RNA–Protein interactions for RNA: ENST00000570510.6

VPS53-207, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 4

Gene VPS53, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-207ENST00000570510 KLF7O75840 302 aaPredicted RBP10.76□□□□□ -0.69
VPS53-207ENST00000570510 TPM1P09493 284 aa10.76□□□□□ -0.69
VPS53-207ENST00000570510 HOXB4P17483 251 aaPredicted RBP10.76□□□□□ -0.69
VPS53-207ENST00000570510 POLR2CP19387 275 aaPredicted RBP10.76□□□□□ -0.69
VPS53-207ENST00000570510 HLA-DPA1P20036 260 aa10.76□□□□□ -0.69
VPS53-207ENST00000570510 KPNA2P52292 529 aaKnown RBP10.76□□□□□ -0.69
VPS53-207ENST00000570510 ART1P52961 327 aa10.76□□□□□ -0.69
VPS53-207ENST00000570510 KRTAP10-9P60411 292 aa10.76□□□□□ -0.69
VPS53-207ENST00000570510 DCDP81605 110 aaKnown RBP10.76□□□□□ -0.69
VPS53-207ENST00000570510 DSC2Q02487 901 aa10.76□□□□□ -0.69
VPS53-207ENST00000570510 KLHL30Q0D2K2 578 aa10.76□□□□□ -0.69
VPS53-207ENST00000570510 GSE1Q14687 1217 aa10.76□□□□□ -0.69
VPS53-207ENST00000570510 SMTNL2Q2TAL5 461 aa10.76□□□□□ -0.69
VPS53-207ENST00000570510 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.76□□□□□ -0.69
VPS53-207ENST00000570510 C1orf189Q5VU69 101 aa10.76□□□□□ -0.69
VPS53-207ENST00000570510 PRAMEF13Q5VWM6 474 aa10.76□□□□□ -0.69
VPS53-207ENST00000570510 HOOK3Q86VS8 718 aa10.76□□□□□ -0.69
VPS53-207ENST00000570510 TRAM1L1Q8N609 369 aa10.76□□□□□ -0.69
VPS53-207ENST00000570510 GPR150Q8NGU9 434 aa10.76□□□□□ -0.69
VPS53-207ENST00000570510 OR2Y1Q8NGV0 311 aa10.76□□□□□ -0.69
VPS53-207ENST00000570510 LYSMD1Q96S90 227 aa10.76□□□□□ -0.69
VPS53-207ENST00000570510 C1GALT1Q9NS00 363 aa10.76□□□□□ -0.69
VPS53-207ENST00000570510 PARVAQ9NVD7 372 aa10.76□□□□□ -0.69
VPS53-207ENST00000570510 IRAK4Q9NWZ3 460 aa10.76□□□□□ -0.69
VPS53-207ENST00000570510 DTLQ9NZJ0 730 aa10.76□□□□□ -0.69
VPS53-207ENST00000570510 NEU2Q9Y3R4 380 aa10.76□□□□□ -0.69
VPS53-207ENST00000570510 CFAP20Q9Y6A4 193 aaKnown RBP10.76□□□□□ -0.69
VPS53-207ENST00000570510 TCRBV5S1A1TA0A578 114 aa10.75□□□□□ -0.69
VPS53-207ENST00000570510 FAM155BO75949 473 aa10.75□□□□□ -0.69
VPS53-207ENST00000570510 UNC5CO95185 931 aa10.75□□□□□ -0.69
VPS53-207ENST00000570510 SERPING1P05155 500 aa10.75□□□□□ -0.69
VPS53-207ENST00000570510 UQCRHP07919 91 aa10.75□□□□□ -0.69
VPS53-207ENST00000570510 MIPP30301 263 aa10.75□□□□□ -0.69
VPS53-207ENST00000570510 OGDHQ02218 1023 aa10.75□□□□□ -0.69
VPS53-207ENST00000570510 TMEM115Q12893 351 aaPredicted RBP10.75□□□□□ -0.69
VPS53-207ENST00000570510 GALNT3Q14435 633 aa10.75□□□□□ -0.69
VPS53-207ENST00000570510 SLC9A5Q14940 896 aa10.75□□□□□ -0.69
VPS53-207ENST00000570510 CCDC122Q5T0U0 273 aa10.75□□□□□ -0.69
VPS53-207ENST00000570510 FAAH2Q6GMR7 532 aa10.75□□□□□ -0.69
VPS53-207ENST00000570510 PLEKHA7Q6IQ23 1121 aa10.75□□□□□ -0.69
VPS53-207ENST00000570510 SARM1Q6SZW1 724 aa10.75□□□□□ -0.69
VPS53-207ENST00000570510 LINC00696Q6ZRV3 163 aa10.75□□□□□ -0.69
VPS53-207ENST00000570510 LRRC49Q8IUZ0 686 aa10.75□□□□□ -0.69
VPS53-207ENST00000570510 ZNF547Q8IVP9 402 aa10.75□□□□□ -0.69
VPS53-207ENST00000570510 MCOLN2Q8IZK6 566 aa10.75□□□□□ -0.69
VPS53-207ENST00000570510 BEND7Q8N7W2 519 aaPredicted RBP10.75□□□□□ -0.69
VPS53-207ENST00000570510 GPR26Q8NDV2 337 aa10.75□□□□□ -0.69
VPS53-207ENST00000570510 OR4E2Q8NGC2 313 aa10.75□□□□□ -0.69
VPS53-207ENST00000570510 BRSK1Q8TDC3 778 aa10.75□□□□□ -0.69
VPS53-207ENST00000570510 HSPH1Q92598 858 aa10.75□□□□□ -0.69
VPS53-207ENST00000570510 MTFMTQ96DP5 389 aaKnown RBP10.75□□□□□ -0.69
VPS53-207ENST00000570510 C14orf79Q96F83 325 aa10.75□□□□□ -0.69
VPS53-207ENST00000570510 VPS50Q96JG6 964 aa10.75□□□□□ -0.69
VPS53-207ENST00000570510 PEBP4Q96S96 227 aa10.75□□□□□ -0.69
VPS53-207ENST00000570510 NUP85Q9BW27 656 aa10.75□□□□□ -0.69
VPS53-207ENST00000570510 AP1M1Q9BXS5 423 aa10.75□□□□□ -0.69
VPS53-207ENST00000570510 GPR63Q9BZJ6 419 aa10.75□□□□□ -0.69
VPS53-207ENST00000570510 ZCCHC2Q9C0B9 1178 aaKnown RBP10.75□□□□□ -0.69
VPS53-207ENST00000570510 ISCUQ9H1K1 167 aa10.75□□□□□ -0.69
VPS53-207ENST00000570510 MCCC2Q9HCC0 563 aa10.75□□□□□ -0.69
VPS53-207ENST00000570510 MRPL47Q9HD33 250 aaKnown RBP10.75□□□□□ -0.69
VPS53-207ENST00000570510 TXLNGQ9NUQ3 528 aa10.75□□□□□ -0.69
VPS53-207ENST00000570510 RBM22Q9NW64 420 aaKnown RBP eCLIP10.75□□□□□ -0.69
VPS53-207ENST00000570510 CDC23Q9UJX2 597 aa10.75□□□□□ -0.69
VPS53-207ENST00000570510 SHOC2Q9UQ13 582 aa10.75□□□□□ -0.69
VPS53-207ENST00000570510 AP1M2Q9Y6Q5 423 aa10.75□□□□□ -0.69
VPS53-207ENST00000570510 SCINQ9Y6U3 715 aa10.75□□□□□ -0.69
VPS53-207ENST00000570510 COLEC10Q9Y6Z7 277 aa10.75□□□□□ -0.69
VPS53-207ENST00000570510 NIPBLQ6KC79 2804 aaeCLIP10.75□□□□□ -0.69
VPS53-207ENST00000570510 MYO7BQ6PIF6 2116 aa10.75□□□□□ -0.69
VPS53-207ENST00000570510 ZGRF1Q86YA3 2104 aa10.75□□□□□ -0.69
VPS53-207ENST00000570510 SPG11Q96JI7 2443 aa10.74□□□□□ -0.69
VPS53-207ENST00000570510 FER1L5A0AVI2 2057 aa10.74□□□□□ -0.69
VPS53-207ENST00000570510 DYTNA2CJ06 578 aa10.74□□□□□ -0.69
VPS53-207ENST00000570510 MATN2O00339 956 aa10.74□□□□□ -0.69
VPS53-207ENST00000570510 PCDH17O14917 1159 aa10.74□□□□□ -0.69
VPS53-207ENST00000570510 POP7O75817 140 aaKnown RBP10.74□□□□□ -0.69
VPS53-207ENST00000570510 MTHFD1P11586 935 aaKnown RBP10.74□□□□□ -0.69
VPS53-207ENST00000570510 PBLDP30039 288 aaPredicted RBP10.74□□□□□ -0.69
VPS53-207ENST00000570510 LMAN1P49257 510 aa10.74□□□□□ -0.69
VPS53-207ENST00000570510 PPP2R2AP63151 447 aa10.74□□□□□ -0.69
VPS53-207ENST00000570510 ARG2P78540 354 aa10.74□□□□□ -0.69
VPS53-207ENST00000570510 QPCTQ16769 361 aa10.74□□□□□ -0.69
VPS53-207ENST00000570510 TIGD7Q6NT04 549 aaPredicted RBP10.74□□□□□ -0.69
VPS53-207ENST00000570510 RPUSD3Q6P087 351 aaKnown RBP10.74□□□□□ -0.69
VPS53-207ENST00000570510 TEX26Q8N6G2 289 aa10.74□□□□□ -0.69
VPS53-207ENST00000570510 ZFPM2Q8WW38 1151 aa10.74□□□□□ -0.69
VPS53-207ENST00000570510 NR4A3Q92570 626 aa10.74□□□□□ -0.69
VPS53-207ENST00000570510 C12orf66Q96MD2 445 aa10.74□□□□□ -0.69
VPS53-207ENST00000570510 PPM1MQ96MI6 270 aa10.74□□□□□ -0.69
VPS53-207ENST00000570510 LHPPQ9H008 270 aa10.74□□□□□ -0.69
VPS53-207ENST00000570510 HAUS4Q9H6D7 363 aa10.74□□□□□ -0.69
VPS53-207ENST00000570510 ETNK2Q9NVF9 386 aa10.74□□□□□ -0.69
VPS53-207ENST00000570510 FBXL4Q9UKA2 621 aa10.74□□□□□ -0.69
VPS53-207ENST00000570510 DCHS2Q6V1P9 2916 aa10.74□□□□□ -0.69
VPS53-207ENST00000570510 FBN3Q75N90 2809 aa10.73□□□□□ -0.69
VPS53-207ENST00000570510 PCSK5Q92824 1860 aa10.73□□□□□ -0.69
VPS53-207ENST00000570510 CCDC78A2IDD5 438 aa10.73□□□□□ -0.69
VPS53-207ENST00000570510 OR2B3O76000 313 aa10.73□□□□□ -0.69
VPS53-207ENST00000570510 PRLP01236 227 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms