RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 TICAM1Q8IUC6 712 aa15.31■□□□□ 0.04
HERPUD1-215ENST00000568676 CLEC1AQ8NC01 280 aa15.31■□□□□ 0.04
HERPUD1-215ENST00000568676 BLOC1S5Q8TDH9 187 aa15.31■□□□□ 0.04
HERPUD1-215ENST00000568676 HEXDCQ8WVB3 486 aa15.31■□□□□ 0.04
HERPUD1-215ENST00000568676 CPLX3Q8WVH0 158 aa15.31■□□□□ 0.04
HERPUD1-215ENST00000568676 C5orf34Q96MH7 638 aa15.31■□□□□ 0.04
HERPUD1-215ENST00000568676 FCRL5Q96RD9 977 aa15.31■□□□□ 0.04
HERPUD1-215ENST00000568676 C19orf43Q9BQ61 176 aa15.31■□□□□ 0.04
HERPUD1-215ENST00000568676 MFRPQ9BY79 579 aa15.31■□□□□ 0.04
HERPUD1-215ENST00000568676 C17orf113A0A1B0GUU1 675 aa15.3■□□□□ 0.04
HERPUD1-215ENST00000568676 SLC9B1P1A6NJY1 282 aa15.3■□□□□ 0.04
HERPUD1-215ENST00000568676 TMEM150CB9EJG8 249 aa15.3■□□□□ 0.04
HERPUD1-215ENST00000568676 E7EQ34 232 aa15.3■□□□□ 0.04
HERPUD1-215ENST00000568676 CBX6O95503 412 aa15.3■□□□□ 0.04
HERPUD1-215ENST00000568676 PRAMEF1O95521 474 aa15.3■□□□□ 0.04
HERPUD1-215ENST00000568676 KRT1P04264 644 aa15.3■□□□□ 0.04
HERPUD1-215ENST00000568676 RALBP11234 206 aa15.3■□□□□ 0.04
HERPUD1-215ENST00000568676 POLR2CP19387 275 aaPredicted RBP15.3■□□□□ 0.04
HERPUD1-215ENST00000568676 PBLDP30039 288 aaPredicted RBP15.3■□□□□ 0.04
HERPUD1-215ENST00000568676 CD68P34810 354 aaPredicted RBP15.3■□□□□ 0.04
HERPUD1-215ENST00000568676 DCTP40126 519 aa15.3■□□□□ 0.04
HERPUD1-215ENST00000568676 SLC1A1P43005 524 aa15.3■□□□□ 0.04
HERPUD1-215ENST00000568676 FANCCQ00597 558 aa15.3■□□□□ 0.04
HERPUD1-215ENST00000568676 ELOAQ14241 798 aaKnown RBP15.3■□□□□ 0.04
HERPUD1-215ENST00000568676 SSPNQ14714 243 aa15.3■□□□□ 0.04
HERPUD1-215ENST00000568676 ZNF789Q5FWF6 425 aa15.3■□□□□ 0.04
HERPUD1-215ENST00000568676 DOPEY1Q5JWR5 2465 aa15.3■□□□□ 0.04
HERPUD1-215ENST00000568676 LYPLAL1Q5VWZ2 237 aa15.3■□□□□ 0.04
HERPUD1-215ENST00000568676 LCN10Q6JVE6 187 aa15.3■□□□□ 0.04
HERPUD1-215ENST00000568676 NPNTQ6UXI9 565 aa15.3■□□□□ 0.04
HERPUD1-215ENST00000568676 RHOT2Q8IXI1 618 aa15.3■□□□□ 0.04
HERPUD1-215ENST00000568676 OR4E2Q8NGC2 313 aa15.3■□□□□ 0.04
HERPUD1-215ENST00000568676 OR1L3Q8NH93 324 aa15.3■□□□□ 0.04
HERPUD1-215ENST00000568676 HM13Q8TCT9 377 aa15.3■□□□□ 0.04
HERPUD1-215ENST00000568676 SNRNP40Q96DI7 357 aaKnown RBP15.3■□□□□ 0.04
HERPUD1-215ENST00000568676 MRGPRX2Q96LB1 330 aa15.3■□□□□ 0.04
HERPUD1-215ENST00000568676 FSD1LQ9BXM9 530 aa15.3■□□□□ 0.04
HERPUD1-215ENST00000568676 PITPNM3Q9BZ71 974 aa15.3■□□□□ 0.04
HERPUD1-215ENST00000568676 SRMSQ9H3Y6 488 aa15.3■□□□□ 0.04
HERPUD1-215ENST00000568676 KLHL8Q9P2G9 620 aaPredicted RBP15.3■□□□□ 0.04
HERPUD1-215ENST00000568676 ERRFI1Q9UJM3 462 aaPredicted RBP15.3■□□□□ 0.04
HERPUD1-215ENST00000568676 A6NL46 340 aa15.29■□□□□ 0.04
HERPUD1-215ENST00000568676 C2orf81A6NN90 581 aa15.29■□□□□ 0.04
HERPUD1-215ENST00000568676 GAPDHSO14556 408 aaPredicted RBP15.29■□□□□ 0.04
HERPUD1-215ENST00000568676 GYPCP04921 128 aa15.29■□□□□ 0.04
HERPUD1-215ENST00000568676 NFKB1P19838 968 aa15.29■□□□□ 0.04
HERPUD1-215ENST00000568676 PRDX3P30048 256 aaKnown RBP15.29■□□□□ 0.04
HERPUD1-215ENST00000568676 WASHC5Q12768 1159 aa15.29■□□□□ 0.04
HERPUD1-215ENST00000568676 ATP1A4Q13733 1029 aa15.29■□□□□ 0.04
HERPUD1-215ENST00000568676 MYBPC3Q14896 1274 aa15.29■□□□□ 0.04
HERPUD1-215ENST00000568676 NR6A1Q15406 480 aa15.29■□□□□ 0.04
HERPUD1-215ENST00000568676 DUS1LQ6P1R4 473 aaKnown RBP15.29■□□□□ 0.04
HERPUD1-215ENST00000568676 GPR135Q8IZ08 494 aa15.29■□□□□ 0.04
HERPUD1-215ENST00000568676 SLC34A3Q8N130 599 aa15.29■□□□□ 0.04
HERPUD1-215ENST00000568676 SLC25A41Q8N5S1 370 aa15.29■□□□□ 0.04
HERPUD1-215ENST00000568676 TTC13Q8NBP0 860 aa15.29■□□□□ 0.04
HERPUD1-215ENST00000568676 SPDYE1Q8NFV5 336 aaPredicted RBP15.29■□□□□ 0.04
HERPUD1-215ENST00000568676 SLC35G2Q8TBE7 412 aa15.29■□□□□ 0.04
HERPUD1-215ENST00000568676 LCN9Q8WX39 176 aa15.29■□□□□ 0.04
HERPUD1-215ENST00000568676 ULK4Q96C45 1275 aa15.29■□□□□ 0.04
HERPUD1-215ENST00000568676 DCUN1D1Q96GG9 259 aa15.29■□□□□ 0.04
HERPUD1-215ENST00000568676 PACSIN1Q9BY11 444 aa15.29■□□□□ 0.04
HERPUD1-215ENST00000568676 DEF6Q9H4E7 631 aa15.29■□□□□ 0.04
HERPUD1-215ENST00000568676 TFB2MQ9H5Q4 396 aaKnown RBP15.29■□□□□ 0.04
HERPUD1-215ENST00000568676 LUZP4Q9P127 313 aa15.29■□□□□ 0.04
HERPUD1-215ENST00000568676 TRHDEQ9UKU6 1024 aa15.29■□□□□ 0.04
HERPUD1-215ENST00000568676 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.29■□□□□ 0.04
HERPUD1-215ENST00000568676 AP1M2Q9Y6Q5 423 aa15.29■□□□□ 0.04
HERPUD1-215ENST00000568676 CREBBPQ92793 2442 aa15.29■□□□□ 0.04
HERPUD1-215ENST00000568676 MED13Q9UHV7 2174 aa15.28■□□□□ 0.04
HERPUD1-215ENST00000568676 GSAPA4D1B5 854 aa15.28■□□□□ 0.04
HERPUD1-215ENST00000568676 ANKUB1A6NFN9 424 aa15.28■□□□□ 0.04
HERPUD1-215ENST00000568676 C5orf60A6NFR6 353 aa15.28■□□□□ 0.04
HERPUD1-215ENST00000568676 AGAP14A8MT82 685 aa15.28■□□□□ 0.04
HERPUD1-215ENST00000568676 C2orf74A8MZ97 194 aa15.28■□□□□ 0.04
HERPUD1-215ENST00000568676 CFAP99D6REC4 459 aa15.28■□□□□ 0.04
HERPUD1-215ENST00000568676 IFRD1O00458 451 aaPredicted RBP15.28■□□□□ 0.04
HERPUD1-215ENST00000568676 PEX12O00623 359 aa15.28■□□□□ 0.04
HERPUD1-215ENST00000568676 GPR39O43194 453 aa15.28■□□□□ 0.04
HERPUD1-215ENST00000568676 CLDN1O95832 211 aa15.28■□□□□ 0.04
HERPUD1-215ENST00000568676 CHRNA4P43681 627 aa15.28■□□□□ 0.04
HERPUD1-215ENST00000568676 CD151P48509 253 aa15.28■□□□□ 0.04
HERPUD1-215ENST00000568676 PRLHRP49683 370 aa15.28■□□□□ 0.04
HERPUD1-215ENST00000568676 DYNLT1P63172 113 aa15.28■□□□□ 0.04
HERPUD1-215ENST00000568676 NOMO1Q15155 1222 aa15.28■□□□□ 0.04
HERPUD1-215ENST00000568676 TAF1AQ15573 450 aaPredicted RBP15.28■□□□□ 0.04
HERPUD1-215ENST00000568676 PRAMEF17Q5VTA0 474 aa15.28■□□□□ 0.04
HERPUD1-215ENST00000568676 ZNF787Q6DD87 383 aa15.28■□□□□ 0.04
HERPUD1-215ENST00000568676 ZNF449Q6P9G9 518 aa15.28■□□□□ 0.04
HERPUD1-215ENST00000568676 SARM1Q6SZW1 724 aa15.28■□□□□ 0.04
HERPUD1-215ENST00000568676 DET1Q7L5Y6 550 aa15.28■□□□□ 0.04
HERPUD1-215ENST00000568676 PID1Q7Z2X4 250 aa15.28■□□□□ 0.04
HERPUD1-215ENST00000568676 MRGPREQ86SM8 312 aa15.28■□□□□ 0.04
HERPUD1-215ENST00000568676 CFAP206Q8IYR0 622 aa15.28■□□□□ 0.04
HERPUD1-215ENST00000568676 IPMKQ8NFU5 416 aa15.28■□□□□ 0.04
HERPUD1-215ENST00000568676 NACC2Q96BF6 587 aa15.28■□□□□ 0.04
HERPUD1-215ENST00000568676 RNF25Q96BH1 459 aaPredicted RBP15.28■□□□□ 0.04
HERPUD1-215ENST00000568676 RMDN2Q96LZ7 410 aa15.28■□□□□ 0.04
HERPUD1-215ENST00000568676 CHRNA10Q9GZZ6 450 aa15.28■□□□□ 0.04
HERPUD1-215ENST00000568676 ILKAPQ9H0C8 392 aaPredicted RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms