RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 ACOT2P49753 483 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 PGDP52209 483 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 IMPG1Q17R60 797 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 HYAL4Q2M3T9 481 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 PYHIN1Q6K0P9 492 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 SLC46A3Q7Z3Q1 461 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 NLGN4XQ8N0W4 816 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 ZNF781Q8N8C0 355 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 TMEM35BQ8NCS4 154 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 BPIFB6Q8NFQ5 453 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 CYGBQ8WWM9 190 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 HERVK_113Q902F9 699 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 TBCBQ99426 244 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 RSAD1Q9HA92 442 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 KLHL8Q9P2G9 620 aaPredicted RBP2.88□□□□□ -1.95
CHD9-218ENST00000566029 LSM8O95777 96 aaKnown RBP2.88□□□□□ -1.95
CHD9-218ENST00000566029 BPNT1O95861 308 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 NSFP46459 744 aaKnown RBP2.88□□□□□ -1.95
CHD9-218ENST00000566029 RFX2P48378 723 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 ARHGDIAP52565 204 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 ODF4Q2M2E3 257 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 VARS2Q5ST30 1063 aaKnown RBP2.88□□□□□ -1.95
CHD9-218ENST00000566029 TPRG1LQ5T0D9 272 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 SYT6Q5T7P8 510 aaPredicted RBP2.88□□□□□ -1.95
CHD9-218ENST00000566029 SLC39A4Q6P5W5 647 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 KCTD1Q719H9 257 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 CCDC190Q86UF4 302 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 SYTL1Q8IYJ3 562 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 ADGRF4Q8IZF3 695 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 NAT16Q8N8M0 369 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 SLC44A5Q8NCS7 719 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 PROX1Q92786 737 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 HDAC10Q969S8 669 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 EIF2AK1Q9BQI3 630 aaKnown RBP2.88□□□□□ -1.95
CHD9-218ENST00000566029 TEKT3Q9BXF9 490 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 TINAGL1Q9GZM7 467 aaPredicted RBP2.88□□□□□ -1.95
CHD9-218ENST00000566029 FAM49AQ9H0Q0 323 aaPredicted RBP2.88□□□□□ -1.95
CHD9-218ENST00000566029 TMEM168Q9H0V1 697 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 SLC52A3Q9NQ40 469 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 CTPS2Q9NRF8 586 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 GAKO14976 1311 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 WNK3Q9BYP7 1800 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 TBX1O43435 398 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 NPHS1O60500 1241 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 CABYRO75952 493 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 AHSA1O95433 338 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 CYP2A6P11509 494 aaPredicted RBP2.88□□□□□ -1.95
CHD9-218ENST00000566029 DHPSP49366 369 aaPredicted RBP2.88□□□□□ -1.95
CHD9-218ENST00000566029 PIGFQ07326 219 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 KCNC3Q14003 757 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 HKDC1Q2TB90 917 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 NIPA2Q8N8Q9 360 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 MUS81Q96NY9 551 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 CITED1Q99966 193 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 FEM1AQ9BSK4 669 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 ZNF471Q9BX82 626 aaPredicted RBP2.88□□□□□ -1.95
CHD9-218ENST00000566029 ITM2CQ9NQX7 267 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 CXXC1Q9P0U4 656 aaPredicted RBP2.88□□□□□ -1.95
CHD9-218ENST00000566029 ANAPC2Q9UJX6 822 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 ZNF223Q9UK11 482 aaPredicted RBP2.88□□□□□ -1.95
CHD9-218ENST00000566029 PPIEQ9UNP9 301 aaKnown RBP2.88□□□□□ -1.95
CHD9-218ENST00000566029 PCDHGB1Q9Y5G3 927 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 LAMB2P55268 1798 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 BCLAF3A2AJT9 711 aaKnown RBP2.88□□□□□ -1.95
CHD9-218ENST00000566029 WTIPA6NIX2 430 aaPredicted RBP2.88□□□□□ -1.95
CHD9-218ENST00000566029 ZNF879B4DU55 563 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 NUPL2O15504 423 aaKnown RBP2.88□□□□□ -1.95
CHD9-218ENST00000566029 ENDOD1O94919 500 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 ASNSP08243 561 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 GADD45AP24522 165 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 KLRK1P26718 216 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 GTF2E2P29084 291 aaKnown RBP2.88□□□□□ -1.95
CHD9-218ENST00000566029 SERPINB5P36952 375 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 FHITP49789 147 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 FOXM1Q08050 763 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 DAG1Q14118 895 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 QRICH1Q2TAL8 776 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 C6orf132Q5T0Z8 1188 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 RASGRP3Q8IV61 690 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 MICU2Q8IYU8 434 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 POF1BQ8WVV4 589 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 RFT1Q96AA3 541 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 TRIM43Q96BQ3 446 aaPredicted RBP2.88□□□□□ -1.95
CHD9-218ENST00000566029 RNF31Q96EP0 1072 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 MOGAT1Q96PD6 335 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 MRM3Q9HC36 420 aaKnown RBP2.88□□□□□ -1.95
CHD9-218ENST00000566029 GLTPQ9NZD2 209 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 PAK5Q9P286 719 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 SLCO3A1Q9UIG8 710 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 SIGLEC1Q9BZZ2 1709 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 F8VP50 259 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 EI24O14681 340 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 NPC1O15118 1278 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 MED7O43513 233 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 NRP2O60462 931 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 H2AFYO75367 372 aaKnown RBP2.88□□□□□ -1.95
CHD9-218ENST00000566029 YES1P07947 543 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 ZNF10P21506 573 aaPredicted RBP2.88□□□□□ -1.95
CHD9-218ENST00000566029 EIF2S3P41091 472 aaKnown RBP2.88□□□□□ -1.95
CHD9-218ENST00000566029 SLC7A2P52569 658 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms