RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, human

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF3B3-209	ENST00000567635	OR6C1	Q96RD1	312 aa		6.75	□□□□□ -1.33
SF3B3-209	ENST00000567635	FERD3L	Q96RJ6	166 aa		6.75	□□□□□ -1.33
SF3B3-209	ENST00000567635	TTC1	Q99614	292 aa		6.75	□□□□□ -1.33
SF3B3-209	ENST00000567635	ARHGAP9	Q9BRR9	750 aa		6.75	□□□□□ -1.33
SF3B3-209	ENST00000567635	EFHD1	Q9BUP0	239 aa		6.75	□□□□□ -1.33
SF3B3-209	ENST00000567635	SLC12A9	Q9BXP2	914 aa		6.75	□□□□□ -1.33
SF3B3-209	ENST00000567635	KIR3DX1	Q9H7L2	352 aa		6.75	□□□□□ -1.33
SF3B3-209	ENST00000567635	RAB6B	Q9NRW1	208 aa		6.75	□□□□□ -1.33
SF3B3-209	ENST00000567635	HOMER3	Q9NSC5	361 aa		6.75	□□□□□ -1.33
SF3B3-209	ENST00000567635	HRASLS2	Q9NWW9	162 aa		6.75	□□□□□ -1.33
SF3B3-209	ENST00000567635	SIDT1	Q9NXL6	827 aa	Known RBP	6.75	□□□□□ -1.33
SF3B3-209	ENST00000567635	SMARCAL1	Q9NZC9	954 aa		6.75	□□□□□ -1.33
SF3B3-209	ENST00000567635	SEMA5B	Q9P283	1151 aa		6.75	□□□□□ -1.33
SF3B3-209	ENST00000567635	PAK5	Q9P286	719 aa		6.75	□□□□□ -1.33
SF3B3-209	ENST00000567635	SLC24A2	Q9UI40	661 aa		6.75	□□□□□ -1.33
SF3B3-209	ENST00000567635	RIMKLB	Q9ULI2	386 aa		6.75	□□□□□ -1.33
SF3B3-209	ENST00000567635	ZKSCAN5	Q9Y2L8	839 aa		6.75	□□□□□ -1.33
SF3B3-209	ENST00000567635	LOC400499	M0QZD8	3231 aa		6.75	□□□□□ -1.33
SF3B3-209	ENST00000567635	NBAS	A2RRP1	2371 aa		6.75	□□□□□ -1.33
SF3B3-209	ENST00000567635	MDC1	Q14676	2089 aa	Known RBP	6.75	□□□□□ -1.33
SF3B3-209	ENST00000567635	CFAP46	Q8IYW2	2715 aa		6.74	□□□□□ -1.33
SF3B3-209	ENST00000567635	IGHV5-51	A0A0C4DH38	117 aa		6.74	□□□□□ -1.33
SF3B3-209	ENST00000567635	LOC101059948	A0A1B0GTJ6	334 aa		6.74	□□□□□ -1.33
SF3B3-209	ENST00000567635	UBA6	A0AVT1	1052 aa	Predicted RBP	6.74	□□□□□ -1.33
SF3B3-209	ENST00000567635	CCDC162P	A2VCL2	907 aa		6.74	□□□□□ -1.33
SF3B3-209	ENST00000567635	ZNF891	A8MT65	544 aa	Predicted RBP	6.74	□□□□□ -1.33
SF3B3-209	ENST00000567635		F8W8V4	182 aa		6.74	□□□□□ -1.33
SF3B3-209	ENST00000567635	QSOX1	O00391	747 aa		6.74	□□□□□ -1.33
SF3B3-209	ENST00000567635	IFRD1	O00458	451 aa	Predicted RBP	6.74	□□□□□ -1.33
SF3B3-209	ENST00000567635	CEP104	O60308	925 aa		6.74	□□□□□ -1.33
SF3B3-209	ENST00000567635	C1QL1	O75973	258 aa		6.74	□□□□□ -1.33
SF3B3-209	ENST00000567635	DLGAP3	O95886	979 aa		6.74	□□□□□ -1.33
SF3B3-209	ENST00000567635	FGG	P02679	453 aa		6.74	□□□□□ -1.33
SF3B3-209	ENST00000567635	APRT	P07741	180 aa		6.74	□□□□□ -1.33
SF3B3-209	ENST00000567635	CCNYL3	P0C7X3	344 aa		6.74	□□□□□ -1.33
SF3B3-209	ENST00000567635	PRSS56	P0CW18	603 aa		6.74	□□□□□ -1.33
SF3B3-209	ENST00000567635	SFTPC	P11686	197 aa		6.74	□□□□□ -1.33
SF3B3-209	ENST00000567635	FGF5	P12034	268 aa		6.74	□□□□□ -1.33
SF3B3-209	ENST00000567635	MSN	P26038	577 aa	Known RBP	6.74	□□□□□ -1.33
SF3B3-209	ENST00000567635	PDHA2	P29803	388 aa		6.74	□□□□□ -1.33
SF3B3-209	ENST00000567635	RPL22	P35268	128 aa	Known RBP	6.74	□□□□□ -1.33
SF3B3-209	ENST00000567635	PPARG	P37231	505 aa	Predicted RBP	6.74	□□□□□ -1.33
SF3B3-209	ENST00000567635	GRIA1	P42261	906 aa		6.74	□□□□□ -1.33
SF3B3-209	ENST00000567635	NSG1	P42857	185 aa		6.74	□□□□□ -1.33
SF3B3-209	ENST00000567635	CD151	P48509	253 aa		6.74	□□□□□ -1.33
SF3B3-209	ENST00000567635	ARL4D	P49703	201 aa		6.74	□□□□□ -1.33
SF3B3-209	ENST00000567635	SH3BP2	P78314	561 aa		6.74	□□□□□ -1.33
SF3B3-209	ENST00000567635	CYP4F2	P78329	520 aa		6.74	□□□□□ -1.33
SF3B3-209	ENST00000567635	HSD11B2	P80365	405 aa		6.74	□□□□□ -1.33
SF3B3-209	ENST00000567635	ABHD18	Q0P651	414 aa		6.74	□□□□□ -1.33
SF3B3-209	ENST00000567635	RPA4	Q13156	261 aa		6.74	□□□□□ -1.33
SF3B3-209	ENST00000567635	SEMA5A	Q13591	1074 aa		6.74	□□□□□ -1.33
SF3B3-209	ENST00000567635	MAP7	Q14244	749 aa		6.74	□□□□□ -1.33
SF3B3-209	ENST00000567635	SIX1	Q15475	284 aa	Predicted RBP	6.74	□□□□□ -1.33
SF3B3-209	ENST00000567635	DBN1	Q16643	649 aa		6.74	□□□□□ -1.33
SF3B3-209	ENST00000567635	TBR1	Q16650	682 aa		6.74	□□□□□ -1.33
SF3B3-209	ENST00000567635	LINC00303	Q3SY05	128 aa		6.74	□□□□□ -1.33
SF3B3-209	ENST00000567635	ZNF658B	Q4V348	819 aa	Predicted RBP	6.74	□□□□□ -1.33
SF3B3-209	ENST00000567635	DNTTIP2	Q5QJE6	756 aa	Known RBP	6.74	□□□□□ -1.33
SF3B3-209	ENST00000567635	TSTD2	Q5T7W7	516 aa		6.74	□□□□□ -1.33
SF3B3-209	ENST00000567635	C6orf15	Q6UXA7	325 aa	Predicted RBP	6.74	□□□□□ -1.33
SF3B3-209	ENST00000567635	CERS6	Q6ZMG9	384 aa		6.74	□□□□□ -1.33
SF3B3-209	ENST00000567635	GSTA5	Q7RTV2	222 aa		6.74	□□□□□ -1.33
SF3B3-209	ENST00000567635	ZNF605	Q86T29	641 aa		6.74	□□□□□ -1.33
SF3B3-209	ENST00000567635	PRUNE1	Q86TP1	453 aa		6.74	□□□□□ -1.33
SF3B3-209	ENST00000567635	BPHL	Q86WA6	291 aa	Predicted RBP	6.74	□□□□□ -1.33
SF3B3-209	ENST00000567635	OOSP2	Q86WS3	158 aa		6.74	□□□□□ -1.33
SF3B3-209	ENST00000567635	PPP1R3B	Q86XI6	285 aa		6.74	□□□□□ -1.33
SF3B3-209	ENST00000567635	KMT5C	Q86Y97	462 aa		6.74	□□□□□ -1.33
SF3B3-209	ENST00000567635	RASGRP3	Q8IV61	690 aa		6.74	□□□□□ -1.33
SF3B3-209	ENST00000567635	ESX1	Q8N693	406 aa		6.74	□□□□□ -1.33
SF3B3-209	ENST00000567635	CLDN19	Q8N6F1	224 aa		6.74	□□□□□ -1.33
SF3B3-209	ENST00000567635	EXD3	Q8N9H8	876 aa		6.74	□□□□□ -1.33
SF3B3-209	ENST00000567635	GLIS1	Q8NBF1	620 aa		6.74	□□□□□ -1.33
SF3B3-209	ENST00000567635	SIDT2	Q8NBJ9	832 aa	Known RBP	6.74	□□□□□ -1.33
SF3B3-209	ENST00000567635	ACVR1C	Q8NER5	493 aa		6.74	□□□□□ -1.33
SF3B3-209	ENST00000567635	OR4E2	Q8NGC2	313 aa		6.74	□□□□□ -1.33
SF3B3-209	ENST00000567635	OR6P1	Q8NGX9	317 aa		6.74	□□□□□ -1.33
SF3B3-209	ENST00000567635	LCN9	Q8WX39	176 aa		6.74	□□□□□ -1.33
SF3B3-209	ENST00000567635	EXTL1	Q92935	676 aa		6.74	□□□□□ -1.33
SF3B3-209	ENST00000567635	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	6.74	□□□□□ -1.33
SF3B3-209	ENST00000567635	SGSM3	Q96HU1	749 aa		6.74	□□□□□ -1.33
SF3B3-209	ENST00000567635	ELMO2	Q96JJ3	720 aa		6.74	□□□□□ -1.33
SF3B3-209	ENST00000567635	SLC45A3	Q96JT2	553 aa		6.74	□□□□□ -1.33
SF3B3-209	ENST00000567635	RMDN2	Q96LZ7	410 aa		6.74	□□□□□ -1.33
SF3B3-209	ENST00000567635	FCRL4	Q96PJ5	515 aa		6.74	□□□□□ -1.33
SF3B3-209	ENST00000567635	RANBP9	Q96S59	729 aa		6.74	□□□□□ -1.33
SF3B3-209	ENST00000567635	CD180	Q99467	661 aa		6.74	□□□□□ -1.33
SF3B3-209	ENST00000567635	MAP3K3	Q99759	626 aa		6.74	□□□□□ -1.33
SF3B3-209	ENST00000567635	TLR10	Q9BXR5	811 aa		6.74	□□□□□ -1.33
SF3B3-209	ENST00000567635	ULBP3	Q9BZM4	244 aa		6.74	□□□□□ -1.33
SF3B3-209	ENST00000567635	OR52A5	Q9H2C5	316 aa		6.74	□□□□□ -1.33
SF3B3-209	ENST00000567635	SRMS	Q9H3Y6	488 aa		6.74	□□□□□ -1.33
SF3B3-209	ENST00000567635	MVB12B	Q9H7P6	319 aa		6.74	□□□□□ -1.33
SF3B3-209	ENST00000567635	COG4	Q9H9E3	785 aa		6.74	□□□□□ -1.33
SF3B3-209	ENST00000567635	GPN2	Q9H9Y4	310 aa	Predicted RBP	6.74	□□□□□ -1.33
SF3B3-209	ENST00000567635	PDE7B	Q9NP56	450 aa		6.74	□□□□□ -1.33
SF3B3-209	ENST00000567635	CASS4	Q9NQ75	786 aa		6.74	□□□□□ -1.33
SF3B3-209	ENST00000567635	PPP2R2C	Q9Y2T4	447 aa		6.74	□□□□□ -1.33
SF3B3-209	ENST00000567635	GCN1	Q92616	2671 aa	Known RBP	6.74	□□□□□ -1.33

Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms