RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 TBR1Q16650 682 aa4.67□□□□□ -1.66
CLK3-219ENST00000567805 SKIDA1Q1XH10 827 aa4.67□□□□□ -1.66
CLK3-219ENST00000567805 LINC00303Q3SY05 128 aa4.67□□□□□ -1.66
CLK3-219ENST00000567805 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.67□□□□□ -1.66
CLK3-219ENST00000567805 CRTC2Q53ET0 693 aaPredicted RBP4.67□□□□□ -1.66
CLK3-219ENST00000567805 ZRANB3Q5FWF4 1079 aa4.67□□□□□ -1.66
CLK3-219ENST00000567805 MEI1Q5TIA1 1274 aa4.67□□□□□ -1.66
CLK3-219ENST00000567805 CACHD1Q5VU97 1274 aa4.67□□□□□ -1.66
CLK3-219ENST00000567805 LYPLAL1Q5VWZ2 237 aa4.67□□□□□ -1.66
CLK3-219ENST00000567805 CAPRIN2Q6IMN6 1127 aaKnown RBP4.67□□□□□ -1.66
CLK3-219ENST00000567805 ARMC6Q6NXE6 501 aa4.67□□□□□ -1.66
CLK3-219ENST00000567805 ZNF449Q6P9G9 518 aa4.67□□□□□ -1.66
CLK3-219ENST00000567805 BORAQ6PGQ7 559 aa4.67□□□□□ -1.66
CLK3-219ENST00000567805 C4orf22Q6V702 233 aa4.67□□□□□ -1.66
CLK3-219ENST00000567805 PACS1Q6VY07 963 aa4.67□□□□□ -1.66
CLK3-219ENST00000567805 FAM92BQ6ZTR7 304 aa4.67□□□□□ -1.66
CLK3-219ENST00000567805 TAS2R42Q7RTR8 314 aa4.67□□□□□ -1.66
CLK3-219ENST00000567805 TIPARPQ7Z3E1 657 aaKnown RBP4.67□□□□□ -1.66
CLK3-219ENST00000567805 ZNF605Q86T29 641 aa4.67□□□□□ -1.66
CLK3-219ENST00000567805 BPHLQ86WA6 291 aaPredicted RBP4.67□□□□□ -1.66
CLK3-219ENST00000567805 SERPINA9Q86WD7 417 aa4.67□□□□□ -1.66
CLK3-219ENST00000567805 OOSP2Q86WS3 158 aa4.67□□□□□ -1.66
CLK3-219ENST00000567805 PPP1R3BQ86XI6 285 aa4.67□□□□□ -1.66
CLK3-219ENST00000567805 KMT5CQ86Y97 462 aa4.67□□□□□ -1.66
CLK3-219ENST00000567805 SLC13A5Q86YT5 568 aaPredicted RBP4.67□□□□□ -1.66
CLK3-219ENST00000567805 RASGRP3Q8IV61 690 aa4.67□□□□□ -1.66
CLK3-219ENST00000567805 CARFQ8N187 725 aa4.67□□□□□ -1.66
CLK3-219ENST00000567805 ESX1Q8N693 406 aa4.67□□□□□ -1.66
CLK3-219ENST00000567805 CCDC89Q8N998 374 aa4.67□□□□□ -1.66
CLK3-219ENST00000567805 DNAAF3Q8N9W5 541 aa4.67□□□□□ -1.66
CLK3-219ENST00000567805 SIDT2Q8NBJ9 832 aaKnown RBP4.67□□□□□ -1.66
CLK3-219ENST00000567805 ATG4AQ8WYN0 398 aa4.67□□□□□ -1.66
CLK3-219ENST00000567805 EXTL1Q92935 676 aa4.67□□□□□ -1.66
CLK3-219ENST00000567805 KIAA1143Q96AT1 154 aaPredicted RBP4.67□□□□□ -1.66
CLK3-219ENST00000567805 CDKN2AIPNLQ96HQ2 116 aa4.67□□□□□ -1.66
CLK3-219ENST00000567805 SLC45A3Q96JT2 553 aa4.67□□□□□ -1.66
CLK3-219ENST00000567805 SLC41A2Q96JW4 573 aa4.67□□□□□ -1.66
CLK3-219ENST00000567805 RMDN2Q96LZ7 410 aa4.67□□□□□ -1.66
CLK3-219ENST00000567805 CATSPER2Q96P56 530 aa4.67□□□□□ -1.66
CLK3-219ENST00000567805 FCRL4Q96PJ5 515 aa4.67□□□□□ -1.66
CLK3-219ENST00000567805 OR6C1Q96RD1 312 aa4.67□□□□□ -1.66
CLK3-219ENST00000567805 INSM2Q96T92 566 aaPredicted RBP4.67□□□□□ -1.66
CLK3-219ENST00000567805 ARHGAP9Q9BRR9 750 aa4.67□□□□□ -1.66
CLK3-219ENST00000567805 SLC12A9Q9BXP2 914 aa4.67□□□□□ -1.66
CLK3-219ENST00000567805 ULBP3Q9BZM4 244 aa4.67□□□□□ -1.66
CLK3-219ENST00000567805 SEMA4CQ9C0C4 833 aa4.67□□□□□ -1.66
CLK3-219ENST00000567805 FAM96AQ9H5X1 160 aa4.67□□□□□ -1.66
CLK3-219ENST00000567805 KIR3DX1Q9H7L2 352 aa4.67□□□□□ -1.66
CLK3-219ENST00000567805 COG4Q9H9E3 785 aa4.67□□□□□ -1.66
CLK3-219ENST00000567805 GPN2Q9H9Y4 310 aaPredicted RBP4.67□□□□□ -1.66
CLK3-219ENST00000567805 ETNK1Q9HBU6 452 aa4.67□□□□□ -1.66
CLK3-219ENST00000567805 HRASLS2Q9NWW9 162 aa4.67□□□□□ -1.66
CLK3-219ENST00000567805 PAK5Q9P286 719 aa4.67□□□□□ -1.66
CLK3-219ENST00000567805 FAM8A1Q9UBU6 413 aa4.67□□□□□ -1.66
CLK3-219ENST00000567805 RIMKLBQ9ULI2 386 aa4.67□□□□□ -1.66
CLK3-219ENST00000567805 ZNF148Q9UQR1 794 aa4.67□□□□□ -1.66
CLK3-219ENST00000567805 ZKSCAN5Q9Y2L8 839 aa4.67□□□□□ -1.66
CLK3-219ENST00000567805 CFAP20Q9Y6A4 193 aaKnown RBP4.67□□□□□ -1.66
CLK3-219ENST00000567805 COL6A6A6NMZ7 2263 aa4.67□□□□□ -1.66
CLK3-219ENST00000567805 SNRNP200O75643 2136 aaKnown RBP4.66□□□□□ -1.66
CLK3-219ENST00000567805 LOC101059948A0A1B0GTJ6 334 aa4.66□□□□□ -1.66
CLK3-219ENST00000567805 UBA6A0AVT1 1052 aaPredicted RBP4.66□□□□□ -1.66
CLK3-219ENST00000567805 HEATR9A2RTY3 570 aa4.66□□□□□ -1.66
CLK3-219ENST00000567805 CCDC162PA2VCL2 907 aa4.66□□□□□ -1.66
CLK3-219ENST00000567805 OR6C74A6NCV1 312 aa4.66□□□□□ -1.66
CLK3-219ENST00000567805 GOLGA6L3A6NEY3 463 aa4.66□□□□□ -1.66
CLK3-219ENST00000567805 B8ZZF3 427 aa4.66□□□□□ -1.66
CLK3-219ENST00000567805 F8W8V4 182 aa4.66□□□□□ -1.66
CLK3-219ENST00000567805 AP3B1O00203 1094 aa4.66□□□□□ -1.66
CLK3-219ENST00000567805 MATN2O00339 956 aa4.66□□□□□ -1.66
CLK3-219ENST00000567805 IFRD1O00458 451 aaPredicted RBP4.66□□□□□ -1.66
CLK3-219ENST00000567805 LIN7AO14910 233 aaPredicted RBP4.66□□□□□ -1.66
CLK3-219ENST00000567805 NRDCO43847 1150 aa4.66□□□□□ -1.66
CLK3-219ENST00000567805 KIF1CO43896 1103 aaKnown RBP4.66□□□□□ -1.66
CLK3-219ENST00000567805 SPAG6O75602 509 aa4.66□□□□□ -1.66
CLK3-219ENST00000567805 KIAA0754O94854 1291 aa4.66□□□□□ -1.66
CLK3-219ENST00000567805 ZBTB11O95625 1053 aaPredicted RBP4.66□□□□□ -1.66
CLK3-219ENST00000567805 FTH1P02794 183 aa4.66□□□□□ -1.66
CLK3-219ENST00000567805 MT-ND3P03897 115 aa4.66□□□□□ -1.66
CLK3-219ENST00000567805 POLBP06746 335 aa4.66□□□□□ -1.66
CLK3-219ENST00000567805 APRTP07741 180 aa4.66□□□□□ -1.66
CLK3-219ENST00000567805 FAM87AP0C7U9 286 aa4.66□□□□□ -1.66
CLK3-219ENST00000567805 CCNYL3P0C7X3 344 aa4.66□□□□□ -1.66
CLK3-219ENST00000567805 PRSS56P0CW18 603 aa4.66□□□□□ -1.66
CLK3-219ENST00000567805 PLA2G2AP14555 144 aa4.66□□□□□ -1.66
CLK3-219ENST00000567805 ZNF28P17035 718 aa4.66□□□□□ -1.66
CLK3-219ENST00000567805 ADRA1DP25100 572 aa4.66□□□□□ -1.66
CLK3-219ENST00000567805 FOXN2P32314 431 aa4.66□□□□□ -1.66
CLK3-219ENST00000567805 ARL4DP49703 201 aa4.66□□□□□ -1.66
CLK3-219ENST00000567805 CDKN1CP49918 316 aaPredicted RBP4.66□□□□□ -1.66
CLK3-219ENST00000567805 PPP1CAP62136 330 aa4.66□□□□□ -1.66
CLK3-219ENST00000567805 CYP4F2P78329 520 aa4.66□□□□□ -1.66
CLK3-219ENST00000567805 HSD11B2P80365 405 aa4.66□□□□□ -1.66
CLK3-219ENST00000567805 PLOD1Q02809 727 aaPredicted RBP4.66□□□□□ -1.66
CLK3-219ENST00000567805 ACY1Q03154 408 aa4.66□□□□□ -1.66
CLK3-219ENST00000567805 ACVR1Q04771 509 aa4.66□□□□□ -1.66
CLK3-219ENST00000567805 CDC20Q12834 499 aa4.66□□□□□ -1.66
CLK3-219ENST00000567805 PRKAA1Q13131 559 aa4.66□□□□□ -1.66
CLK3-219ENST00000567805 TUBB3Q13509 450 aa4.66□□□□□ -1.66
CLK3-219ENST00000567805 SEMA5AQ13591 1074 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms