RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 SNX20Q7Z614 316 aa14.19□□□□□ -0.14
COMMD4-225ENST00000569245 C11orf96Q7Z7L8 435 aa14.19□□□□□ -0.14
COMMD4-225ENST00000569245 CLEC14AQ86T13 490 aa14.19□□□□□ -0.14
COMMD4-225ENST00000569245 ANKMY2Q8IV38 441 aa14.19□□□□□ -0.14
COMMD4-225ENST00000569245 IGDCC3Q8IVU1 814 aa14.19□□□□□ -0.14
COMMD4-225ENST00000569245 MPP5Q8N3R9 675 aa14.19□□□□□ -0.14
COMMD4-225ENST00000569245 BEND7Q8N7W2 519 aaPredicted RBP14.19□□□□□ -0.14
COMMD4-225ENST00000569245 AGBL5Q8NDL9 886 aa14.19□□□□□ -0.14
COMMD4-225ENST00000569245 NAT14Q8WUY8 206 aa14.19□□□□□ -0.14
COMMD4-225ENST00000569245 USP7Q93009 1102 aa14.19□□□□□ -0.14
COMMD4-225ENST00000569245 STAMBPL1Q96FJ0 436 aa14.19□□□□□ -0.14
COMMD4-225ENST00000569245 COPS8Q99627 209 aa14.19□□□□□ -0.14
COMMD4-225ENST00000569245 DPH1Q9BZG8 443 aa14.19□□□□□ -0.14
COMMD4-225ENST00000569245 EPB41L4BQ9H329 900 aa14.19□□□□□ -0.14
COMMD4-225ENST00000569245 MRM3Q9HC36 420 aaKnown RBP14.19□□□□□ -0.14
COMMD4-225ENST00000569245 WASH6PQ9NQA3 447 aa14.19□□□□□ -0.14
COMMD4-225ENST00000569245 ZNF624Q9P2J8 865 aaPredicted RBP14.19□□□□□ -0.14
COMMD4-225ENST00000569245 FAM8A1Q9UBU6 413 aa14.19□□□□□ -0.14
COMMD4-225ENST00000569245 SOX13Q9UN79 622 aa14.19□□□□□ -0.14
COMMD4-225ENST00000569245 CHMP2BQ9UQN3 213 aa14.19□□□□□ -0.14
COMMD4-225ENST00000569245 PCDHGA7Q9Y5G6 932 aa14.19□□□□□ -0.14
COMMD4-225ENST00000569245 DNMT3AQ9Y6K1 912 aaPredicted RBP14.19□□□□□ -0.14
COMMD4-225ENST00000569245 FAM237BA0A1B0GVD1 139 aa14.18□□□□□ -0.14
COMMD4-225ENST00000569245 RIPK2O43353 540 aa14.18□□□□□ -0.14
COMMD4-225ENST00000569245 SPAG6O75602 509 aa14.18□□□□□ -0.14
COMMD4-225ENST00000569245 ABHD2P08910 425 aa14.18□□□□□ -0.14
COMMD4-225ENST00000569245 GSTA2P09210 222 aa14.18□□□□□ -0.14
COMMD4-225ENST00000569245 THRAP10827 490 aa14.18□□□□□ -0.14
COMMD4-225ENST00000569245 CCL4P13236 92 aa14.18□□□□□ -0.14
COMMD4-225ENST00000569245 BRAFP15056 766 aa14.18□□□□□ -0.14
COMMD4-225ENST00000569245 TYRP1P17643 537 aa14.18□□□□□ -0.14
COMMD4-225ENST00000569245 AMD1P17707 334 aa14.18□□□□□ -0.14
COMMD4-225ENST00000569245 PGAM1P18669 254 aa14.18□□□□□ -0.14
COMMD4-225ENST00000569245 ADRA1DP25100 572 aa14.18□□□□□ -0.14
COMMD4-225ENST00000569245 ETV5P41161 510 aa14.18□□□□□ -0.14
COMMD4-225ENST00000569245 LAMB3Q13751 1172 aa14.18□□□□□ -0.14
COMMD4-225ENST00000569245 NFE2L1Q14494 772 aa14.18□□□□□ -0.14
COMMD4-225ENST00000569245 CASP8Q14790 479 aa14.18□□□□□ -0.14
COMMD4-225ENST00000569245 KYNUQ16719 465 aa14.18□□□□□ -0.14
COMMD4-225ENST00000569245 SKIDA1Q1XH10 827 aa14.18□□□□□ -0.14
COMMD4-225ENST00000569245 GPR33Q49SQ1 333 aa14.18□□□□□ -0.14
COMMD4-225ENST00000569245 HP1BP3Q5SSJ5 553 aaPredicted RBP14.18□□□□□ -0.14
COMMD4-225ENST00000569245 STEAP4Q687X5 459 aa14.18□□□□□ -0.14
COMMD4-225ENST00000569245 FAM83HQ6ZRV2 1179 aaPredicted RBP14.18□□□□□ -0.14
COMMD4-225ENST00000569245 TMEM26Q6ZUK4 368 aa14.18□□□□□ -0.14
COMMD4-225ENST00000569245 FAM129CQ86XR2 697 aa14.18□□□□□ -0.14
COMMD4-225ENST00000569245 PALM2Q8IXS6 379 aa14.18□□□□□ -0.14
COMMD4-225ENST00000569245 NXPE1Q8N323 547 aa14.18□□□□□ -0.14
COMMD4-225ENST00000569245 STYXQ8WUJ0 223 aa14.18□□□□□ -0.14
COMMD4-225ENST00000569245 HEXDCQ8WVB3 486 aa14.18□□□□□ -0.14
COMMD4-225ENST00000569245 C19orf43Q9BQ61 176 aa14.18□□□□□ -0.14
COMMD4-225ENST00000569245 KIFC1Q9BW19 673 aa14.18□□□□□ -0.14
COMMD4-225ENST00000569245 FUT8Q9BYC5 575 aa14.18□□□□□ -0.14
COMMD4-225ENST00000569245 EPB41L1Q9H4G0 881 aa14.18□□□□□ -0.14
COMMD4-225ENST00000569245 LRRC4CQ9HCJ2 640 aa14.18□□□□□ -0.14
COMMD4-225ENST00000569245 POT1Q9NUX5 634 aa14.18□□□□□ -0.14
COMMD4-225ENST00000569245 NLE1Q9NVX2 485 aaPredicted RBP14.18□□□□□ -0.14
COMMD4-225ENST00000569245 SAMD15Q9P1V8 674 aa14.18□□□□□ -0.14
COMMD4-225ENST00000569245 ZC3H7BQ9UGR2 993 aaKnown RBP14.18□□□□□ -0.14
COMMD4-225ENST00000569245 KLHL3Q9UH77 587 aa14.18□□□□□ -0.14
COMMD4-225ENST00000569245 PSMD13Q9UNM6 376 aa14.18□□□□□ -0.14
COMMD4-225ENST00000569245 WDR37Q9Y2I8 494 aa14.18□□□□□ -0.14
COMMD4-225ENST00000569245 MAD1L1Q9Y6D9 718 aa14.18□□□□□ -0.14
COMMD4-225ENST00000569245 ZFYVE26Q68DK2 2539 aa14.18□□□□□ -0.14
COMMD4-225ENST00000569245 UNC13CQ8NB66 2214 aa14.17□□□□□ -0.14
COMMD4-225ENST00000569245 PRAMEF33A0A0G2JMD5 474 aa14.17□□□□□ -0.14
COMMD4-225ENST00000569245 HEATR9A2RTY3 570 aa14.17□□□□□ -0.14
COMMD4-225ENST00000569245 MGAT4DA6NG13 374 aa14.17□□□□□ -0.14
COMMD4-225ENST00000569245 LILRA5A6NI73 299 aa14.17□□□□□ -0.14
COMMD4-225ENST00000569245 PRR19A6NJB7 356 aa14.17□□□□□ -0.14
COMMD4-225ENST00000569245 NVLO15381 856 aaKnown RBP14.17□□□□□ -0.14
COMMD4-225ENST00000569245 PRAMEF10O60809 474 aa14.17□□□□□ -0.14
COMMD4-225ENST00000569245 USP1O94782 785 aa14.17□□□□□ -0.14
COMMD4-225ENST00000569245 UBXN7O94888 489 aa14.17□□□□□ -0.14
COMMD4-225ENST00000569245 ATP1B2P14415 290 aaPredicted RBP14.17□□□□□ -0.14
COMMD4-225ENST00000569245 CDKN1CP49918 316 aaPredicted RBP14.17□□□□□ -0.14
COMMD4-225ENST00000569245 GPX6P59796 221 aa14.17□□□□□ -0.14
COMMD4-225ENST00000569245 CXADRP78310 365 aa14.17□□□□□ -0.14
COMMD4-225ENST00000569245 CRADDP78560 199 aa14.17□□□□□ -0.14
COMMD4-225ENST00000569245 DMPKQ09013 629 aa14.17□□□□□ -0.14
COMMD4-225ENST00000569245 CLCA4Q14CN2 919 aa14.17□□□□□ -0.14
COMMD4-225ENST00000569245 NLRP9Q7RTR0 991 aa14.17□□□□□ -0.14
COMMD4-225ENST00000569245 HDXQ7Z353 690 aa14.17□□□□□ -0.14
COMMD4-225ENST00000569245 TMEM135Q86UB9 458 aa14.17□□□□□ -0.14
COMMD4-225ENST00000569245 PLXDC1Q8IUK5 500 aa14.17□□□□□ -0.14
COMMD4-225ENST00000569245 RBM12BQ8IXT5 1001 aaKnown RBP14.17□□□□□ -0.14
COMMD4-225ENST00000569245 PPHLN1Q8NEY8 458 aaKnown RBP14.17□□□□□ -0.14
COMMD4-225ENST00000569245 UBLCP1Q8WVY7 318 aaPredicted RBP14.17□□□□□ -0.14
COMMD4-225ENST00000569245 CDKN2AIPNLQ96HQ2 116 aa14.17□□□□□ -0.14
COMMD4-225ENST00000569245 FCRL3Q96P31 734 aaPredicted RBP14.17□□□□□ -0.14
COMMD4-225ENST00000569245 VIPAS39Q9H9C1 493 aa14.17□□□□□ -0.14
COMMD4-225ENST00000569245 UCK1Q9HA47 277 aa14.17□□□□□ -0.14
COMMD4-225ENST00000569245 SLC40A1Q9NP59 571 aa14.17□□□□□ -0.14
COMMD4-225ENST00000569245 RIMKLBQ9ULI2 386 aa14.17□□□□□ -0.14
COMMD4-225ENST00000569245 TCAF1Q9Y4C2 921 aa14.17□□□□□ -0.14
COMMD4-225ENST00000569245 KLHL33A6NCF5 533 aa14.16□□□□□ -0.14
COMMD4-225ENST00000569245 MROH6A6NGR9 719 aa14.16□□□□□ -0.14
COMMD4-225ENST00000569245 EFCAB7A8K855 629 aa14.16□□□□□ -0.14
COMMD4-225ENST00000569245 ATP8B1O43520 1251 aa14.16□□□□□ -0.14
COMMD4-225ENST00000569245 POLBP06746 335 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms