RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 CCNFP41002 786 aa6.46□□□□□ -1.38
CTDNEP1-204ENST00000570484 ACTR1BP42025 376 aa6.46□□□□□ -1.38
CTDNEP1-204ENST00000570484 CCT5P48643 541 aa6.46□□□□□ -1.38
CTDNEP1-204ENST00000570484 CSNK1EP49674 416 aaKnown RBP6.46□□□□□ -1.38
CTDNEP1-204ENST00000570484 CLCN7P51798 805 aa6.46□□□□□ -1.38
CTDNEP1-204ENST00000570484 HK3P52790 923 aa6.46□□□□□ -1.38
CTDNEP1-204ENST00000570484 ATXN3P54252 364 aaPredicted RBP6.46□□□□□ -1.38
CTDNEP1-204ENST00000570484 NXPH1P58417 271 aa6.46□□□□□ -1.38
CTDNEP1-204ENST00000570484 ACTR1AP61163 376 aa6.46□□□□□ -1.38
CTDNEP1-204ENST00000570484 MAGOHP61326 146 aaKnown RBP6.46□□□□□ -1.38
CTDNEP1-204ENST00000570484 ATP6V0D1P61421 351 aa6.46□□□□□ -1.38
CTDNEP1-204ENST00000570484 HNRNPKP61978 463 aaKnown RBP eCLIP6.46□□□□□ -1.38
CTDNEP1-204ENST00000570484 RPA4Q13156 261 aa6.46□□□□□ -1.38
CTDNEP1-204ENST00000570484 BIRC2Q13490 618 aa6.46□□□□□ -1.38
CTDNEP1-204ENST00000570484 CSHL1Q14406 222 aa6.46□□□□□ -1.38
CTDNEP1-204ENST00000570484 ELOCQ15369 112 aa6.46□□□□□ -1.38
CTDNEP1-204ENST00000570484 TCEA2Q15560 299 aa6.46□□□□□ -1.38
CTDNEP1-204ENST00000570484 DUOXA1Q1HG43 343 aa6.46□□□□□ -1.38
CTDNEP1-204ENST00000570484 ALG11Q2TAA5 492 aa6.46□□□□□ -1.38
CTDNEP1-204ENST00000570484 LAIR1Q6GTX8 287 aa6.46□□□□□ -1.38
CTDNEP1-204ENST00000570484 IL27RAQ6UWB1 636 aa6.46□□□□□ -1.38
CTDNEP1-204ENST00000570484 TIFABQ6ZNK6 161 aa6.46□□□□□ -1.38
CTDNEP1-204ENST00000570484 ADAMTSL2Q86TH1 951 aa6.46□□□□□ -1.38
CTDNEP1-204ENST00000570484 LCA5Q86VQ0 697 aa6.46□□□□□ -1.38
CTDNEP1-204ENST00000570484 CEP97Q8IW35 865 aa6.46□□□□□ -1.38
CTDNEP1-204ENST00000570484 CPNE9Q8IYJ1 553 aa6.46□□□□□ -1.38
CTDNEP1-204ENST00000570484 SLC22A18ASQ8N1D0 253 aa6.46□□□□□ -1.38
CTDNEP1-204ENST00000570484 FSTL5Q8N475 847 aaPredicted RBP6.46□□□□□ -1.38
CTDNEP1-204ENST00000570484 ARFGAP2Q8N6H7 521 aa6.46□□□□□ -1.38
CTDNEP1-204ENST00000570484 OR2L2Q8NH16 312 aa6.46□□□□□ -1.38
CTDNEP1-204ENST00000570484 LKAAEAR1Q8TD35 194 aa6.46□□□□□ -1.38
CTDNEP1-204ENST00000570484 NELL1Q92832 810 aa6.46□□□□□ -1.38
CTDNEP1-204ENST00000570484 INPP5DQ92835 1189 aa6.46□□□□□ -1.38
CTDNEP1-204ENST00000570484 TSACCQ96A04 125 aaPredicted RBP6.46□□□□□ -1.38
CTDNEP1-204ENST00000570484 ISL2Q96A47 359 aa6.46□□□□□ -1.38
CTDNEP1-204ENST00000570484 LOXL4Q96JB6 756 aa6.46□□□□□ -1.38
CTDNEP1-204ENST00000570484 ZC3H10Q96K80 434 aaKnown RBP6.46□□□□□ -1.38
CTDNEP1-204ENST00000570484 LINC00615Q96LM1 132 aaPredicted RBP6.46□□□□□ -1.38
CTDNEP1-204ENST00000570484 SH3GL2Q99962 352 aa6.46□□□□□ -1.38
CTDNEP1-204ENST00000570484 MCMBPQ9BTE3 642 aa6.46□□□□□ -1.38
CTDNEP1-204ENST00000570484 NUSAP1Q9BXS6 441 aaKnown RBP6.46□□□□□ -1.38
CTDNEP1-204ENST00000570484 ZNF106Q9H2Y7 1883 aaKnown RBP6.46□□□□□ -1.38
CTDNEP1-204ENST00000570484 STN1Q9H668 368 aaKnown RBP6.46□□□□□ -1.38
CTDNEP1-204ENST00000570484 ZNF395Q9H8N7 513 aaPredicted RBP6.46□□□□□ -1.38
CTDNEP1-204ENST00000570484 COG4Q9H9E3 785 aa6.46□□□□□ -1.38
CTDNEP1-204ENST00000570484 NMRAL1Q9HBL8 299 aa6.46□□□□□ -1.38
CTDNEP1-204ENST00000570484 KCNK9Q9NPC2 374 aa6.46□□□□□ -1.38
CTDNEP1-204ENST00000570484 MRPL40Q9NQ50 206 aaKnown RBP6.46□□□□□ -1.38
CTDNEP1-204ENST00000570484 KLC4Q9NSK0 619 aa6.46□□□□□ -1.38
CTDNEP1-204ENST00000570484 EURLQ9NYK6 297 aa6.46□□□□□ -1.38
CTDNEP1-204ENST00000570484 SCHIP1Q9P0W5 487 aaPredicted RBP6.46□□□□□ -1.38
CTDNEP1-204ENST00000570484 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.46□□□□□ -1.38
CTDNEP1-204ENST00000570484 KLHL42Q9P2K6 505 aa6.46□□□□□ -1.38
CTDNEP1-204ENST00000570484 SPASTQ9UBP0 616 aa6.46□□□□□ -1.38
CTDNEP1-204ENST00000570484 KCNK6Q9Y257 313 aa6.46□□□□□ -1.38
CTDNEP1-204ENST00000570484 DHRS7Q9Y394 339 aa6.46□□□□□ -1.38
CTDNEP1-204ENST00000570484 PCDHGA5Q9Y5G8 931 aa6.46□□□□□ -1.38
CTDNEP1-204ENST00000570484 DNMT3AQ9Y6K1 912 aaPredicted RBP6.46□□□□□ -1.38
CTDNEP1-204ENST00000570484 DGKBQ9Y6T7 804 aa6.46□□□□□ -1.38
CTDNEP1-204ENST00000570484 R4GN57 208 aa6.46□□□□□ -1.38
CTDNEP1-204ENST00000570484 F5P12259 2224 aa6.46□□□□□ -1.38
CTDNEP1-204ENST00000570484 ANKRD36A6QL64 1941 aa6.46□□□□□ -1.38
CTDNEP1-204ENST00000570484 C17orf113A0A1B0GUU1 675 aa6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 A0A1B0GVT2 93 aa6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 A0A1W2PPM1 405 aa6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 A0A1W2PR77 199 aa6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 NPEPPSL1A6NEC2 478 aa6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 SYCE1LA8MT33 242 aa6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 C10orf142B7Z368 130 aa6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 AGPSO00116 658 aa6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 TM9SF1O15321 606 aa6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 SNX2O60749 519 aa6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 LILRB5O75023 590 aa6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 SPAG7O75391 227 aa6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 RFPL1O75677 317 aa6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 EPN2O95208 641 aa6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 ZWINTO95229 277 aa6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 CATP04040 527 aaKnown RBP6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 C2P06681 752 aa6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 C8GP07360 202 aa6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 SYPP08247 313 aa6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 GSTA1P08263 222 aa6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 NEFHP12036 1026 aa6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 COL6A2P12110 1019 aa6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 NME1P15531 152 aaKnown RBP6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 TFEBP19484 476 aa6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 TAC1P20366 129 aa6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 NR1D1P20393 614 aa6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 CYP2A7P20853 494 aa6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 IDSP22304 550 aa6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 AOAHP28039 575 aa6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 CCR7P32248 378 aa6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 MAGEA12P43365 314 aa6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 PREPP48147 710 aa6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 GLRBP48167 497 aa6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 CCT8P50990 548 aa6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 ARHGAP8P85298 464 aa6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 IRF9Q00978 393 aa6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 DMPKQ09013 629 aa6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 GRIK2Q13002 908 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms