RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 C5orf60A6NFR6 353 aa9.46□□□□□ -0.9
NPLOC4-216ENST00000574344 ZNF891A8MT65 544 aaPredicted RBP9.46□□□□□ -0.9
NPLOC4-216ENST00000574344 CFAP99D6REC4 459 aa9.46□□□□□ -0.9
NPLOC4-216ENST00000574344 GAPDHSO14556 408 aaPredicted RBP9.46□□□□□ -0.9
NPLOC4-216ENST00000574344 SRP72O76094 671 aaKnown RBP9.46□□□□□ -0.9
NPLOC4-216ENST00000574344 STK17BO94768 372 aa9.46□□□□□ -0.9
NPLOC4-216ENST00000574344 C9P02748 559 aa9.46□□□□□ -0.9
NPLOC4-216ENST00000574344 ANKRD34CP0C6C1 535 aa9.46□□□□□ -0.9
NPLOC4-216ENST00000574344 SLC35G4P0C7Q5 338 aa9.46□□□□□ -0.9
NPLOC4-216ENST00000574344 FAM87AP0C7U9 286 aa9.46□□□□□ -0.9
NPLOC4-216ENST00000574344 PLA2G2AP14555 144 aa9.46□□□□□ -0.9
NPLOC4-216ENST00000574344 WT1P19544 449 aaPredicted RBP9.46□□□□□ -0.9
NPLOC4-216ENST00000574344 ITGALP20701 1170 aa9.46□□□□□ -0.9
NPLOC4-216ENST00000574344 HADHAP40939 763 aa9.46□□□□□ -0.9
NPLOC4-216ENST00000574344 LEPRP48357 1165 aaKnown RBP9.46□□□□□ -0.9
NPLOC4-216ENST00000574344 CARSP49589 748 aaKnown RBP9.46□□□□□ -0.9
NPLOC4-216ENST00000574344 CYP1B1Q16678 543 aa9.46□□□□□ -0.9
NPLOC4-216ENST00000574344 CYB5D1Q6P9G0 228 aa9.46□□□□□ -0.9
NPLOC4-216ENST00000574344 KLHL35Q6PF15 583 aa9.46□□□□□ -0.9
NPLOC4-216ENST00000574344 FAM83HQ6ZRV2 1179 aaPredicted RBP9.46□□□□□ -0.9
NPLOC4-216ENST00000574344 ZNF771Q7L3S4 317 aaPredicted RBP9.46□□□□□ -0.9
NPLOC4-216ENST00000574344 PRICKLE2Q7Z3G6 844 aa9.46□□□□□ -0.9
NPLOC4-216ENST00000574344 CROCCP2Q86T23 111 aa9.46□□□□□ -0.9
NPLOC4-216ENST00000574344 TTC13Q8NBP0 860 aa9.46□□□□□ -0.9
NPLOC4-216ENST00000574344 OR13C4Q8NGS5 318 aa9.46□□□□□ -0.9
NPLOC4-216ENST00000574344 DTX3LQ8TDB6 740 aa9.46□□□□□ -0.9
NPLOC4-216ENST00000574344 NAT14Q8WUY8 206 aa9.46□□□□□ -0.9
NPLOC4-216ENST00000574344 ZDHHC12Q96GR4 267 aa9.46□□□□□ -0.9
NPLOC4-216ENST00000574344 ELMO2Q96JJ3 720 aa9.46□□□□□ -0.9
NPLOC4-216ENST00000574344 C12orf66Q96MD2 445 aa9.46□□□□□ -0.9
NPLOC4-216ENST00000574344 OR6C1Q96RD1 312 aa9.46□□□□□ -0.9
NPLOC4-216ENST00000574344 ERP44Q9BS26 406 aa9.46□□□□□ -0.9
NPLOC4-216ENST00000574344 FAM117AQ9C073 453 aa9.46□□□□□ -0.9
NPLOC4-216ENST00000574344 TSPYL1Q9H0U9 437 aa9.46□□□□□ -0.9
NPLOC4-216ENST00000574344 DPH5Q9H2P9 285 aa9.46□□□□□ -0.9
NPLOC4-216ENST00000574344 TRIT1Q9H3H1 467 aaKnown RBP9.46□□□□□ -0.9
NPLOC4-216ENST00000574344 SMOXQ9NWM0 555 aa9.46□□□□□ -0.9
NPLOC4-216ENST00000574344 PILRAQ9UKJ1 303 aa9.46□□□□□ -0.9
NPLOC4-216ENST00000574344 KCTD3Q9Y597 815 aa9.46□□□□□ -0.9
NPLOC4-216ENST00000574344 PRR19A6NJB7 356 aa9.45□□□□□ -0.9
NPLOC4-216ENST00000574344 B8ZZF3 427 aa9.45□□□□□ -0.9
NPLOC4-216ENST00000574344 H3BQF6 201 aa9.45□□□□□ -0.9
NPLOC4-216ENST00000574344 TOX3O15405 576 aaPredicted RBP9.45□□□□□ -0.9
NPLOC4-216ENST00000574344 SLC28A2O43868 658 aa9.45□□□□□ -0.9
NPLOC4-216ENST00000574344 KIF1CO43896 1103 aaKnown RBP9.45□□□□□ -0.9
NPLOC4-216ENST00000574344 PRKAR1AP10644 381 aa9.45□□□□□ -0.9
NPLOC4-216ENST00000574344 MTHFD1P11586 935 aaKnown RBP9.45□□□□□ -0.9
NPLOC4-216ENST00000574344 MAP4P27816 1152 aaKnown RBP9.45□□□□□ -0.9
NPLOC4-216ENST00000574344 CA5AP35218 305 aa9.45□□□□□ -0.9
NPLOC4-216ENST00000574344 ADRA1AP35348 466 aa9.45□□□□□ -0.9
NPLOC4-216ENST00000574344 COILP38432 576 aaPredicted RBP9.45□□□□□ -0.9
NPLOC4-216ENST00000574344 ARL4DP49703 201 aa9.45□□□□□ -0.9
NPLOC4-216ENST00000574344 SH3BP2P78314 561 aa9.45□□□□□ -0.9
NPLOC4-216ENST00000574344 MRPS25P82663 173 aaKnown RBP9.45□□□□□ -0.9
NPLOC4-216ENST00000574344 CAV1Q03135 178 aa9.45□□□□□ -0.9
NPLOC4-216ENST00000574344 DMPKQ09013 629 aa9.45□□□□□ -0.9
NPLOC4-216ENST00000574344 KRT33BQ14525 404 aa9.45□□□□□ -0.9
NPLOC4-216ENST00000574344 RPE65Q16518 533 aa9.45□□□□□ -0.9
NPLOC4-216ENST00000574344 TBR1Q16650 682 aa9.45□□□□□ -0.9
NPLOC4-216ENST00000574344 LINC00303Q3SY05 128 aa9.45□□□□□ -0.9
NPLOC4-216ENST00000574344 ZRANB3Q5FWF4 1079 aa9.45□□□□□ -0.9
NPLOC4-216ENST00000574344 ARMC6Q6NXE6 501 aa9.45□□□□□ -0.9
NPLOC4-216ENST00000574344 DUS1LQ6P1R4 473 aaKnown RBP9.45□□□□□ -0.9
NPLOC4-216ENST00000574344 LRIG3Q6UXM1 1119 aa9.45□□□□□ -0.9
NPLOC4-216ENST00000574344 RANBP10Q6VN20 620 aa9.45□□□□□ -0.9
NPLOC4-216ENST00000574344 PRSS42Q7Z5A4 293 aa9.45□□□□□ -0.9
NPLOC4-216ENST00000574344 HOOK3Q86VS8 718 aa9.45□□□□□ -0.9
NPLOC4-216ENST00000574344 UNC5BQ8IZJ1 945 aa9.45□□□□□ -0.9
NPLOC4-216ENST00000574344 TAB3Q8N5C8 712 aaPredicted RBP9.45□□□□□ -0.9
NPLOC4-216ENST00000574344 FAM71DQ8N9W8 422 aa9.45□□□□□ -0.9
NPLOC4-216ENST00000574344 SIDT2Q8NBJ9 832 aaKnown RBP9.45□□□□□ -0.9
NPLOC4-216ENST00000574344 FAM76AQ8TAV0 307 aa9.45□□□□□ -0.9
NPLOC4-216ENST00000574344 UBLCP1Q8WVY7 318 aaPredicted RBP9.45□□□□□ -0.9
NPLOC4-216ENST00000574344 SEC14L1Q92503 715 aa9.45□□□□□ -0.9
NPLOC4-216ENST00000574344 SLCO2A1Q92959 643 aa9.45□□□□□ -0.9
NPLOC4-216ENST00000574344 ULK4Q96C45 1275 aa9.45□□□□□ -0.9
NPLOC4-216ENST00000574344 STAMBPL1Q96FJ0 436 aa9.45□□□□□ -0.9
NPLOC4-216ENST00000574344 TRIM51Q9BSJ1 452 aa9.45□□□□□ -0.9
NPLOC4-216ENST00000574344 EFHD1Q9BUP0 239 aa9.45□□□□□ -0.9
NPLOC4-216ENST00000574344 WWP1Q9H0M0 922 aa9.45□□□□□ -0.9
NPLOC4-216ENST00000574344 ZNF768Q9H5H4 540 aaKnown RBP9.45□□□□□ -0.9
NPLOC4-216ENST00000574344 FAM96AQ9H5X1 160 aa9.45□□□□□ -0.9
NPLOC4-216ENST00000574344 LRRC40Q9H9A6 602 aa9.45□□□□□ -0.9
NPLOC4-216ENST00000574344 SIDT1Q9NXL6 827 aaKnown RBP9.45□□□□□ -0.9
NPLOC4-216ENST00000574344 LNPEPQ9UIQ6 1025 aa9.45□□□□□ -0.9
NPLOC4-216ENST00000574344 DNMT3AQ9Y6K1 912 aaPredicted RBP9.45□□□□□ -0.9
NPLOC4-216ENST00000574344 TENM4Q6N022 2769 aa9.45□□□□□ -0.9
NPLOC4-216ENST00000574344 LOC101059948A0A1B0GTJ6 334 aa9.44□□□□□ -0.9
NPLOC4-216ENST00000574344 UBA6A0AVT1 1052 aaPredicted RBP9.44□□□□□ -0.9
NPLOC4-216ENST00000574344 KLHL33A6NCF5 533 aa9.44□□□□□ -0.9
NPLOC4-216ENST00000574344 MGAT4DA6NG13 374 aa9.44□□□□□ -0.9
NPLOC4-216ENST00000574344 J3QKU1 62 aa9.44□□□□□ -0.9
NPLOC4-216ENST00000574344 CCL22O00626 93 aa9.44□□□□□ -0.9
NPLOC4-216ENST00000574344 KIAA0754O94854 1291 aa9.44□□□□□ -0.9
NPLOC4-216ENST00000574344 ZIC2O95409 532 aaPredicted RBP9.44□□□□□ -0.9
NPLOC4-216ENST00000574344 POLBP06746 335 aa9.44□□□□□ -0.9
NPLOC4-216ENST00000574344 SFTPCP11686 197 aa9.44□□□□□ -0.9
NPLOC4-216ENST00000574344 MC4RP32245 332 aa9.44□□□□□ -0.9
NPLOC4-216ENST00000574344 ZNF140P52738 457 aaPredicted RBP9.44□□□□□ -0.9
NPLOC4-216ENST00000574344 EIF3BP55884 814 aaKnown RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms