RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 PCBP2Q15366 365 aaKnown RBP eCLIP18.75■□□□□ 0.59
SCARF1-206ENST00000573852 LDLRAP1Q5SW96 308 aa18.75■□□□□ 0.59
SCARF1-206ENST00000573852 GRAMD4Q6IC98 578 aa18.75■□□□□ 0.59
SCARF1-206ENST00000573852 PJA1Q8NG27 643 aa18.75■□□□□ 0.59
SCARF1-206ENST00000573852 GTF2H4Q92759 462 aa18.75■□□□□ 0.59
SCARF1-206ENST00000573852 RDH12Q96NR8 316 aa18.75■□□□□ 0.59
SCARF1-206ENST00000573852 FEM1AQ9BSK4 669 aa18.75■□□□□ 0.59
SCARF1-206ENST00000573852 DGCR6LQ9BY27 220 aa18.75■□□□□ 0.59
SCARF1-206ENST00000573852 RAD21L1Q9H4I0 556 aa18.75■□□□□ 0.59
SCARF1-206ENST00000573852 ARMC7Q9H6L4 198 aa18.75■□□□□ 0.59
SCARF1-206ENST00000573852 WARS2Q9UGM6 360 aaKnown RBP18.75■□□□□ 0.59
SCARF1-206ENST00000573852 ARIH1Q9Y4X5 557 aaPredicted RBP18.75■□□□□ 0.59
SCARF1-206ENST00000573852 RAI2Q9Y5P3 530 aa18.75■□□□□ 0.59
SCARF1-206ENST00000573852 C16orf96A6NNT2 1141 aa18.75■□□□□ 0.59
SCARF1-206ENST00000573852 CFAP99D6REC4 459 aa18.75■□□□□ 0.59
SCARF1-206ENST00000573852 TBC1D4O60343 1298 aa18.75■□□□□ 0.59
SCARF1-206ENST00000573852 CLCN4P51793 760 aa18.75■□□□□ 0.59
SCARF1-206ENST00000573852 RPS24P62847 133 aaKnown RBP18.75■□□□□ 0.59
SCARF1-206ENST00000573852 DSC1Q08554 894 aa18.75■□□□□ 0.59
SCARF1-206ENST00000573852 CTXN3Q4LDR2 81 aa18.75■□□□□ 0.59
SCARF1-206ENST00000573852 SLC16A12Q6ZSM3 486 aa18.75■□□□□ 0.59
SCARF1-206ENST00000573852 TAS2R42Q7RTR8 314 aa18.75■□□□□ 0.59
SCARF1-206ENST00000573852 TMEM179BQ7Z7N9 219 aa18.75■□□□□ 0.59
SCARF1-206ENST00000573852 AADATQ8N5Z0 425 aa18.75■□□□□ 0.59
SCARF1-206ENST00000573852 SLC13A3Q8WWT9 602 aa18.75■□□□□ 0.59
SCARF1-206ENST00000573852 SLC47A1Q96FL8 570 aa18.75■□□□□ 0.59
SCARF1-206ENST00000573852 MAGED4Q96JG8 741 aa18.75■□□□□ 0.59
SCARF1-206ENST00000573852 TBCDQ9BTW9 1192 aa18.75■□□□□ 0.59
SCARF1-206ENST00000573852 ERGIC3Q9Y282 383 aa18.75■□□□□ 0.59
SCARF1-206ENST00000573852 ANKRD66B4E2M5 251 aa18.74■□□□□ 0.59
SCARF1-206ENST00000573852 TLR5O60602 858 aa18.74■□□□□ 0.59
SCARF1-206ENST00000573852 TSPAN3O60637 253 aa18.74■□□□□ 0.59
SCARF1-206ENST00000573852 PRKACGP22612 351 aa18.74■□□□□ 0.59
SCARF1-206ENST00000573852 PIK3CGP48736 1102 aa18.74■□□□□ 0.59
SCARF1-206ENST00000573852 OXCT1P55809 520 aa18.74■□□□□ 0.59
SCARF1-206ENST00000573852 RPL38P63173 70 aaKnown RBP18.74■□□□□ 0.59
SCARF1-206ENST00000573852 CYP4F3Q08477 520 aa18.74■□□□□ 0.59
SCARF1-206ENST00000573852 TRAF3Q13114 568 aa18.74■□□□□ 0.59
SCARF1-206ENST00000573852 ITGADQ13349 1161 aa18.74■□□□□ 0.59
SCARF1-206ENST00000573852 SPESP1Q6UW49 350 aa18.74■□□□□ 0.59
SCARF1-206ENST00000573852 SBSNQ6UWP8 590 aa18.74■□□□□ 0.59
SCARF1-206ENST00000573852 FRA10AC1Q70Z53 315 aa18.74■□□□□ 0.59
SCARF1-206ENST00000573852 IGFN1Q86VF2 1251 aa18.74■□□□□ 0.59
SCARF1-206ENST00000573852 MSRB3Q8IXL7 192 aa18.74■□□□□ 0.59
SCARF1-206ENST00000573852 ZNF555Q8NEP9 628 aa18.74■□□□□ 0.59
SCARF1-206ENST00000573852 CCDC97Q96F63 343 aaPredicted RBP18.74■□□□□ 0.59
SCARF1-206ENST00000573852 IPPKQ9H8X2 491 aa18.74■□□□□ 0.59
SCARF1-206ENST00000573852 ACTR8Q9H981 624 aa18.74■□□□□ 0.59
SCARF1-206ENST00000573852 SLC25A37Q9NYZ2 338 aa18.74■□□□□ 0.59
SCARF1-206ENST00000573852 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.74■□□□□ 0.59
SCARF1-206ENST00000573852 AGO1Q9UL18 857 aaKnown RBP18.74■□□□□ 0.59
SCARF1-206ENST00000573852 DGKBQ9Y6T7 804 aa18.74■□□□□ 0.59
SCARF1-206ENST00000573852 VWA8A3KMH1 1905 aa18.74■□□□□ 0.59
SCARF1-206ENST00000573852 H3BNC9 293 aa18.74■□□□□ 0.59
SCARF1-206ENST00000573852 AXIN1O15169 862 aa18.74■□□□□ 0.59
SCARF1-206ENST00000573852 STX7O15400 261 aaKnown RBP18.74■□□□□ 0.59
SCARF1-206ENST00000573852 XYLBO75191 536 aa18.74■□□□□ 0.59
SCARF1-206ENST00000573852 BCAS1O75363 584 aaPredicted RBP18.74■□□□□ 0.59
SCARF1-206ENST00000573852 PRKD3O94806 890 aa18.74■□□□□ 0.59
SCARF1-206ENST00000573852 F11P03951 625 aa18.74■□□□□ 0.59
SCARF1-206ENST00000573852 HTR1BP28222 390 aa18.74■□□□□ 0.59
SCARF1-206ENST00000573852 SFSWAPQ12872 951 aaKnown RBP18.74■□□□□ 0.59
SCARF1-206ENST00000573852 FAM174BQ3ZCQ3 159 aa18.74■□□□□ 0.59
SCARF1-206ENST00000573852 CLLU1OSQ5K130 101 aa18.74■□□□□ 0.59
SCARF1-206ENST00000573852 DNAJC14Q6Y2X3 702 aaPredicted RBP18.74■□□□□ 0.59
SCARF1-206ENST00000573852 RTN4RL1Q86UN2 441 aaPredicted RBP18.74■□□□□ 0.59
SCARF1-206ENST00000573852 ABHD11Q8NFV4 315 aa18.74■□□□□ 0.59
SCARF1-206ENST00000573852 TMEM165Q9HC07 324 aa18.74■□□□□ 0.59
SCARF1-206ENST00000573852 EXD2Q9NVH0 621 aa18.74■□□□□ 0.59
SCARF1-206ENST00000573852 GNGT2O14610 69 aa18.73■□□□□ 0.59
SCARF1-206ENST00000573852 PFDN6O15212 129 aa18.73■□□□□ 0.59
SCARF1-206ENST00000573852 INPPL1O15357 1258 aa18.73■□□□□ 0.59
SCARF1-206ENST00000573852 KDELR3O43731 214 aa18.73■□□□□ 0.59
SCARF1-206ENST00000573852 C5orf22Q49AR2 442 aa18.73■□□□□ 0.59
SCARF1-206ENST00000573852 CRTC3Q6UUV7 619 aa18.73■□□□□ 0.59
SCARF1-206ENST00000573852 GLB1LQ6UWU2 654 aa18.73■□□□□ 0.59
SCARF1-206ENST00000573852 SEPT5Q99719 369 aaPredicted RBP18.73■□□□□ 0.59
SCARF1-206ENST00000573852 PAK1IP1Q9NWT1 392 aaPredicted RBP18.73■□□□□ 0.59
SCARF1-206ENST00000573852 USE1Q9NZ43 259 aa18.73■□□□□ 0.59
SCARF1-206ENST00000573852 BRCA2P51587 3418 aa18.73■□□□□ 0.59
SCARF1-206ENST00000573852 ESR1P03372 595 aa18.73■□□□□ 0.59
SCARF1-206ENST00000573852 GGT5P36269 586 aa18.73■□□□□ 0.59
SCARF1-206ENST00000573852 PTGER3P43115 390 aa18.73■□□□□ 0.59
SCARF1-206ENST00000573852 KCNC4Q03721 635 aa18.73■□□□□ 0.59
SCARF1-206ENST00000573852 EGFLAMQ63HQ2 1017 aa18.73■□□□□ 0.59
SCARF1-206ENST00000573852 PIWIL3Q7Z3Z3 882 aaKnown RBP18.73■□□□□ 0.59
SCARF1-206ENST00000573852 MILR1Q7Z6M3 343 aa18.73■□□□□ 0.59
SCARF1-206ENST00000573852 ABI1Q8IZP0 508 aa18.73■□□□□ 0.59
SCARF1-206ENST00000573852 TTC30BQ8N4P2 665 aa18.73■□□□□ 0.59
SCARF1-206ENST00000573852 FRS2Q8WU20 508 aa18.73■□□□□ 0.59
SCARF1-206ENST00000573852 MUL1Q969V5 352 aa18.73■□□□□ 0.59
SCARF1-206ENST00000573852 RHBDF1Q96CC6 855 aa18.73■□□□□ 0.59
SCARF1-206ENST00000573852 CCDC138Q96M89 665 aa18.73■□□□□ 0.59
SCARF1-206ENST00000573852 P2RY12Q9H244 342 aa18.73■□□□□ 0.59
SCARF1-206ENST00000573852 NSUN3Q9H649 340 aaKnown RBP18.73■□□□□ 0.59
SCARF1-206ENST00000573852 FARSBQ9NSD9 589 aaKnown RBP18.73■□□□□ 0.59
SCARF1-206ENST00000573852 DHRS7Q9Y394 339 aa18.73■□□□□ 0.59
SCARF1-206ENST00000573852 TNPO3Q9Y5L0 923 aaKnown RBP18.73■□□□□ 0.59
SCARF1-206ENST00000573852 CXCR6O00574 342 aa18.72■□□□□ 0.59
SCARF1-206ENST00000573852 ACSL4O60488 711 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms