RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 TBCDQ9BTW9 1192 aa10.59□□□□□ -0.71
CCDC40-207ENST00000572253 ARMC7Q9H6L4 198 aa10.59□□□□□ -0.71
CCDC40-207ENST00000572253 SCN3BQ9NY72 215 aa10.59□□□□□ -0.71
CCDC40-207ENST00000572253 TPRKBQ9Y3C4 175 aa10.59□□□□□ -0.71
CCDC40-207ENST00000572253 LOC100130705A0A1B0GUX0 176 aa10.59□□□□□ -0.71
CCDC40-207ENST00000572253 THPOP40225 353 aa10.59□□□□□ -0.71
CCDC40-207ENST00000572253 OPRL1P41146 370 aa10.59□□□□□ -0.71
CCDC40-207ENST00000572253 PTGER3P43115 390 aa10.59□□□□□ -0.71
CCDC40-207ENST00000572253 ARHGDIAP52565 204 aa10.59□□□□□ -0.71
CCDC40-207ENST00000572253 GOLGA7Q7Z5G4 137 aa10.59□□□□□ -0.71
CCDC40-207ENST00000572253 ANKRD13BQ86YJ7 626 aa10.59□□□□□ -0.71
CCDC40-207ENST00000572253 ARL10Q8N8L6 244 aa10.59□□□□□ -0.71
CCDC40-207ENST00000572253 PJA1Q8NG27 643 aa10.59□□□□□ -0.71
CCDC40-207ENST00000572253 OR4F6Q8NGB9 312 aa10.59□□□□□ -0.71
CCDC40-207ENST00000572253 SH3YL1Q96HL8 342 aaPredicted RBP10.59□□□□□ -0.71
CCDC40-207ENST00000572253 GIN1Q9NXP7 522 aa10.59□□□□□ -0.71
CCDC40-207ENST00000572253 SLC28A1O00337 649 aa10.58□□□□□ -0.71
CCDC40-207ENST00000572253 SLC1A7O00341 560 aa10.58□□□□□ -0.71
CCDC40-207ENST00000572253 SLC22A1O15245 554 aa10.58□□□□□ -0.71
CCDC40-207ENST00000572253 PRKD3O94806 890 aa10.58□□□□□ -0.71
CCDC40-207ENST00000572253 CNPP09543 421 aaKnown RBP10.58□□□□□ -0.71
CCDC40-207ENST00000572253 CCDC159P0C7I6 412 aa10.58□□□□□ -0.71
CCDC40-207ENST00000572253 GRK4P32298 578 aa10.58□□□□□ -0.71
CCDC40-207ENST00000572253 EIF2B2P49770 351 aaKnown RBP10.58□□□□□ -0.71
CCDC40-207ENST00000572253 RGS4P49798 205 aa10.58□□□□□ -0.71
CCDC40-207ENST00000572253 HK3P52790 923 aa10.58□□□□□ -0.71
CCDC40-207ENST00000572253 SPCS2Q15005 226 aa10.58□□□□□ -0.71
CCDC40-207ENST00000572253 PCBP2Q15366 365 aaKnown RBP eCLIP10.58□□□□□ -0.71
CCDC40-207ENST00000572253 MICU2Q8IYU8 434 aa10.58□□□□□ -0.71
CCDC40-207ENST00000572253 FAM120BQ96EK7 910 aaKnown RBP10.58□□□□□ -0.71
CCDC40-207ENST00000572253 PSKH2Q96QS6 385 aa10.58□□□□□ -0.71
CCDC40-207ENST00000572253 EGFL8Q99944 293 aa10.58□□□□□ -0.71
CCDC40-207ENST00000572253 SPC25Q9HBM1 224 aa10.58□□□□□ -0.71
CCDC40-207ENST00000572253 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.58□□□□□ -0.71
CCDC40-207ENST00000572253 CPA4Q9UI42 421 aa10.58□□□□□ -0.71
CCDC40-207ENST00000572253 TSR3Q9UJK0 312 aaKnown RBP10.58□□□□□ -0.71
CCDC40-207ENST00000572253 BCKDKO14874 412 aa10.58□□□□□ -0.72
CCDC40-207ENST00000572253 LSM1O15116 133 aaKnown RBP10.58□□□□□ -0.72
CCDC40-207ENST00000572253 KDM1AO60341 852 aa10.58□□□□□ -0.72
CCDC40-207ENST00000572253 IL6P05231 212 aa10.58□□□□□ -0.72
CCDC40-207ENST00000572253 NR4A1P22736 598 aa10.58□□□□□ -0.72
CCDC40-207ENST00000572253 IST1P53990 364 aa10.58□□□□□ -0.72
CCDC40-207ENST00000572253 PPP2R2BQ00005 443 aa10.58□□□□□ -0.72
CCDC40-207ENST00000572253 CYP2A13Q16696 494 aa10.58□□□□□ -0.72
CCDC40-207ENST00000572253 MORN1Q5T089 497 aa10.58□□□□□ -0.72
CCDC40-207ENST00000572253 ALG1LQ6GMV1 187 aa10.58□□□□□ -0.72
CCDC40-207ENST00000572253 GDF6Q6KF10 455 aaPredicted RBP10.58□□□□□ -0.72
CCDC40-207ENST00000572253 DNAJC14Q6Y2X3 702 aaPredicted RBP10.58□□□□□ -0.72
CCDC40-207ENST00000572253 LINC00299Q6ZSB3 139 aa10.58□□□□□ -0.72
CCDC40-207ENST00000572253 ZCCHC7Q8N3Z6 543 aaKnown RBP10.58□□□□□ -0.72
CCDC40-207ENST00000572253 ZNF548Q8NEK5 533 aaPredicted RBP10.58□□□□□ -0.72
CCDC40-207ENST00000572253 OR7D4Q8NG98 312 aa10.58□□□□□ -0.72
CCDC40-207ENST00000572253 GLMNQ92990 594 aa10.58□□□□□ -0.72
CCDC40-207ENST00000572253 ABHD8Q96I13 439 aa10.58□□□□□ -0.72
CCDC40-207ENST00000572253 MBOAT4Q96T53 435 aa10.58□□□□□ -0.72
CCDC40-207ENST00000572253 IPPKQ9H8X2 491 aa10.58□□□□□ -0.72
CCDC40-207ENST00000572253 VAPAQ9P0L0 249 aa10.58□□□□□ -0.72
CCDC40-207ENST00000572253 ZMYM5Q9UJ78 669 aa10.58□□□□□ -0.72
CCDC40-207ENST00000572253 TSPAN12O95859 305 aa10.58□□□□□ -0.72
CCDC40-207ENST00000572253 RING1Q06587 406 aa10.58□□□□□ -0.72
CCDC40-207ENST00000572253 ACOX1Q15067 660 aa10.58□□□□□ -0.72
CCDC40-207ENST00000572253 FAM174BQ3ZCQ3 159 aa10.58□□□□□ -0.72
CCDC40-207ENST00000572253 PSAPL1Q6NUJ1 521 aa10.58□□□□□ -0.72
CCDC40-207ENST00000572253 GLB1LQ6UWU2 654 aa10.58□□□□□ -0.72
CCDC40-207ENST00000572253 ULK4Q96C45 1275 aa10.58□□□□□ -0.72
CCDC40-207ENST00000572253 CSF3RQ99062 836 aa10.58□□□□□ -0.72
CCDC40-207ENST00000572253 MAGIXQ9H6Y5 334 aa10.58□□□□□ -0.72
CCDC40-207ENST00000572253 TMEM165Q9HC07 324 aa10.58□□□□□ -0.72
CCDC40-207ENST00000572253 FLRT1Q9NZU1 646 aa10.58□□□□□ -0.72
CCDC40-207ENST00000572253 MTRRQ9UBK8 725 aa10.58□□□□□ -0.72
CCDC40-207ENST00000572253 FAM92AA1XBS5 289 aa10.58□□□□□ -0.72
CCDC40-207ENST00000572253 OR1I1O60431 355 aa10.58□□□□□ -0.72
CCDC40-207ENST00000572253 CNOT3O75175 753 aaKnown RBP10.58□□□□□ -0.72
CCDC40-207ENST00000572253 AKR1A1P14550 325 aa10.58□□□□□ -0.72
CCDC40-207ENST00000572253 HTR1BP28222 390 aa10.58□□□□□ -0.72
CCDC40-207ENST00000572253 MAGEA11P43364 429 aa10.58□□□□□ -0.72
CCDC40-207ENST00000572253 PIGFQ07326 219 aa10.58□□□□□ -0.72
CCDC40-207ENST00000572253 TAF10Q12962 218 aa10.58□□□□□ -0.72
CCDC40-207ENST00000572253 LAPTM5Q13571 262 aa10.58□□□□□ -0.72
CCDC40-207ENST00000572253 PERM1Q5SV97 790 aa10.58□□□□□ -0.72
CCDC40-207ENST00000572253 PTRHD1Q6GMV3 140 aaKnown RBP10.58□□□□□ -0.72
CCDC40-207ENST00000572253 PIANPQ8IYJ0 282 aa10.58□□□□□ -0.72
CCDC40-207ENST00000572253 DNAJB8Q8NHS0 232 aa10.58□□□□□ -0.72
CCDC40-207ENST00000572253 NEURL2Q9BR09 285 aa10.58□□□□□ -0.72
CCDC40-207ENST00000572253 AMBRA1Q9C0C7 1298 aa10.58□□□□□ -0.72
CCDC40-207ENST00000572253 NACA2Q9H009 215 aa10.58□□□□□ -0.72
CCDC40-207ENST00000572253 PDFQ9HBH1 243 aa10.58□□□□□ -0.72
CCDC40-207ENST00000572253 AGO1Q9UL18 857 aaKnown RBP10.58□□□□□ -0.72
CCDC40-207ENST00000572253 PKP3Q9Y446 797 aa10.58□□□□□ -0.72
CCDC40-207ENST00000572253 CPQQ9Y646 472 aa10.58□□□□□ -0.72
CCDC40-207ENST00000572253 MGEA5O60502 916 aa10.57□□□□□ -0.72
CCDC40-207ENST00000572253 COQ9O75208 318 aa10.57□□□□□ -0.72
CCDC40-207ENST00000572253 UGT2B11O75310 529 aa10.57□□□□□ -0.72
CCDC40-207ENST00000572253 ANGPTL1O95841 491 aa10.57□□□□□ -0.72
CCDC40-207ENST00000572253 RETP07949 1114 aa10.57□□□□□ -0.72
CCDC40-207ENST00000572253 CDKN1CP49918 316 aaPredicted RBP10.57□□□□□ -0.72
CCDC40-207ENST00000572253 IL1RL1Q01638 556 aa10.57□□□□□ -0.72
CCDC40-207ENST00000572253 CCL14Q16627 93 aa10.57□□□□□ -0.72
CCDC40-207ENST00000572253 SMU1Q2TAY7 513 aa10.57□□□□□ -0.72
CCDC40-207ENST00000572253 CTSL3PQ5NE16 218 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms