RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 GPRIN3Q6ZVF9 776 aa15.17■□□□□ 0.02
SMG6-207ENST00000570756 MOB2Q70IA6 237 aa15.17■□□□□ 0.02
SMG6-207ENST00000570756 MICU2Q8IYU8 434 aa15.17■□□□□ 0.02
SMG6-207ENST00000570756 AMER2Q8N7J2 671 aa15.17■□□□□ 0.02
SMG6-207ENST00000570756 GPR150Q8NGU9 434 aa15.17■□□□□ 0.02
SMG6-207ENST00000570756 SNX18Q96RF0 628 aa15.17■□□□□ 0.02
SMG6-207ENST00000570756 ACOX2Q99424 681 aa15.17■□□□□ 0.02
SMG6-207ENST00000570756 CEP44Q9C0F1 390 aa15.17■□□□□ 0.02
SMG6-207ENST00000570756 C6orf62Q9GZU0 229 aaPredicted RBP15.17■□□□□ 0.02
SMG6-207ENST00000570756 OPTCQ9UBM4 332 aa15.17■□□□□ 0.02
SMG6-207ENST00000570756 CDH9Q9ULB4 789 aa15.17■□□□□ 0.02
SMG6-207ENST00000570756 PCDHB14Q9Y5E9 798 aa15.17■□□□□ 0.02
SMG6-207ENST00000570756 MCM3APO60318 1980 aa15.17■□□□□ 0.02
SMG6-207ENST00000570756 PABPN1LA6NDY0 278 aaKnown RBP15.17■□□□□ 0.02
SMG6-207ENST00000570756 METTL15A6NJ78 407 aa15.17■□□□□ 0.02
SMG6-207ENST00000570756 NOTOA8MTQ0 251 aa15.17■□□□□ 0.02
SMG6-207ENST00000570756 CXCR6O00574 342 aa15.17■□□□□ 0.02
SMG6-207ENST00000570756 RETP07949 1114 aa15.17■□□□□ 0.02
SMG6-207ENST00000570756 PRDX3P30048 256 aaKnown RBP15.17■□□□□ 0.02
SMG6-207ENST00000570756 CD86P42081 329 aa15.17■□□□□ 0.02
SMG6-207ENST00000570756 RENBPP51606 427 aa15.17■□□□□ 0.02
SMG6-207ENST00000570756 RAD51Q06609 339 aa15.17■□□□□ 0.02
SMG6-207ENST00000570756 ARHGAP1Q07960 439 aa15.17■□□□□ 0.02
SMG6-207ENST00000570756 ITKQ08881 620 aa15.17■□□□□ 0.02
SMG6-207ENST00000570756 TTC23LQ6PF05 361 aa15.17■□□□□ 0.02
SMG6-207ENST00000570756 CCBE1Q6UXH8 406 aaPredicted RBP15.17■□□□□ 0.02
SMG6-207ENST00000570756 TMC5Q6UXY8 1006 aa15.17■□□□□ 0.02
SMG6-207ENST00000570756 USP50Q70EL3 339 aaPredicted RBP15.17■□□□□ 0.02
SMG6-207ENST00000570756 TMEM179BQ7Z7N9 219 aa15.17■□□□□ 0.02
SMG6-207ENST00000570756 OR7G1Q8NGA0 311 aa15.17■□□□□ 0.02
SMG6-207ENST00000570756 OR10A6Q8NH74 314 aa15.17■□□□□ 0.02
SMG6-207ENST00000570756 RPL3LQ92901 407 aaKnown RBP15.17■□□□□ 0.02
SMG6-207ENST00000570756 GAD1Q99259 594 aa15.17■□□□□ 0.02
SMG6-207ENST00000570756 AARSD1Q9BTE6 412 aaKnown RBP15.17■□□□□ 0.02
SMG6-207ENST00000570756 CCDC177Q9NQR7 707 aaPredicted RBP15.17■□□□□ 0.02
SMG6-207ENST00000570756 PDGFCQ9NRA1 345 aa15.17■□□□□ 0.02
SMG6-207ENST00000570756 OSER1Q9NX31 292 aa15.17■□□□□ 0.02
SMG6-207ENST00000570756 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.17■□□□□ 0.02
SMG6-207ENST00000570756 PCTPQ9UKL6 214 aa15.17■□□□□ 0.02
SMG6-207ENST00000570756 FAM20BO75063 409 aa15.16■□□□□ 0.02
SMG6-207ENST00000570756 SLC25A27O95847 323 aa15.16■□□□□ 0.02
SMG6-207ENST00000570756 PRKCDQ05655 676 aa15.16■□□□□ 0.02
SMG6-207ENST00000570756 FPGSQ05932 587 aa15.16■□□□□ 0.02
SMG6-207ENST00000570756 SOX4Q06945 474 aaPredicted RBP15.16■□□□□ 0.02
SMG6-207ENST00000570756 CYP4F3Q08477 520 aa15.16■□□□□ 0.02
SMG6-207ENST00000570756 PPP1R8Q12972 351 aaKnown RBP15.16■□□□□ 0.02
SMG6-207ENST00000570756 MFSD4BQ5TF39 518 aa15.16■□□□□ 0.02
SMG6-207ENST00000570756 AGAP6Q5VW22 663 aa15.16■□□□□ 0.02
SMG6-207ENST00000570756 CYP20A1Q6UW02 462 aa15.16■□□□□ 0.02
SMG6-207ENST00000570756 BHLHA9Q7RTU4 235 aa15.16■□□□□ 0.02
SMG6-207ENST00000570756 CTU1Q7Z7A3 348 aaKnown RBP15.16■□□□□ 0.02
SMG6-207ENST00000570756 APOBEC3FQ8IUX4 373 aaKnown RBP15.16■□□□□ 0.02
SMG6-207ENST00000570756 ZMIZ2Q8NF64 920 aa15.16■□□□□ 0.02
SMG6-207ENST00000570756 IPCEF1Q8WWN9 437 aaPredicted RBP15.16■□□□□ 0.02
SMG6-207ENST00000570756 FCGR1BQ92637 280 aa15.16■□□□□ 0.02
SMG6-207ENST00000570756 PEX13Q92968 403 aa15.16■□□□□ 0.02
SMG6-207ENST00000570756 SLC38A4Q969I6 547 aa15.16■□□□□ 0.02
SMG6-207ENST00000570756 NCLNQ969V3 563 aa15.16■□□□□ 0.02
SMG6-207ENST00000570756 RHBDF1Q96CC6 855 aa15.16■□□□□ 0.02
SMG6-207ENST00000570756 TBATAQ96M53 351 aa15.16■□□□□ 0.02
SMG6-207ENST00000570756 AGAP4Q96P64 663 aa15.16■□□□□ 0.02
SMG6-207ENST00000570756 TRIM62Q9BVG3 475 aa15.16■□□□□ 0.02
SMG6-207ENST00000570756 CRTAC1Q9NQ79 661 aa15.16■□□□□ 0.02
SMG6-207ENST00000570756 IL37Q9NZH6 218 aa15.16■□□□□ 0.02
SMG6-207ENST00000570756 EVLQ9UI08 416 aaPredicted RBP15.16■□□□□ 0.02
SMG6-207ENST00000570756 LCHNA4D1U4 455 aa15.16■□□□□ 0.02
SMG6-207ENST00000570756 EVPLLA8MZ36 301 aa15.16■□□□□ 0.02
SMG6-207ENST00000570756 HAT1O14929 419 aa15.16■□□□□ 0.02
SMG6-207ENST00000570756 SCO2O43819 266 aa15.16■□□□□ 0.02
SMG6-207ENST00000570756 RECQL5O94762 991 aaPredicted RBP15.16■□□□□ 0.02
SMG6-207ENST00000570756 ZNF286BP0CG31 522 aa15.16■□□□□ 0.02
SMG6-207ENST00000570756 SPNP16150 400 aa15.16■□□□□ 0.02
SMG6-207ENST00000570756 TGFBR2P37173 567 aa15.16■□□□□ 0.02
SMG6-207ENST00000570756 BRMS1LQ5PSV4 323 aa15.16■□□□□ 0.02
SMG6-207ENST00000570756 ZNF544Q6NX49 715 aa15.16■□□□□ 0.02
SMG6-207ENST00000570756 SHQ1Q6PI26 577 aaKnown RBP15.16■□□□□ 0.02
SMG6-207ENST00000570756 TP53INP1Q96A56 240 aa15.16■□□□□ 0.02
SMG6-207ENST00000570756 ZBTB18Q99592 522 aa15.16■□□□□ 0.02
SMG6-207ENST00000570756 ITPAQ9BY32 194 aa15.16■□□□□ 0.02
SMG6-207ENST00000570756 RIBC2Q9H4K1 309 aa15.16■□□□□ 0.02
SMG6-207ENST00000570756 ZNF408Q9H9D4 720 aa15.16■□□□□ 0.02
SMG6-207ENST00000570756 NT5MQ9NPB1 228 aa15.16■□□□□ 0.02
SMG6-207ENST00000570756 DCAF13Q9NV06 445 aaKnown RBP15.16■□□□□ 0.02
SMG6-207ENST00000570756 TAS2R13Q9NYV9 303 aa15.16■□□□□ 0.02
SMG6-207ENST00000570756 VAPAQ9P0L0 249 aa15.16■□□□□ 0.02
SMG6-207ENST00000570756 TBC1D14Q9P2M4 693 aa15.16■□□□□ 0.02
SMG6-207ENST00000570756 ZNF225Q9UK10 706 aa15.16■□□□□ 0.02
SMG6-207ENST00000570756 UTS2RQ9UKP6 389 aa15.16■□□□□ 0.02
SMG6-207ENST00000570756 GMPPBQ9Y5P6 360 aa15.16■□□□□ 0.02
SMG6-207ENST00000570756 NYNRINQ9P2P1 1898 aaKnown RBP15.16■□□□□ 0.02
SMG6-207ENST00000570756 OR2A25A4D2G3 310 aa15.15■□□□□ 0.02
SMG6-207ENST00000570756 A6NL46 340 aa15.15■□□□□ 0.02
SMG6-207ENST00000570756 AIREO43918 545 aa15.15■□□□□ 0.02
SMG6-207ENST00000570756 DFNA5O60443 496 aa15.15■□□□□ 0.02
SMG6-207ENST00000570756 RHOBTB1O94844 696 aa15.15■□□□□ 0.02
SMG6-207ENST00000570756 MED26O95402 600 aa15.15■□□□□ 0.02
SMG6-207ENST00000570756 G6PDP11413 515 aa15.15■□□□□ 0.02
SMG6-207ENST00000570756 IL1RNP18510 177 aa15.15■□□□□ 0.02
SMG6-207ENST00000570756 OGNP20774 298 aaKnown RBP15.15■□□□□ 0.02
SMG6-207ENST00000570756 CXCR2P25025 360 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms