RNA–Protein interactions for RNA: ENST00000568586.5

RAB40C-211, Transcript of RAB40C, member RAS oncogene family, human

TSL 2

Gene RAB40C, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB40C-211	ENST00000568586	SEPHS1	P49903	392 aa		28.64	■■■□□ 2.18
RAB40C-211	ENST00000568586	CDK16	Q00536	496 aa		28.64	■■■□□ 2.18
RAB40C-211	ENST00000568586	MAP7	Q14244	749 aa		28.64	■■■□□ 2.18
RAB40C-211	ENST00000568586	PCID2	Q5JVF3	399 aa		28.64	■■■□□ 2.18
RAB40C-211	ENST00000568586	KIAA1614	Q5VZ46	1190 aa		28.64	■■■□□ 2.18
RAB40C-211	ENST00000568586	TIPARP	Q7Z3E1	657 aa	Known RBP	28.64	■■■□□ 2.18
RAB40C-211	ENST00000568586	KMT5C	Q86Y97	462 aa		28.64	■■■□□ 2.18
RAB40C-211	ENST00000568586	OR4L1	Q8NH43	312 aa		28.64	■■■□□ 2.18
RAB40C-211	ENST00000568586	TRIT1	Q9H3H1	467 aa	Known RBP	28.64	■■■□□ 2.18
RAB40C-211	ENST00000568586	HRASLS2	Q9NWW9	162 aa		28.64	■■■□□ 2.18
RAB40C-211	ENST00000568586	IGHV5-51	A0A0C4DH38	117 aa		28.63	■■■□□ 2.17
RAB40C-211	ENST00000568586	GOLGA6L3	A6NEY3	463 aa		28.63	■■■□□ 2.17
RAB40C-211	ENST00000568586	LIN7A	O14910	233 aa	Predicted RBP	28.63	■■■□□ 2.17
RAB40C-211	ENST00000568586	STK17B	O94768	372 aa		28.63	■■■□□ 2.17
RAB40C-211	ENST00000568586	ITGB2	P05107	769 aa		28.63	■■■□□ 2.17
RAB40C-211	ENST00000568586	FGF5	P12034	268 aa		28.63	■■■□□ 2.17
RAB40C-211	ENST00000568586	PDHA2	P29803	388 aa		28.63	■■■□□ 2.17
RAB40C-211	ENST00000568586	SH3BP2	P78314	561 aa		28.63	■■■□□ 2.17
RAB40C-211	ENST00000568586	GSE1	Q14687	1217 aa		28.63	■■■□□ 2.17
RAB40C-211	ENST00000568586	GSTA5	Q7RTV2	222 aa		28.63	■■■□□ 2.17
RAB40C-211	ENST00000568586	REXO1L1P	Q8IX06	675 aa		28.63	■■■□□ 2.17
RAB40C-211	ENST00000568586	NLGN4X	Q8N0W4	816 aa		28.63	■■■□□ 2.17
RAB40C-211	ENST00000568586	IL22RA1	Q8N6P7	574 aa		28.63	■■■□□ 2.17
RAB40C-211	ENST00000568586	ACVR1C	Q8NER5	493 aa		28.63	■■■□□ 2.17
RAB40C-211	ENST00000568586	NLGN4Y	Q8NFZ3	816 aa	Predicted RBP	28.63	■■■□□ 2.17
RAB40C-211	ENST00000568586	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	28.63	■■■□□ 2.17	2e-6	■■■■■ 54.9
RAB40C-211	ENST00000568586	PBK	Q96KB5	322 aa		28.63	■■■□□ 2.17
RAB40C-211	ENST00000568586	MVB12B	Q9H7P6	319 aa		28.63	■■■□□ 2.17
RAB40C-211	ENST00000568586	TLCD2	A6NGC4	264 aa		28.62	■■■□□ 2.17
RAB40C-211	ENST00000568586	EIF4E1B	A6NMX2	242 aa	Known RBP	28.62	■■■□□ 2.17
RAB40C-211	ENST00000568586	C1QL1	O75973	258 aa		28.62	■■■□□ 2.17
RAB40C-211	ENST00000568586	NPY2R	P49146	381 aa		28.62	■■■□□ 2.17
RAB40C-211	ENST00000568586	ZNF449	Q6P9G9	518 aa		28.62	■■■□□ 2.17
RAB40C-211	ENST00000568586	OOSP2	Q86WS3	158 aa		28.62	■■■□□ 2.17
RAB40C-211	ENST00000568586	ZSCAN1	Q8NBB4	408 aa		28.62	■■■□□ 2.17
RAB40C-211	ENST00000568586	PPHLN1	Q8NEY8	458 aa	Known RBP	28.62	■■■□□ 2.17
RAB40C-211	ENST00000568586	OR6C1	Q96RD1	312 aa		28.62	■■■□□ 2.17
RAB40C-211	ENST00000568586	TTC1	Q99614	292 aa		28.62	■■■□□ 2.17
RAB40C-211	ENST00000568586	IL22	Q9GZX6	179 aa		28.62	■■■□□ 2.17
RAB40C-211	ENST00000568586	TFB2M	Q9H5Q4	396 aa	Known RBP	28.62	■■■□□ 2.17
RAB40C-211	ENST00000568586	WDR70	Q9NW82	654 aa		28.62	■■■□□ 2.17
RAB40C-211	ENST00000568586	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	28.61	■■■□□ 2.17
RAB40C-211	ENST00000568586	IFRD1	O00458	451 aa	Predicted RBP	28.61	■■■□□ 2.17
RAB40C-211	ENST00000568586	FTH1	P02794	183 aa		28.61	■■■□□ 2.17
RAB40C-211	ENST00000568586	TPSB2	P20231	275 aa		28.61	■■■□□ 2.17
RAB40C-211	ENST00000568586	MAGEA6	P43360	314 aa		28.61	■■■□□ 2.17
RAB40C-211	ENST00000568586	FOXM1	Q08050	763 aa		28.61	■■■□□ 2.17
RAB40C-211	ENST00000568586	ABHD18	Q0P651	414 aa		28.61	■■■□□ 2.17
RAB40C-211	ENST00000568586	BOP1	Q14137	746 aa	Known RBP	28.61	■■■□□ 2.17
RAB40C-211	ENST00000568586	TPSAB1	Q15661	275 aa		28.61	■■■□□ 2.17
RAB40C-211	ENST00000568586	TAF1B	Q53T94	588 aa	Predicted RBP	28.61	■■■□□ 2.17
RAB40C-211	ENST00000568586	MAP3K3	Q99759	626 aa		28.61	■■■□□ 2.17
RAB40C-211	ENST00000568586	SLC12A9	Q9BXP2	914 aa		28.61	■■■□□ 2.17
RAB40C-211	ENST00000568586	CHRAC1	Q9NRG0	131 aa		28.61	■■■□□ 2.17
RAB40C-211	ENST00000568586	TREX1	Q9NSU2	369 aa		28.61	■■■□□ 2.17
RAB40C-211	ENST00000568586	OR6C74	A6NCV1	312 aa		28.6	■■■□□ 2.17
RAB40C-211	ENST00000568586	LIF	P15018	202 aa		28.6	■■■□□ 2.17
RAB40C-211	ENST00000568586	BASP1	P80723	227 aa	Known RBP	28.6	■■■□□ 2.17
RAB40C-211	ENST00000568586	PLOD1	Q02809	727 aa	Predicted RBP	28.6	■■■□□ 2.17
RAB40C-211	ENST00000568586	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	28.6	■■■□□ 2.17
RAB40C-211	ENST00000568586	DNTTIP2	Q5QJE6	756 aa	Known RBP	28.6	■■■□□ 2.17
RAB40C-211	ENST00000568586	CYB5D1	Q6P9G0	228 aa		28.6	■■■□□ 2.17
RAB40C-211	ENST00000568586	OR6P1	Q8NGX9	317 aa		28.6	■■■□□ 2.17
RAB40C-211	ENST00000568586	TFG	Q92734	400 aa	Predicted RBP	28.6	■■■□□ 2.17
RAB40C-211	ENST00000568586	FCRL4	Q96PJ5	515 aa		28.6	■■■□□ 2.17
RAB40C-211	ENST00000568586	SLC5A10	A0PJK1	596 aa		28.59	■■■□□ 2.17
RAB40C-211	ENST00000568586	MATN2	O00339	956 aa		28.59	■■■□□ 2.17
RAB40C-211	ENST00000568586	OR1I1	O60431	355 aa		28.59	■■■□□ 2.17
RAB40C-211	ENST00000568586	OR56A5	P0C7T3	313 aa		28.59	■■■□□ 2.17
RAB40C-211	ENST00000568586	ACADL	P28330	430 aa		28.59	■■■□□ 2.17
RAB40C-211	ENST00000568586	PREP	P48147	710 aa		28.59	■■■□□ 2.17
RAB40C-211	ENST00000568586	PRAME	P78395	509 aa		28.59	■■■□□ 2.17
RAB40C-211	ENST00000568586	KRT33B	Q14525	404 aa		28.59	■■■□□ 2.17
RAB40C-211	ENST00000568586	CYP1B1	Q16678	543 aa		28.59	■■■□□ 2.17
RAB40C-211	ENST00000568586	ARMC3	Q5W041	872 aa		28.59	■■■□□ 2.17
RAB40C-211	ENST00000568586	LRRC8B	Q6P9F7	803 aa		28.59	■■■□□ 2.17
RAB40C-211	ENST00000568586	BPHL	Q86WA6	291 aa	Predicted RBP	28.59	■■■□□ 2.17
RAB40C-211	ENST00000568586	D2HGDH	Q8N465	521 aa		28.59	■■■□□ 2.17
RAB40C-211	ENST00000568586	FERD3L	Q96RJ6	166 aa		28.59	■■■□□ 2.17
RAB40C-211	ENST00000568586	BFAR	Q9NZS9	450 aa		28.59	■■■□□ 2.17
RAB40C-211	ENST00000568586	COL6A6	A6NMZ7	2263 aa		28.59	■■■□□ 2.17
RAB40C-211	ENST00000568586		F8W8V4	182 aa		28.58	■■■□□ 2.17
RAB40C-211	ENST00000568586	ZNF28	P17035	718 aa		28.58	■■■□□ 2.17
RAB40C-211	ENST00000568586	PPARG	P37231	505 aa	Predicted RBP	28.58	■■■□□ 2.17
RAB40C-211	ENST00000568586	SESN2	P58004	480 aa	Predicted RBP	28.58	■■■□□ 2.17
RAB40C-211	ENST00000568586	HSD11B2	P80365	405 aa		28.58	■■■□□ 2.17
RAB40C-211	ENST00000568586	SEMA3A	Q14563	771 aa		28.58	■■■□□ 2.17
RAB40C-211	ENST00000568586	FASTKD1	Q53R41	847 aa	Known RBP	28.58	■■■□□ 2.17
RAB40C-211	ENST00000568586	TTC27	Q6P3X3	843 aa		28.58	■■■□□ 2.17
RAB40C-211	ENST00000568586	ESX1	Q8N693	406 aa		28.58	■■■□□ 2.17
RAB40C-211	ENST00000568586	OR4E2	Q8NGC2	313 aa		28.58	■■■□□ 2.17
RAB40C-211	ENST00000568586	LCN9	Q8WX39	176 aa		28.58	■■■□□ 2.17
RAB40C-211	ENST00000568586	SLC45A3	Q96JT2	553 aa		28.58	■■■□□ 2.17
RAB40C-211	ENST00000568586	KIFC1	Q9BW19	673 aa		28.58	■■■□□ 2.17
RAB40C-211	ENST00000568586	MRM3	Q9HC36	420 aa	Known RBP	28.58	■■■□□ 2.17
RAB40C-211	ENST00000568586	POMT2	Q9UKY4	750 aa		28.58	■■■□□ 2.17
RAB40C-211	ENST00000568586	BHMG1	C9JSJ3	638 aa	Predicted RBP	28.57	■■■□□ 2.16
RAB40C-211	ENST00000568586	PRB1	P04280	392 aa		28.57	■■■□□ 2.16
RAB40C-211	ENST00000568586	FOLR1	P15328	257 aa		28.57	■■■□□ 2.16
RAB40C-211	ENST00000568586	KPNA2	P52292	529 aa	Known RBP	28.57	■■■□□ 2.16

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