPS3-214ENST00000577246 KCNMB4Q86W47 210 aa12.95□□□□□ -0.34
COPS3-214ENST00000577246 SPDYE1Q8NFV5 336 aaPredicted RBP12.95□□□□□ -0.34
COPS3-214ENST00000577246 HM13Q8TCT9 377 aa12.95□□□□□ -0.34
COPS3-214ENST00000577246 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.95□□□□□ -0.34
COPS3-214ENST00000577246 PTERQ96BW5 349 aa12.95□□□□□ -0.34
COPS3-214ENST00000577246 LINC00615Q96LM1 132 aaPredicted RBP12.95□□□□□ -0.34
COPS3-214ENST00000577246 PPM1MQ96MI6 270 aa12.95□□□□□ -0.34
COPS3-214ENST00000577246 AP1M1Q9BXS5 423 aa12.95□□□□□ -0.34
COPS3-214ENST00000577246 UGT1A7Q9HAW7 530 aa12.95□□□□□ -0.34
COPS3-214ENST00000577246 UGT1A10Q9HAW8 530 aa12.95□□□□□ -0.34
COPS3-214ENST00000577246 UGT1A8Q9HAW9 530 aa12.95□□□□□ -0.34
COPS3-214ENST00000577246 IFT80Q9P2H3 777 aaPredicted RBP12.95□□□□□ -0.34
COPS3-214ENST00000577246 OSGIN2Q9Y236 505 aa12.95□□□□□ -0.34
COPS3-214ENST00000577246 MED13Q9UHV7 2174 aa12.95□□□□□ -0.34
COPS3-214ENST00000577246 ANKRD17O75179 2603 aaKnown RBP12.95□□□□□ -0.34
COPS3-214ENST00000577246 LOC285095A0A1B0GVY8 99 aa12.94□□□□□ -0.34
COPS3-214ENST00000577246 PRSS44E7EML9 344 aa12.94□□□□□ -0.34
COPS3-214ENST00000577246 IFRD1O00458 451 aaPredicted RBP12.94□□□□□ -0.34
COPS3-214ENST00000577246 DDX3YO15523 660 aaKnown RBP12.94□□□□□ -0.34
COPS3-214ENST00000577246 OR2B3O76000 313 aa12.94□□□□□ -0.34
COPS3-214ENST00000577246 PRAMEF1O95521 474 aa12.94□□□□□ -0.34
COPS3-214ENST00000577246 ST6GAL1P15907 406 aa12.94□□□□□ -0.34
COPS3-214ENST00000577246 WNT3AP56704 352 aa12.94□□□□□ -0.34
COPS3-214ENST00000577246 TAS2R40P59535 323 aa12.94□□□□□ -0.34
COPS3-214ENST00000577246 SIRPB2Q5JXA9 342 aa12.94□□□□□ -0.34
COPS3-214ENST00000577246 ZNF385CQ66K41 422 aaPredicted RBP12.94□□□□□ -0.34
COPS3-214ENST00000577246 B3GNTL1Q67FW5 361 aaPredicted RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms