RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 GP1BBP13224 206 aa13.52□□□□□ -0.25
RPAIN-209ENST00000571558 ACRV1P26436 265 aa13.52□□□□□ -0.25
RPAIN-209ENST00000571558 TEAD1P28347 426 aa13.52□□□□□ -0.25
RPAIN-209ENST00000571558 SLC5A2P31639 672 aa13.52□□□□□ -0.25
RPAIN-209ENST00000571558 GP5P40197 560 aa13.52□□□□□ -0.25
RPAIN-209ENST00000571558 MSH2P43246 934 aa13.52□□□□□ -0.25
RPAIN-209ENST00000571558 TTPAP49638 278 aa13.52□□□□□ -0.25
RPAIN-209ENST00000571558 CSE1LP55060 971 aaKnown RBP13.52□□□□□ -0.25
RPAIN-209ENST00000571558 MPP1Q00013 466 aa13.52□□□□□ -0.25
RPAIN-209ENST00000571558 PTK2BQ14289 1009 aa13.52□□□□□ -0.25
RPAIN-209ENST00000571558 LRRC14Q15048 493 aa13.52□□□□□ -0.25
RPAIN-209ENST00000571558 DBN1Q16643 649 aa13.52□□□□□ -0.25
RPAIN-209ENST00000571558 CERS6Q6ZMG9 384 aa13.52□□□□□ -0.25
RPAIN-209ENST00000571558 RAB11FIP2Q7L804 512 aa13.52□□□□□ -0.25
RPAIN-209ENST00000571558 SDCCAG8Q86SQ7 713 aaPredicted RBP13.52□□□□□ -0.25
RPAIN-209ENST00000571558 ZC3HC1Q86WB0 502 aaKnown RBP13.52□□□□□ -0.25
RPAIN-209ENST00000571558 SERPINA9Q86WD7 417 aa13.52□□□□□ -0.25
RPAIN-209ENST00000571558 FBXO39Q8N4B4 442 aa13.52□□□□□ -0.25
RPAIN-209ENST00000571558 LPGAT1Q92604 370 aa13.52□□□□□ -0.25
RPAIN-209ENST00000571558 EXTL1Q92935 676 aa13.52□□□□□ -0.25
RPAIN-209ENST00000571558 MRRFQ96E11 262 aaKnown RBP13.52□□□□□ -0.25
RPAIN-209ENST00000571558 FBXO6Q9NRD1 293 aaPredicted RBP13.52□□□□□ -0.25
RPAIN-209ENST00000571558 INTS10Q9NVR2 710 aaKnown RBP13.52□□□□□ -0.25
RPAIN-209ENST00000571558 CTNNAL1Q9UBT7 734 aa13.52□□□□□ -0.25
RPAIN-209ENST00000571558 COL27A1Q8IZC6 1860 aaPredicted RBP13.52□□□□□ -0.25
RPAIN-209ENST00000571558 DOCK9Q9BZ29 2069 aa13.51□□□□□ -0.25
RPAIN-209ENST00000571558 TOR1BO14657 336 aa13.51□□□□□ -0.25
RPAIN-209ENST00000571558 CDH16O75309 829 aa13.51□□□□□ -0.25
RPAIN-209ENST00000571558 HAUS5O94927 633 aa13.51□□□□□ -0.25
RPAIN-209ENST00000571558 SLCO1A2P46721 670 aa13.51□□□□□ -0.25
RPAIN-209ENST00000571558 PDX1P52945 283 aa13.51□□□□□ -0.25
RPAIN-209ENST00000571558 SGCGQ13326 291 aa13.51□□□□□ -0.25
RPAIN-209ENST00000571558 PDE1CQ14123 709 aaPredicted RBP13.51□□□□□ -0.25
RPAIN-209ENST00000571558 UBAP2LQ14157 1087 aaKnown RBP13.51□□□□□ -0.25
RPAIN-209ENST00000571558 IRF4Q15306 451 aa13.51□□□□□ -0.25
RPAIN-209ENST00000571558 DEFB133Q30KQ1 61 aa13.51□□□□□ -0.25
RPAIN-209ENST00000571558 AARS2Q5JTZ9 985 aaKnown RBP13.51□□□□□ -0.25
RPAIN-209ENST00000571558 PERM1Q5SV97 790 aa13.51□□□□□ -0.25
RPAIN-209ENST00000571558 CEP85LQ5SZL2 805 aa13.51□□□□□ -0.25
RPAIN-209ENST00000571558 GPRC6AQ5T6X5 926 aa13.51□□□□□ -0.25
RPAIN-209ENST00000571558 GRTP1Q5TC63 336 aa13.51□□□□□ -0.25
RPAIN-209ENST00000571558 LYPLAL1Q5VWZ2 237 aa13.51□□□□□ -0.25
RPAIN-209ENST00000571558 PNCKQ6P2M8 343 aa13.51□□□□□ -0.25
RPAIN-209ENST00000571558 CNSTQ6PJW8 725 aa13.51□□□□□ -0.25
RPAIN-209ENST00000571558 ADAMTSL4Q6UY14 1074 aa13.51□□□□□ -0.25
RPAIN-209ENST00000571558 TAS2R42Q7RTR8 314 aa13.51□□□□□ -0.25
RPAIN-209ENST00000571558 RIBC1Q8N443 379 aaPredicted RBP13.51□□□□□ -0.25
RPAIN-209ENST00000571558 DENND6BQ8NEG7 585 aa13.51□□□□□ -0.25
RPAIN-209ENST00000571558 DDHD1Q8NEL9 900 aa13.51□□□□□ -0.25
RPAIN-209ENST00000571558 GABPB2Q8TAK5 448 aaPredicted RBP13.51□□□□□ -0.25
RPAIN-209ENST00000571558 LMX1AQ8TE12 382 aa13.51□□□□□ -0.25
RPAIN-209ENST00000571558 MZB1Q8WU39 189 aa13.51□□□□□ -0.25
RPAIN-209ENST00000571558 GLYATL1Q969I3 302 aa13.51□□□□□ -0.25
RPAIN-209ENST00000571558 TMEM159Q96B96 161 aa13.51□□□□□ -0.25
RPAIN-209ENST00000571558 ULK4Q96C45 1275 aa13.51□□□□□ -0.25
RPAIN-209ENST00000571558 RBBP8Q99708 897 aa13.51□□□□□ -0.25
RPAIN-209ENST00000571558 SH3GL2Q99962 352 aa13.51□□□□□ -0.25
RPAIN-209ENST00000571558 CCDC3Q9BQI4 270 aa13.51□□□□□ -0.25
RPAIN-209ENST00000571558 SLC25A18Q9H1K4 315 aa13.51□□□□□ -0.25
RPAIN-209ENST00000571558 P2RY12Q9H244 342 aa13.51□□□□□ -0.25
RPAIN-209ENST00000571558 RHOJQ9H4E5 214 aa13.51□□□□□ -0.25
RPAIN-209ENST00000571558 GEMIN8Q9NWZ8 242 aaKnown RBP13.51□□□□□ -0.25
RPAIN-209ENST00000571558 PSMC3IPQ9P2W1 217 aaPredicted RBP13.51□□□□□ -0.25
RPAIN-209ENST00000571558 KLF15Q9UIH9 416 aa13.51□□□□□ -0.25
RPAIN-209ENST00000571558 PADI4Q9UM07 663 aa13.51□□□□□ -0.25
RPAIN-209ENST00000571558 TRPM6Q9BX84 2022 aa13.5□□□□□ -0.25
RPAIN-209ENST00000571558 TDRD6O60522 2096 aaKnown RBP13.5□□□□□ -0.25
RPAIN-209ENST00000571558 SMIM23A6NLE4 172 aa13.5□□□□□ -0.25
RPAIN-209ENST00000571558 OR1I1O60431 355 aa13.5□□□□□ -0.25
RPAIN-209ENST00000571558 ANXA6P08133 673 aa13.5□□□□□ -0.25
RPAIN-209ENST00000571558 INHBAP08476 426 aa13.5□□□□□ -0.25
RPAIN-209ENST00000571558 CCKBRP32239 447 aa13.5□□□□□ -0.25
RPAIN-209ENST00000571558 IGFALSP35858 605 aa13.5□□□□□ -0.25
RPAIN-209ENST00000571558 TRIM23P36406 574 aa13.5□□□□□ -0.25
RPAIN-209ENST00000571558 CD151P48509 253 aa13.5□□□□□ -0.25
RPAIN-209ENST00000571558 SERPINB9P50453 376 aa13.5□□□□□ -0.25
RPAIN-209ENST00000571558 LIMK2P53671 638 aa13.5□□□□□ -0.25
RPAIN-209ENST00000571558 ADARP55265 1226 aaKnown RBP13.5□□□□□ -0.25
RPAIN-209ENST00000571558 PFN3P60673 137 aa13.5□□□□□ -0.25
RPAIN-209ENST00000571558 B4GALNT1Q00973 533 aa13.5□□□□□ -0.25
RPAIN-209ENST00000571558 ITIH4Q14624 930 aa13.5□□□□□ -0.25
RPAIN-209ENST00000571558 KRT71Q3SY84 523 aa13.5□□□□□ -0.25
RPAIN-209ENST00000571558 KHDC1Q4VXA5 237 aaKnown RBP13.5□□□□□ -0.25
RPAIN-209ENST00000571558 TNFAIP8L3Q5GJ75 292 aa13.5□□□□□ -0.25
RPAIN-209ENST00000571558 RNF187Q5TA31 235 aaPredicted RBP13.5□□□□□ -0.25
RPAIN-209ENST00000571558 ZNF549Q6P9A3 640 aa13.5□□□□□ -0.25
RPAIN-209ENST00000571558 LVRNQ6Q4G3 990 aa13.5□□□□□ -0.25
RPAIN-209ENST00000571558 SLC35F3Q8IY50 421 aa13.5□□□□□ -0.25
RPAIN-209ENST00000571558 CYP4X1Q8N118 509 aa13.5□□□□□ -0.25
RPAIN-209ENST00000571558 SDR16C5Q8N3Y7 309 aa13.5□□□□□ -0.25
RPAIN-209ENST00000571558 OTUD6BQ8N6M0 293 aa13.5□□□□□ -0.25
RPAIN-209ENST00000571558 ACVR1CQ8NER5 493 aa13.5□□□□□ -0.25
RPAIN-209ENST00000571558 OR6C4Q8NGE1 309 aa13.5□□□□□ -0.25
RPAIN-209ENST00000571558 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.5□□□□□ -0.254e-10■■■■■ 86.3
RPAIN-209ENST00000571558 ZBTB9Q96C00 473 aa13.5□□□□□ -0.25
RPAIN-209ENST00000571558 COX14Q96I36 57 aa13.5□□□□□ -0.25
RPAIN-209ENST00000571558 TMEM74Q96NL1 305 aa13.5□□□□□ -0.25
RPAIN-209ENST00000571558 BIRC8Q96P09 236 aa13.5□□□□□ -0.25
RPAIN-209ENST00000571558 C1QTNF7Q9BXJ2 289 aa13.5□□□□□ -0.25
RPAIN-209ENST00000571558 ADNPQ9H2P0 1102 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms