RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 ZNF534Q76KX8 674 aa14.89□□□□□ -0.03
SMG6-220ENST00000576218 LDB1Q86U70 411 aaPredicted RBP14.89□□□□□ -0.03
SMG6-220ENST00000576218 PPIL6Q8IXY8 311 aa14.89□□□□□ -0.03
SMG6-220ENST00000576218 MPP5Q8N3R9 675 aa14.89□□□□□ -0.03
SMG6-220ENST00000576218 ZFPM2Q8WW38 1151 aa14.89□□□□□ -0.03
SMG6-220ENST00000576218 LCN9Q8WX39 176 aa14.89□□□□□ -0.03
SMG6-220ENST00000576218 ZNF669Q96BR6 464 aaPredicted RBP14.89□□□□□ -0.03
SMG6-220ENST00000576218 MFSD3Q96ES6 412 aa14.89□□□□□ -0.03
SMG6-220ENST00000576218 RUNDC3BQ96NL0 473 aa14.89□□□□□ -0.03
SMG6-220ENST00000576218 HGH1Q9BTY7 390 aa14.89□□□□□ -0.03
SMG6-220ENST00000576218 KIFC1Q9BW19 673 aa14.89□□□□□ -0.03
SMG6-220ENST00000576218 SRMSQ9H3Y6 488 aa14.89□□□□□ -0.03
SMG6-220ENST00000576218 KIR3DX1Q9H7L2 352 aa14.89□□□□□ -0.03
SMG6-220ENST00000576218 OCIAD1Q9NX40 245 aa14.89□□□□□ -0.03
SMG6-220ENST00000576218 OGFRQ9NZT2 677 aa14.89□□□□□ -0.03
SMG6-220ENST00000576218 FOXJ2Q9P0K8 574 aa14.89□□□□□ -0.03
SMG6-220ENST00000576218 SLC24A2Q9UI40 661 aa14.89□□□□□ -0.03
SMG6-220ENST00000576218 GNPTGQ9UJJ9 305 aa14.89□□□□□ -0.03
SMG6-220ENST00000576218 WDFY3Q8IZQ1 3526 aa14.89□□□□□ -0.03
SMG6-220ENST00000576218 GSAPA4D1B5 854 aa14.88□□□□□ -0.03
SMG6-220ENST00000576218 OR6C74A6NCV1 312 aa14.88□□□□□ -0.03
SMG6-220ENST00000576218 SDR42E2A6NKP2 422 aa14.88□□□□□ -0.03
SMG6-220ENST00000576218 B4E171 279 aa14.88□□□□□ -0.03
SMG6-220ENST00000576218 STMND1H3BQB6 276 aa14.88□□□□□ -0.03
SMG6-220ENST00000576218 PRMT5O14744 637 aaPredicted RBP14.88□□□□□ -0.03
SMG6-220ENST00000576218 KDM1AO60341 852 aa14.88□□□□□ -0.03
SMG6-220ENST00000576218 APOA4P06727 396 aa14.88□□□□□ -0.03
SMG6-220ENST00000576218 LIPCP11150 499 aa14.88□□□□□ -0.03
SMG6-220ENST00000576218 MLNP12872 115 aa14.88□□□□□ -0.03
SMG6-220ENST00000576218 TSPAN7P41732 249 aa14.88□□□□□ -0.03
SMG6-220ENST00000576218 MAGEA6P43360 314 aa14.88□□□□□ -0.03
SMG6-220ENST00000576218 CD151P48509 253 aa14.88□□□□□ -0.03
SMG6-220ENST00000576218 ATP1A2P50993 1020 aa14.88□□□□□ -0.03
SMG6-220ENST00000576218 EIF3BP55884 814 aaKnown RBP14.88□□□□□ -0.03
SMG6-220ENST00000576218 TLE3Q04726 772 aa14.88□□□□□ -0.03
SMG6-220ENST00000576218 THOC5Q13769 683 aaKnown RBP14.88□□□□□ -0.03
SMG6-220ENST00000576218 DHX34Q14147 1143 aaKnown RBP14.88□□□□□ -0.03
SMG6-220ENST00000576218 RNF187Q5TA31 235 aaPredicted RBP14.88□□□□□ -0.03
SMG6-220ENST00000576218 PAPD7Q5XG87 772 aaKnown RBP14.88□□□□□ -0.03
SMG6-220ENST00000576218 ANKS6Q68DC2 871 aa14.88□□□□□ -0.03
SMG6-220ENST00000576218 CYB5D1Q6P9G0 228 aa14.88□□□□□ -0.03
SMG6-220ENST00000576218 CEACAM20Q6UY09 585 aa14.88□□□□□ -0.03
SMG6-220ENST00000576218 NAPRTQ6XQN6 538 aa14.88□□□□□ -0.03
SMG6-220ENST00000576218 ARHGAP22Q7Z5H3 698 aa14.88□□□□□ -0.03
SMG6-220ENST00000576218 PCGF5Q86SE9 256 aa14.88□□□□□ -0.03
SMG6-220ENST00000576218 PDZD3Q86UT5 571 aa14.88□□□□□ -0.03
SMG6-220ENST00000576218 HOOK3Q86VS8 718 aa14.88□□□□□ -0.03
SMG6-220ENST00000576218 ZFAND4Q86XD8 727 aa14.88□□□□□ -0.03
SMG6-220ENST00000576218 MCUQ8NE86 351 aa14.88□□□□□ -0.03
SMG6-220ENST00000576218 ACVR1CQ8NER5 493 aa14.88□□□□□ -0.03
SMG6-220ENST00000576218 SKA2Q8WVK7 121 aaPredicted RBP14.88□□□□□ -0.03
SMG6-220ENST00000576218 TFGQ92734 400 aaPredicted RBP14.88□□□□□ -0.03
SMG6-220ENST00000576218 FCRL3Q96P31 734 aaPredicted RBP14.88□□□□□ -0.03
SMG6-220ENST00000576218 SERPINB12Q96P63 405 aa14.88□□□□□ -0.03
SMG6-220ENST00000576218 TEFMQ96QE5 360 aaKnown RBP14.88□□□□□ -0.03
SMG6-220ENST00000576218 PANX3Q96QZ0 392 aa14.88□□□□□ -0.03
SMG6-220ENST00000576218 CTRCQ99895 268 aa14.88□□□□□ -0.03
SMG6-220ENST00000576218 DDA1Q9BW61 102 aa14.88□□□□□ -0.03
SMG6-220ENST00000576218 MVB12BQ9H7P6 319 aa14.88□□□□□ -0.03
SMG6-220ENST00000576218 TREX1Q9NSU2 369 aa14.88□□□□□ -0.03
SMG6-220ENST00000576218 HRASLS2Q9NWW9 162 aa14.88□□□□□ -0.03
SMG6-220ENST00000576218 PDP2Q9P2J9 529 aa14.88□□□□□ -0.03
SMG6-220ENST00000576218 ASF1AQ9Y294 204 aa14.88□□□□□ -0.03
SMG6-220ENST00000576218 MAGEB16A2A368 324 aa14.87□□□□□ -0.03
SMG6-220ENST00000576218 OR5K3A6NET4 321 aa14.87□□□□□ -0.03
SMG6-220ENST00000576218 C9orf172C9J069 976 aa14.87□□□□□ -0.03
SMG6-220ENST00000576218 GOLGA8KD6RF30 607 aa14.87□□□□□ -0.03
SMG6-220ENST00000576218 GOLGA8TH3BQL2 631 aa14.87□□□□□ -0.03
SMG6-220ENST00000576218 POLR1CO15160 346 aaPredicted RBP14.87□□□□□ -0.03
SMG6-220ENST00000576218 TOX3O15405 576 aaPredicted RBP14.87□□□□□ -0.03
SMG6-220ENST00000576218 C9P02748 559 aa14.87□□□□□ -0.03
SMG6-220ENST00000576218 ANKRD34CP0C6C1 535 aa14.87□□□□□ -0.03
SMG6-220ENST00000576218 PDHA2P29803 388 aa14.87□□□□□ -0.03
SMG6-220ENST00000576218 CASQ1P31415 396 aa14.87□□□□□ -0.03
SMG6-220ENST00000576218 ARCN1P48444 511 aaKnown RBP14.87□□□□□ -0.03
SMG6-220ENST00000576218 DR1Q01658 176 aa14.87□□□□□ -0.03
SMG6-220ENST00000576218 HSPA14Q0VDF9 509 aa14.87□□□□□ -0.03
SMG6-220ENST00000576218 PRKG2Q13237 762 aa14.87□□□□□ -0.03
SMG6-220ENST00000576218 SEMA3AQ14563 771 aa14.87□□□□□ -0.03
SMG6-220ENST00000576218 MANEAQ5SRI9 462 aa14.87□□□□□ -0.03
SMG6-220ENST00000576218 CAPRIN2Q6IMN6 1127 aaKnown RBP14.87□□□□□ -0.03
SMG6-220ENST00000576218 CCDC81Q6ZN84 652 aa14.87□□□□□ -0.03
SMG6-220ENST00000576218 PHC3Q8NDX5 983 aa14.87□□□□□ -0.03
SMG6-220ENST00000576218 OR4E2Q8NGC2 313 aa14.87□□□□□ -0.03
SMG6-220ENST00000576218 SGSM3Q96HU1 749 aa14.87□□□□□ -0.03
SMG6-220ENST00000576218 OR52A5Q9H2C5 316 aa14.87□□□□□ -0.03
SMG6-220ENST00000576218 TRIT1Q9H3H1 467 aaKnown RBP14.87□□□□□ -0.03
SMG6-220ENST00000576218 SOHLH2Q9NX45 425 aa14.87□□□□□ -0.03
SMG6-220ENST00000576218 MARCH4Q9P2E8 410 aaPredicted RBP14.87□□□□□ -0.03
SMG6-220ENST00000576218 TDRKHQ9Y2W6 561 aaKnown RBP14.87□□□□□ -0.03
SMG6-220ENST00000576218 B3GALT1Q9Y5Z6 326 aa14.87□□□□□ -0.03
SMG6-220ENST00000576218 RPS6KL1Q9Y6S9 549 aa14.87□□□□□ -0.03
SMG6-220ENST00000576218 ZZEF1O43149 2961 aa14.87□□□□□ -0.03
SMG6-220ENST00000576218 DSPP15924 2871 aaKnown RBP14.87□□□□□ -0.03
SMG6-220ENST00000576218 MAP3K7O43318 606 aa14.86□□□□□ -0.03
SMG6-220ENST00000576218 KIF1CO43896 1103 aaKnown RBP14.86□□□□□ -0.03
SMG6-220ENST00000576218 POLR2CP19387 275 aaPredicted RBP14.86□□□□□ -0.03
SMG6-220ENST00000576218 CLN3Q13286 438 aa14.86□□□□□ -0.03
SMG6-220ENST00000576218 PTK6Q13882 451 aa14.86□□□□□ -0.03
SMG6-220ENST00000576218 DNAJC21Q5F1R6 531 aaKnown RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms