RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 SNX2O60749 519 aa6.15□□□□□ -1.42
NUP88-212ENST00000576708 DNAJC6O75061 913 aa6.15□□□□□ -1.42
NUP88-212ENST00000576708 PEX14O75381 377 aa6.15□□□□□ -1.42
NUP88-212ENST00000576708 PROSCO94903 275 aa6.15□□□□□ -1.42
NUP88-212ENST00000576708 GYPCP04921 128 aa6.15□□□□□ -1.42
NUP88-212ENST00000576708 SCG5P05408 212 aa6.15□□□□□ -1.42
NUP88-212ENST00000576708 MMP2P08253 660 aa6.15□□□□□ -1.42
NUP88-212ENST00000576708 PIRTP0C851 137 aa6.15□□□□□ -1.42
NUP88-212ENST00000576708 ACP5P13686 325 aa6.15□□□□□ -1.42
NUP88-212ENST00000576708 CCNCP24863 283 aa6.15□□□□□ -1.42
NUP88-212ENST00000576708 CASP14P31944 242 aa6.15□□□□□ -1.42
NUP88-212ENST00000576708 CD86P42081 329 aa6.15□□□□□ -1.42
NUP88-212ENST00000576708 MAPK9P45984 424 aa6.15□□□□□ -1.42
NUP88-212ENST00000576708 FOXD4Q12950 439 aaPredicted RBP6.15□□□□□ -1.42
NUP88-212ENST00000576708 ZBTB17Q13105 803 aa6.15□□□□□ -1.42
NUP88-212ENST00000576708 NFATC2Q13469 925 aa6.15□□□□□ -1.42
NUP88-212ENST00000576708 GALNT3Q14435 633 aa6.15□□□□□ -1.42
NUP88-212ENST00000576708 HADHQ16836 314 aaKnown RBP6.15□□□□□ -1.42
NUP88-212ENST00000576708 GLIPR1L2Q4G1C9 344 aa6.15□□□□□ -1.42
NUP88-212ENST00000576708 CCDC181Q5TID7 509 aa6.15□□□□□ -1.42
NUP88-212ENST00000576708 ANKS6Q68DC2 871 aa6.15□□□□□ -1.42
NUP88-212ENST00000576708 NPNTQ6UXI9 565 aa6.15□□□□□ -1.42
NUP88-212ENST00000576708 CHST15Q7LFX5 561 aaPredicted RBP6.15□□□□□ -1.42
NUP88-212ENST00000576708 KDELC2Q7Z4H8 507 aa6.15□□□□□ -1.42
NUP88-212ENST00000576708 FAM129CQ86XR2 697 aa6.15□□□□□ -1.42
NUP88-212ENST00000576708 GALNT13Q8IUC8 556 aa6.15□□□□□ -1.42
NUP88-212ENST00000576708 CCDC103Q8IW40 242 aa6.15□□□□□ -1.42
NUP88-212ENST00000576708 PPIL6Q8IXY8 311 aa6.15□□□□□ -1.42
NUP88-212ENST00000576708 CNTD1Q8N815 330 aa6.15□□□□□ -1.42
NUP88-212ENST00000576708 CCNYQ8ND76 341 aa6.15□□□□□ -1.42
NUP88-212ENST00000576708 RAPGEF5Q92565 580 aa6.15□□□□□ -1.42
NUP88-212ENST00000576708 SYN2Q92777 582 aaPredicted RBP6.15□□□□□ -1.42
NUP88-212ENST00000576708 TMEM159Q96B96 161 aa6.15□□□□□ -1.42
NUP88-212ENST00000576708 EID2BQ96D98 161 aa6.15□□□□□ -1.42
NUP88-212ENST00000576708 COX14Q96I36 57 aa6.15□□□□□ -1.42
NUP88-212ENST00000576708 CCDC140Q96MF4 163 aa6.15□□□□□ -1.42
NUP88-212ENST00000576708 TSGA13Q96PP4 275 aa6.15□□□□□ -1.42
NUP88-212ENST00000576708 SLC38A3Q99624 504 aa6.15□□□□□ -1.42
NUP88-212ENST00000576708 CTRCQ99895 268 aa6.15□□□□□ -1.42
NUP88-212ENST00000576708 RNF32Q9H0A6 362 aa6.15□□□□□ -1.42
NUP88-212ENST00000576708 CDH19Q9H159 772 aa6.15□□□□□ -1.42
NUP88-212ENST00000576708 PCDH9Q9HC56 1237 aa6.15□□□□□ -1.42
NUP88-212ENST00000576708 KCTD5Q9NXV2 234 aa6.15□□□□□ -1.42
NUP88-212ENST00000576708 SLC39A1Q9NY26 324 aa6.15□□□□□ -1.42
NUP88-212ENST00000576708 SEPT10Q9P0V9 454 aa6.15□□□□□ -1.42
NUP88-212ENST00000576708 IFNKQ9P0W0 207 aa6.15□□□□□ -1.42
NUP88-212ENST00000576708 CTTNBP2NLQ9P2B4 639 aa6.15□□□□□ -1.42
NUP88-212ENST00000576708 RCOR3Q9P2K3 495 aaPredicted RBP6.15□□□□□ -1.42
NUP88-212ENST00000576708 IMPACTQ9P2X3 320 aa6.15□□□□□ -1.42
NUP88-212ENST00000576708 TBC1D29Q9UFV1 150 aa6.15□□□□□ -1.42
NUP88-212ENST00000576708 B3GALT1Q9Y5Z6 326 aa6.15□□□□□ -1.42
NUP88-212ENST00000576708 BZW2Q9Y6E2 419 aaKnown RBP6.15□□□□□ -1.42
NUP88-212ENST00000576708 TENM4Q6N022 2769 aa6.15□□□□□ -1.43
NUP88-212ENST00000576708 UNC13CQ8NB66 2214 aa6.14□□□□□ -1.43
NUP88-212ENST00000576708 C1orf232A0A0U1RR37 186 aa6.14□□□□□ -1.43
NUP88-212ENST00000576708 HGSO14964 777 aaPredicted RBP6.14□□□□□ -1.43
NUP88-212ENST00000576708 SLC4A1P02730 911 aa6.14□□□□□ -1.43
NUP88-212ENST00000576708 MSL3P1P0C860 447 aa6.14□□□□□ -1.43
NUP88-212ENST00000576708 THRAP10827 490 aa6.14□□□□□ -1.43
NUP88-212ENST00000576708 LIFP15018 202 aa6.14□□□□□ -1.43
NUP88-212ENST00000576708 PRKCAP17252 672 aa6.14□□□□□ -1.43
NUP88-212ENST00000576708 KDELR1P24390 212 aa6.14□□□□□ -1.43
NUP88-212ENST00000576708 NFKBIAP25963 317 aa6.14□□□□□ -1.43
NUP88-212ENST00000576708 CSTF2P33240 577 aaKnown RBP eCLIP6.14□□□□□ -1.43
NUP88-212ENST00000576708 UGT1A3P35503 534 aa6.14□□□□□ -1.43
NUP88-212ENST00000576708 GPR3P46089 330 aa6.14□□□□□ -1.43
NUP88-212ENST00000576708 SPINT3P49223 89 aa6.14□□□□□ -1.43
NUP88-212ENST00000576708 SQSTM1Q13501 440 aa6.14□□□□□ -1.43
NUP88-212ENST00000576708 MESDQ14696 234 aa6.14□□□□□ -1.43
NUP88-212ENST00000576708 LLGL1Q15334 1064 aa6.14□□□□□ -1.43
NUP88-212ENST00000576708 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.14□□□□□ -1.43
NUP88-212ENST00000576708 SLC35F1Q5T1Q4 408 aa6.14□□□□□ -1.43
NUP88-212ENST00000576708 ZFYVE27Q5T4F4 411 aa6.14□□□□□ -1.43
NUP88-212ENST00000576708 ALS2CLQ60I27 953 aa6.14□□□□□ -1.43
NUP88-212ENST00000576708 TIGD7Q6NT04 549 aaPredicted RBP6.14□□□□□ -1.43
NUP88-212ENST00000576708 TMEM71Q6P5X7 295 aa6.14□□□□□ -1.43
NUP88-212ENST00000576708 TIPARPQ7Z3E1 657 aaKnown RBP6.14□□□□□ -1.43
NUP88-212ENST00000576708 CCDC13Q8IYE1 715 aa6.14□□□□□ -1.43
NUP88-212ENST00000576708 NRSN1Q8IZ57 195 aa6.14□□□□□ -1.43
NUP88-212ENST00000576708 UNC5BQ8IZJ1 945 aa6.14□□□□□ -1.43
NUP88-212ENST00000576708 NDUFAF2Q8N183 169 aa6.14□□□□□ -1.43
NUP88-212ENST00000576708 SFRP1Q8N474 314 aa6.14□□□□□ -1.43
NUP88-212ENST00000576708 BMPERQ8N8U9 685 aa6.14□□□□□ -1.43
NUP88-212ENST00000576708 GPR26Q8NDV2 337 aa6.14□□□□□ -1.43
NUP88-212ENST00000576708 NUP43Q8NFH3 380 aa6.14□□□□□ -1.43
NUP88-212ENST00000576708 OR4D9Q8NGE8 314 aa6.14□□□□□ -1.43
NUP88-212ENST00000576708 EXD1Q8NHP7 514 aa6.14□□□□□ -1.43
NUP88-212ENST00000576708 NCSTNQ92542 709 aa6.14□□□□□ -1.43
NUP88-212ENST00000576708 FAF2Q96CS3 445 aa6.14□□□□□ -1.43
NUP88-212ENST00000576708 C1orf159Q96HA4 380 aa6.14□□□□□ -1.43
NUP88-212ENST00000576708 AHCYL2Q96HN2 611 aaKnown RBP6.14□□□□□ -1.43
NUP88-212ENST00000576708 RNF157Q96PX1 679 aa6.14□□□□□ -1.43
NUP88-212ENST00000576708 TAAR9Q96RI9 348 aa6.14□□□□□ -1.43
NUP88-212ENST00000576708 ZNF670Q9BS34 389 aa6.14□□□□□ -1.43
NUP88-212ENST00000576708 TBC1D10AQ9BXI6 508 aa6.14□□□□□ -1.43
NUP88-212ENST00000576708 XPO4Q9C0E2 1151 aaKnown RBP6.14□□□□□ -1.43
NUP88-212ENST00000576708 FAM83DQ9H4H8 585 aa6.14□□□□□ -1.43
NUP88-212ENST00000576708 APMAPQ9HDC9 416 aa6.14□□□□□ -1.43
NUP88-212ENST00000576708 PRDM8Q9NQV8 689 aa6.14□□□□□ -1.43
NUP88-212ENST00000576708 AKAP7Q9P0M2 348 aaPredicted RBP6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms