RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 INHBCP55103 352 aa13.25□□□□□ -0.29
RPAIN-213ENST00000573577 EIF3BP55884 814 aaKnown RBP13.25□□□□□ -0.29
RPAIN-213ENST00000573577 TUBB4BP68371 445 aa13.25□□□□□ -0.29
RPAIN-213ENST00000573577 GABREP78334 506 aa13.25□□□□□ -0.29
RPAIN-213ENST00000573577 HHEXQ03014 270 aa13.25□□□□□ -0.29
RPAIN-213ENST00000573577 FASTKD3Q14CZ7 662 aaKnown RBP13.25□□□□□ -0.29
RPAIN-213ENST00000573577 TRADDQ15628 312 aa13.25□□□□□ -0.29
RPAIN-213ENST00000573577 AMZ1Q400G9 498 aa13.25□□□□□ -0.29
RPAIN-213ENST00000573577 SYTL3Q4VX76 610 aa13.25□□□□□ -0.29
RPAIN-213ENST00000573577 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.25□□□□□ -0.29
RPAIN-213ENST00000573577 KIAA0408Q6ZU52 694 aa13.25□□□□□ -0.29
RPAIN-213ENST00000573577 CNTN4Q8IWV2 1026 aa13.25□□□□□ -0.29
RPAIN-213ENST00000573577 RBM12BQ8IXT5 1001 aaKnown RBP13.25□□□□□ -0.29
RPAIN-213ENST00000573577 NAT14Q8WUY8 206 aa13.25□□□□□ -0.29
RPAIN-213ENST00000573577 IFT81Q8WYA0 676 aa13.25□□□□□ -0.29
RPAIN-213ENST00000573577 ELMO1Q92556 727 aa13.25□□□□□ -0.29
RPAIN-213ENST00000573577 LPGAT1Q92604 370 aa13.25□□□□□ -0.29
RPAIN-213ENST00000573577 TMEM159Q96B96 161 aa13.25□□□□□ -0.29
RPAIN-213ENST00000573577 CXorf40BQ96DE9 158 aa13.25□□□□□ -0.29
RPAIN-213ENST00000573577 TMEM74Q96NL1 305 aa13.25□□□□□ -0.29
RPAIN-213ENST00000573577 WDR83Q9BRX9 315 aaKnown RBP13.25□□□□□ -0.29
RPAIN-213ENST00000573577 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.25□□□□□ -0.29
RPAIN-213ENST00000573577 P2RY12Q9H244 342 aa13.25□□□□□ -0.29
RPAIN-213ENST00000573577 COG4Q9H9E3 785 aa13.25□□□□□ -0.29
RPAIN-213ENST00000573577 SARS2Q9NP81 518 aaKnown RBP13.25□□□□□ -0.29
RPAIN-213ENST00000573577 IARS2Q9NSE4 1012 aaKnown RBP13.25□□□□□ -0.29
RPAIN-213ENST00000573577 ZDHHC18Q9NUE0 388 aa13.25□□□□□ -0.29
RPAIN-213ENST00000573577 FAM8A1Q9UBU6 413 aa13.25□□□□□ -0.29
RPAIN-213ENST00000573577 FBXO5Q9UKT4 447 aa13.25□□□□□ -0.29
RPAIN-213ENST00000573577 ATXN7L1Q9ULK2 861 aaPredicted RBP13.25□□□□□ -0.29
RPAIN-213ENST00000573577 SATB2Q9UPW6 733 aa13.25□□□□□ -0.29
RPAIN-213ENST00000573577 RAXQ9Y2V3 346 aa13.25□□□□□ -0.29
RPAIN-213ENST00000573577 ZZEF1O43149 2961 aa13.25□□□□□ -0.29
RPAIN-213ENST00000573577 CCDC187A0A096LP49 1063 aa13.24□□□□□ -0.29
RPAIN-213ENST00000573577 A0A1W2PNU3 283 aaPredicted RBP13.24□□□□□ -0.29
RPAIN-213ENST00000573577 TMX2-CTNND1H3BSU7 103 aa13.24□□□□□ -0.29
RPAIN-213ENST00000573577 IFRD1O00458 451 aaPredicted RBP13.24□□□□□ -0.29
RPAIN-213ENST00000573577 SPAG6O75602 509 aa13.24□□□□□ -0.29
RPAIN-213ENST00000573577 DXOO77932 396 aaKnown RBP13.24□□□□□ -0.29
RPAIN-213ENST00000573577 CPNE6O95741 557 aa13.24□□□□□ -0.29
RPAIN-213ENST00000573577 S1PR4O95977 384 aa13.24□□□□□ -0.29
RPAIN-213ENST00000573577 VIPP01282 170 aa13.24□□□□□ -0.29
RPAIN-213ENST00000573577 CD1CP29017 333 aa13.24□□□□□ -0.29
RPAIN-213ENST00000573577 FMO4P31512 558 aa13.24□□□□□ -0.29
RPAIN-213ENST00000573577 CCKBRP32239 447 aa13.24□□□□□ -0.29
RPAIN-213ENST00000573577 MGAT5Q09328 741 aa13.24□□□□□ -0.29
RPAIN-213ENST00000573577 ILF2Q12905 390 aaKnown RBP13.24□□□□□ -0.29
RPAIN-213ENST00000573577 CTBP1Q13363 440 aa13.24□□□□□ -0.29
RPAIN-213ENST00000573577 TMED2Q15363 201 aa13.24□□□□□ -0.29
RPAIN-213ENST00000573577 CLPPQ16740 277 aaPredicted RBP13.24□□□□□ -0.29
RPAIN-213ENST00000573577 MAP9Q49MG5 647 aa13.24□□□□□ -0.29
RPAIN-213ENST00000573577 C3orf38Q5JPI3 329 aa13.24□□□□□ -0.29
RPAIN-213ENST00000573577 FAM83HQ6ZRV2 1179 aaPredicted RBP13.24□□□□□ -0.29
RPAIN-213ENST00000573577 TMPRSS9Q7Z410 1059 aa13.24□□□□□ -0.29
RPAIN-213ENST00000573577 GALNT7Q86SF2 657 aa13.24□□□□□ -0.29
RPAIN-213ENST00000573577 PIM3Q86V86 326 aa13.24□□□□□ -0.29
RPAIN-213ENST00000573577 DENND6AQ8IWF6 608 aa13.24□□□□□ -0.29
RPAIN-213ENST00000573577 LSMEM2Q8N112 164 aa13.24□□□□□ -0.29
RPAIN-213ENST00000573577 C2CD4AQ8NCU7 369 aaPredicted RBP13.24□□□□□ -0.29
RPAIN-213ENST00000573577 ASZ1Q8WWH4 475 aa13.24□□□□□ -0.29
RPAIN-213ENST00000573577 CDKL2Q92772 493 aa13.24□□□□□ -0.29
RPAIN-213ENST00000573577 LIN37Q96GY3 246 aaPredicted RBP13.24□□□□□ -0.29
RPAIN-213ENST00000573577 FMO2Q99518 471 aa13.24□□□□□ -0.29
RPAIN-213ENST00000573577 SLC38A3Q99624 504 aa13.24□□□□□ -0.29
RPAIN-213ENST00000573577 STRADBQ9C0K7 418 aa13.24□□□□□ -0.29
RPAIN-213ENST00000573577 RDH14Q9HBH5 336 aa13.24□□□□□ -0.29
RPAIN-213ENST00000573577 POT1Q9NUX5 634 aa13.24□□□□□ -0.29
RPAIN-213ENST00000573577 NSMCE4AQ9NXX6 385 aa13.24□□□□□ -0.29
RPAIN-213ENST00000573577 KCNK4Q9NYG8 393 aa13.24□□□□□ -0.29
RPAIN-213ENST00000573577 ZFATQ9P243 1243 aa13.24□□□□□ -0.29
RPAIN-213ENST00000573577 CPNE7Q9UBL6 633 aa13.24□□□□□ -0.29
RPAIN-213ENST00000573577 CRYL1Q9Y2S2 319 aa13.24□□□□□ -0.29
RPAIN-213ENST00000573577 HEBP2Q9Y5Z4 205 aa13.24□□□□□ -0.29
RPAIN-213ENST00000573577 COMMD10Q9Y6G5 202 aa13.24□□□□□ -0.29
RPAIN-213ENST00000573577 ZFC3H1O60293 1989 aaKnown RBP13.23□□□□□ -0.29
RPAIN-213ENST00000573577 IGHV1OR21-1A0A087WYE8 117 aa13.23□□□□□ -0.29
RPAIN-213ENST00000573577 E5RI56 91 aa13.23□□□□□ -0.29
RPAIN-213ENST00000573577 APOA4P06727 396 aa13.23□□□□□ -0.29
RPAIN-213ENST00000573577 RHOXF2BP0C7M4 288 aa13.23□□□□□ -0.29
RPAIN-213ENST00000573577 PKMP14618 531 aaKnown RBP13.23□□□□□ -0.29
RPAIN-213ENST00000573577 BRAFP15056 766 aa13.23□□□□□ -0.29
RPAIN-213ENST00000573577 MAGEA4P43358 317 aa13.23□□□□□ -0.29
RPAIN-213ENST00000573577 LEPRP48357 1165 aaKnown RBP13.23□□□□□ -0.29
RPAIN-213ENST00000573577 CD151P48509 253 aa13.23□□□□□ -0.29
RPAIN-213ENST00000573577 CARSP49589 748 aaKnown RBP13.23□□□□□ -0.29
RPAIN-213ENST00000573577 UBE2IP63279 158 aaKnown RBP13.23□□□□□ -0.29
RPAIN-213ENST00000573577 GPLD1P80108 840 aa13.23□□□□□ -0.29
RPAIN-213ENST00000573577 ZFP36L1Q07352 338 aaKnown RBP13.23□□□□□ -0.29
RPAIN-213ENST00000573577 SQSTM1Q13501 440 aa13.23□□□□□ -0.29
RPAIN-213ENST00000573577 BOP1Q14137 746 aaKnown RBP13.23□□□□□ -0.29
RPAIN-213ENST00000573577 CLCA4Q14CN2 919 aa13.23□□□□□ -0.29
RPAIN-213ENST00000573577 TBC1D25Q3MII6 688 aa13.23□□□□□ -0.29
RPAIN-213ENST00000573577 IGF2-ASQ6U949 168 aa13.23□□□□□ -0.29
RPAIN-213ENST00000573577 CYS1Q717R9 158 aa13.23□□□□□ -0.29
RPAIN-213ENST00000573577 OTOAQ7RTW8 1153 aa13.23□□□□□ -0.29
RPAIN-213ENST00000573577 ZNF761Q86XN6 746 aaPredicted RBP13.23□□□□□ -0.29
RPAIN-213ENST00000573577 SLITRK4Q8IW52 837 aa13.23□□□□□ -0.29
RPAIN-213ENST00000573577 UNC5BQ8IZJ1 945 aa13.23□□□□□ -0.29
RPAIN-213ENST00000573577 WDR36Q8NI36 951 aaKnown RBP13.23□□□□□ -0.29
RPAIN-213ENST00000573577 BIRC8Q96P09 236 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms