RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 GPR33Q49SQ1 333 aa7.74□□□□□ -1.17
CCDC40-215ENST00000576033 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.74□□□□□ -1.17
CCDC40-215ENST00000576033 STEAP4Q687X5 459 aa7.74□□□□□ -1.17
CCDC40-215ENST00000576033 OGFOD3Q6PK18 319 aa7.74□□□□□ -1.17
CCDC40-215ENST00000576033 PACS1Q6VY07 963 aa7.74□□□□□ -1.17
CCDC40-215ENST00000576033 SPRED1Q7Z699 444 aa7.74□□□□□ -1.17
CCDC40-215ENST00000576033 RAB44Q7Z6P3 723 aaPredicted RBP7.74□□□□□ -1.17
CCDC40-215ENST00000576033 AMZ2Q86W34 360 aa7.74□□□□□ -1.17
CCDC40-215ENST00000576033 CILP2Q8IUL8 1156 aa7.74□□□□□ -1.17
CCDC40-215ENST00000576033 CFAP206Q8IYR0 622 aa7.74□□□□□ -1.17
CCDC40-215ENST00000576033 RIBC1Q8N443 379 aaPredicted RBP7.74□□□□□ -1.17
CCDC40-215ENST00000576033 SFRP1Q8N474 314 aa7.74□□□□□ -1.17
CCDC40-215ENST00000576033 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.74□□□□□ -1.17
CCDC40-215ENST00000576033 MAPK15Q8TD08 544 aa7.74□□□□□ -1.17
CCDC40-215ENST00000576033 ELMO1Q92556 727 aa7.74□□□□□ -1.17
CCDC40-215ENST00000576033 CERS2Q96G23 380 aa7.74□□□□□ -1.17
CCDC40-215ENST00000576033 BIRC8Q96P09 236 aa7.74□□□□□ -1.17
CCDC40-215ENST00000576033 INSM2Q96T92 566 aaPredicted RBP7.74□□□□□ -1.17
CCDC40-215ENST00000576033 CDC6Q99741 560 aa7.74□□□□□ -1.17
CCDC40-215ENST00000576033 NUDT22Q9BRQ3 303 aa7.74□□□□□ -1.17
CCDC40-215ENST00000576033 DUSP23Q9BVJ7 150 aa7.74□□□□□ -1.17
CCDC40-215ENST00000576033 SCNM1Q9BWG6 230 aa7.74□□□□□ -1.17
CCDC40-215ENST00000576033 ZCCHC2Q9C0B9 1178 aaKnown RBP7.74□□□□□ -1.17
CCDC40-215ENST00000576033 RMI1Q9H9A7 625 aa7.74□□□□□ -1.17
CCDC40-215ENST00000576033 COG4Q9H9E3 785 aa7.74□□□□□ -1.17
CCDC40-215ENST00000576033 PPCSQ9HAB8 311 aa7.74□□□□□ -1.17
CCDC40-215ENST00000576033 SARS2Q9NP81 518 aaKnown RBP7.74□□□□□ -1.17
CCDC40-215ENST00000576033 IMP3Q9NV31 184 aaKnown RBP7.74□□□□□ -1.17
CCDC40-215ENST00000576033 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.74□□□□□ -1.17
CCDC40-215ENST00000576033 LRIT1Q9P2V4 623 aa7.74□□□□□ -1.17
CCDC40-215ENST00000576033 ZC3H7BQ9UGR2 993 aaKnown RBP7.74□□□□□ -1.17
CCDC40-215ENST00000576033 CDYLQ9Y232 598 aa7.74□□□□□ -1.17
CCDC40-215ENST00000576033 DMXL2Q8TDJ6 3036 aa7.73□□□□□ -1.17
CCDC40-215ENST00000576033 GOLGA6L10A6NI86 522 aa7.73□□□□□ -1.17
CCDC40-215ENST00000576033 SRRM3A6NNA2 597 aaPredicted RBP7.73□□□□□ -1.17
CCDC40-215ENST00000576033 RASGRF2O14827 1237 aa7.73□□□□□ -1.17
CCDC40-215ENST00000576033 B4GAT1O43505 415 aa7.73□□□□□ -1.17
CCDC40-215ENST00000576033 FAM155BO75949 473 aa7.73□□□□□ -1.17
CCDC40-215ENST00000576033 HAUS5O94927 633 aa7.73□□□□□ -1.17
CCDC40-215ENST00000576033 TRIM16O95361 564 aa7.73□□□□□ -1.17
CCDC40-215ENST00000576033 ACSL3O95573 720 aa7.73□□□□□ -1.17
CCDC40-215ENST00000576033 S1PR4O95977 384 aa7.73□□□□□ -1.17
CCDC40-215ENST00000576033 ADRB1P08588 477 aa7.73□□□□□ -1.17
CCDC40-215ENST00000576033 HGFP14210 728 aa7.73□□□□□ -1.17
CCDC40-215ENST00000576033 HOXB3P14651 431 aaPredicted RBP7.73□□□□□ -1.17
CCDC40-215ENST00000576033 TYRP1P17643 537 aa7.73□□□□□ -1.17
CCDC40-215ENST00000576033 NR1D1P20393 614 aa7.73□□□□□ -1.17
CCDC40-215ENST00000576033 GCAP28676 217 aa7.73□□□□□ -1.17
CCDC40-215ENST00000576033 PMLP29590 882 aa7.73□□□□□ -1.17
CCDC40-215ENST00000576033 ALDH4A1P30038 563 aa7.73□□□□□ -1.17
CCDC40-215ENST00000576033 NSG1P42857 185 aa7.73□□□□□ -1.17
CCDC40-215ENST00000576033 BDKRB1P46663 353 aa7.73□□□□□ -1.17
CCDC40-215ENST00000576033 CDKN2DP55273 166 aa7.73□□□□□ -1.17
CCDC40-215ENST00000576033 GFERP55789 205 aa7.73□□□□□ -1.17
CCDC40-215ENST00000576033 HHEXQ03014 270 aa7.73□□□□□ -1.17
CCDC40-215ENST00000576033 DMPKQ09013 629 aa7.73□□□□□ -1.17
CCDC40-215ENST00000576033 LRP8Q14114 963 aa7.73□□□□□ -1.17
CCDC40-215ENST00000576033 GPR18Q14330 331 aa7.73□□□□□ -1.17
CCDC40-215ENST00000576033 ZNF460Q14592 562 aa7.73□□□□□ -1.17
CCDC40-215ENST00000576033 ITIH4Q14624 930 aa7.73□□□□□ -1.17
CCDC40-215ENST00000576033 RPE65Q16518 533 aa7.73□□□□□ -1.17
CCDC40-215ENST00000576033 TUBB8Q3ZCM7 444 aa7.73□□□□□ -1.17
CCDC40-215ENST00000576033 CCSMST1Q4G0I0 132 aa7.73□□□□□ -1.17
CCDC40-215ENST00000576033 DNAJC21Q5F1R6 531 aaKnown RBP7.73□□□□□ -1.17
CCDC40-215ENST00000576033 SPANXN3Q5MJ09 141 aa7.73□□□□□ -1.17
CCDC40-215ENST00000576033 NEPROQ6NW34 567 aa7.73□□□□□ -1.17
CCDC40-215ENST00000576033 IYDQ6PHW0 289 aa7.73□□□□□ -1.17
CCDC40-215ENST00000576033 NLRP9Q7RTR0 991 aa7.73□□□□□ -1.17
CCDC40-215ENST00000576033 ZNF438Q7Z4V0 828 aa7.73□□□□□ -1.17
CCDC40-215ENST00000576033 CCNJLQ8IV13 435 aa7.73□□□□□ -1.17
CCDC40-215ENST00000576033 PDIK1LQ8N165 341 aa7.73□□□□□ -1.17
CCDC40-215ENST00000576033 SIDT2Q8NBJ9 832 aaKnown RBP7.73□□□□□ -1.17
CCDC40-215ENST00000576033 RCBTB1Q8NDN9 531 aa7.73□□□□□ -1.17
CCDC40-215ENST00000576033 PHC3Q8NDX5 983 aa7.73□□□□□ -1.17
CCDC40-215ENST00000576033 OR2L2Q8NH16 312 aa7.73□□□□□ -1.17
CCDC40-215ENST00000576033 UHMK1Q8TAS1 419 aaKnown RBP7.73□□□□□ -1.17
CCDC40-215ENST00000576033 HM13Q8TCT9 377 aa7.73□□□□□ -1.17
CCDC40-215ENST00000576033 EPS8L3Q8TE67 593 aaKnown RBP7.73□□□□□ -1.17
CCDC40-215ENST00000576033 RSC1A1Q92681 617 aa7.73□□□□□ -1.17
CCDC40-215ENST00000576033 PMEPA1Q969W9 287 aa7.73□□□□□ -1.17
CCDC40-215ENST00000576033 LRRC39Q96DD0 335 aa7.73□□□□□ -1.17
CCDC40-215ENST00000576033 C12orf66Q96MD2 445 aa7.73□□□□□ -1.17
CCDC40-215ENST00000576033 PPM1MQ96MI6 270 aa7.73□□□□□ -1.17
CCDC40-215ENST00000576033 HGH1Q9BTY7 390 aa7.73□□□□□ -1.17
CCDC40-215ENST00000576033 DHRS4Q9BTZ2 278 aa7.73□□□□□ -1.17
CCDC40-215ENST00000576033 OR52A5Q9H2C5 316 aa7.73□□□□□ -1.17
CCDC40-215ENST00000576033 SEMA6CQ9H3T2 930 aa7.73□□□□□ -1.17
CCDC40-215ENST00000576033 PPANQ9NQ55 473 aaKnown RBP7.73□□□□□ -1.17
CCDC40-215ENST00000576033 CPNE7Q9UBL6 633 aa7.73□□□□□ -1.17
CCDC40-215ENST00000576033 FAM169AQ9Y6X4 670 aa7.73□□□□□ -1.17
CCDC40-215ENST00000576033 UNC13CQ8NB66 2214 aa7.72□□□□□ -1.17
CCDC40-215ENST00000576033 USP24Q9UPU5 2620 aa7.72□□□□□ -1.17
CCDC40-215ENST00000576033 A0A087WUV0 522 aaPredicted RBP7.72□□□□□ -1.17
CCDC40-215ENST00000576033 SLC5A10A0PJK1 596 aa7.72□□□□□ -1.17
CCDC40-215ENST00000576033 MGAT4DA6NG13 374 aa7.72□□□□□ -1.17
CCDC40-215ENST00000576033 RHPN2P1A8MT19 583 aa7.72□□□□□ -1.17
CCDC40-215ENST00000576033 CFAP99D6REC4 459 aa7.72□□□□□ -1.17
CCDC40-215ENST00000576033 PRMT5O14744 637 aaPredicted RBP7.72□□□□□ -1.17
CCDC40-215ENST00000576033 NDUFS3O75489 264 aa7.72□□□□□ -1.17
CCDC40-215ENST00000576033 SPAG6O75602 509 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms