RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 GPR150Q8NGU9 434 aa13.52□□□□□ -0.25
HERPUD1-210ENST00000565966 ZFPM2Q8WW38 1151 aa13.52□□□□□ -0.25
HERPUD1-210ENST00000565966 CCDC74BQ96LY2 380 aa13.52□□□□□ -0.25
HERPUD1-210ENST00000565966 C12orf66Q96MD2 445 aa13.52□□□□□ -0.25
HERPUD1-210ENST00000565966 INSM2Q96T92 566 aaPredicted RBP13.52□□□□□ -0.25
HERPUD1-210ENST00000565966 GRHL1Q9NZI5 618 aa13.52□□□□□ -0.25
HERPUD1-210ENST00000565966 IL1RAPL1Q9NZN1 696 aa13.52□□□□□ -0.25
HERPUD1-210ENST00000565966 TMEM9Q9P0T7 183 aa13.52□□□□□ -0.25
HERPUD1-210ENST00000565966 WHRNQ9P202 907 aa13.52□□□□□ -0.25
HERPUD1-210ENST00000565966 FAM169AQ9Y6X4 670 aa13.52□□□□□ -0.25
HERPUD1-210ENST00000565966 ZZEF1O43149 2961 aa13.52□□□□□ -0.25
HERPUD1-210ENST00000565966 ZFHX4Q86UP3 3567 aa13.51□□□□□ -0.25
HERPUD1-210ENST00000565966 PKD1L2Q7Z442 2459 aa13.51□□□□□ -0.25
HERPUD1-210ENST00000565966 A0A087WV48 116 aa13.51□□□□□ -0.25
HERPUD1-210ENST00000565966 PMS2P1A4D2B8 440 aa13.51□□□□□ -0.25
HERPUD1-210ENST00000565966 PRMT5O14744 637 aaPredicted RBP13.51□□□□□ -0.25
HERPUD1-210ENST00000565966 NDC80O14777 642 aa13.51□□□□□ -0.25
HERPUD1-210ENST00000565966 RRP8O43159 456 aaKnown RBP13.51□□□□□ -0.25
HERPUD1-210ENST00000565966 NDUFS3O75489 264 aa13.51□□□□□ -0.25
HERPUD1-210ENST00000565966 FTH1P02794 183 aa13.51□□□□□ -0.25
HERPUD1-210ENST00000565966 SLC35G4P0C7Q5 338 aa13.51□□□□□ -0.25
HERPUD1-210ENST00000565966 OR56A5P0C7T3 313 aa13.51□□□□□ -0.25
HERPUD1-210ENST00000565966 MTHFD1P11586 935 aaKnown RBP13.51□□□□□ -0.25
HERPUD1-210ENST00000565966 HGFP14210 728 aa13.51□□□□□ -0.25
HERPUD1-210ENST00000565966 MPSTP25325 297 aa13.51□□□□□ -0.25
HERPUD1-210ENST00000565966 CSTF2P33240 577 aaKnown RBP eCLIP13.51□□□□□ -0.25
HERPUD1-210ENST00000565966 ARL4CP56559 192 aa13.51□□□□□ -0.25
HERPUD1-210ENST00000565966 PCBP4P57723 403 aaKnown RBP13.51□□□□□ -0.25
HERPUD1-210ENST00000565966 CALCOCO2Q13137 446 aa13.51□□□□□ -0.25
HERPUD1-210ENST00000565966 RPA4Q13156 261 aa13.51□□□□□ -0.25
HERPUD1-210ENST00000565966 HIF1AQ16665 826 aa13.51□□□□□ -0.25
HERPUD1-210ENST00000565966 LONRF1Q17RB8 773 aa13.51□□□□□ -0.25
HERPUD1-210ENST00000565966 TYSND1Q2T9J0 566 aa13.51□□□□□ -0.25
HERPUD1-210ENST00000565966 CAPRIN2Q6IMN6 1127 aaKnown RBP13.51□□□□□ -0.25
HERPUD1-210ENST00000565966 NEPROQ6NW34 567 aa13.51□□□□□ -0.25
HERPUD1-210ENST00000565966 LRRC69Q6ZNQ3 347 aa13.51□□□□□ -0.25
HERPUD1-210ENST00000565966 SDCCAG8Q86SQ7 713 aaPredicted RBP13.51□□□□□ -0.25
HERPUD1-210ENST00000565966 CLEC14AQ86T13 490 aa13.51□□□□□ -0.25
HERPUD1-210ENST00000565966 OTUD6BQ8N6M0 293 aa13.51□□□□□ -0.25
HERPUD1-210ENST00000565966 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.51□□□□□ -0.25
HERPUD1-210ENST00000565966 ZNF248Q8NDW4 579 aa13.51□□□□□ -0.25
HERPUD1-210ENST00000565966 DCBLD2Q96PD2 775 aa13.51□□□□□ -0.25
HERPUD1-210ENST00000565966 WDR83Q9BRX9 315 aaKnown RBP13.51□□□□□ -0.25
HERPUD1-210ENST00000565966 NAT9Q9BTE0 207 aa13.51□□□□□ -0.25
HERPUD1-210ENST00000565966 LRRC1Q9BTT6 524 aa13.51□□□□□ -0.25
HERPUD1-210ENST00000565966 P2RY12Q9H244 342 aa13.51□□□□□ -0.25
HERPUD1-210ENST00000565966 COG4Q9H9E3 785 aa13.51□□□□□ -0.25
HERPUD1-210ENST00000565966 IMP3Q9NV31 184 aaKnown RBP13.51□□□□□ -0.25
HERPUD1-210ENST00000565966 PISDQ9UG56 409 aa13.51□□□□□ -0.25
HERPUD1-210ENST00000565966 UTP11Q9Y3A2 253 aaKnown RBP13.51□□□□□ -0.25
HERPUD1-210ENST00000565966 HEBP2Q9Y5Z4 205 aa13.51□□□□□ -0.25
HERPUD1-210ENST00000565966 CFAP20Q9Y6A4 193 aaKnown RBP13.51□□□□□ -0.25
HERPUD1-210ENST00000565966 COLEC10Q9Y6Z7 277 aa13.51□□□□□ -0.25
HERPUD1-210ENST00000565966 E7ESA3 106 aa13.5□□□□□ -0.25
HERPUD1-210ENST00000565966 AGRPO00253 132 aa13.5□□□□□ -0.25
HERPUD1-210ENST00000565966 LIN7AO14910 233 aaPredicted RBP13.5□□□□□ -0.25
HERPUD1-210ENST00000565966 TYRP1P17643 537 aa13.5□□□□□ -0.25
HERPUD1-210ENST00000565966 ITIH1P19827 911 aa13.5□□□□□ -0.25
HERPUD1-210ENST00000565966 OGNP20774 298 aaKnown RBP13.5□□□□□ -0.25
HERPUD1-210ENST00000565966 RPS3P23396 243 aaKnown RBP eCLIP13.5□□□□□ -0.257e-7■■□□□ 12.5
HERPUD1-210ENST00000565966 NDUFS1P28331 727 aa13.5□□□□□ -0.25
HERPUD1-210ENST00000565966 ELK3P41970 407 aa13.5□□□□□ -0.25
HERPUD1-210ENST00000565966 CD151P48509 253 aa13.5□□□□□ -0.25
HERPUD1-210ENST00000565966 CBLBQ13191 982 aa13.5□□□□□ -0.25
HERPUD1-210ENST00000565966 THOC5Q13769 683 aaKnown RBP13.5□□□□□ -0.25
HERPUD1-210ENST00000565966 CRYMQ14894 314 aa13.5□□□□□ -0.25
HERPUD1-210ENST00000565966 SNAP47Q5SQN1 464 aa13.5□□□□□ -0.25
HERPUD1-210ENST00000565966 HP1BP3Q5SSJ5 553 aaPredicted RBP13.5□□□□□ -0.25
HERPUD1-210ENST00000565966 C8orf74Q6P047 294 aa13.5□□□□□ -0.25
HERPUD1-210ENST00000565966 CENPUQ71F23 418 aa13.5□□□□□ -0.25
HERPUD1-210ENST00000565966 ARHGAP22Q7Z5H3 698 aa13.5□□□□□ -0.25
HERPUD1-210ENST00000565966 CILP2Q8IUL8 1156 aa13.5□□□□□ -0.25
HERPUD1-210ENST00000565966 UNC5BQ8IZJ1 945 aa13.5□□□□□ -0.25
HERPUD1-210ENST00000565966 MMGT1Q8N4V1 131 aa13.5□□□□□ -0.25
HERPUD1-210ENST00000565966 AGBL5Q8NDL9 886 aa13.5□□□□□ -0.25
HERPUD1-210ENST00000565966 MNS1Q8NEH6 495 aa13.5□□□□□ -0.25
HERPUD1-210ENST00000565966 SPDYE1Q8NFV5 336 aaPredicted RBP13.5□□□□□ -0.25
HERPUD1-210ENST00000565966 LKAAEAR1Q8TD35 194 aa13.5□□□□□ -0.25
HERPUD1-210ENST00000565966 LRRC39Q96DD0 335 aa13.5□□□□□ -0.25
HERPUD1-210ENST00000565966 TCF12Q99081 682 aa13.5□□□□□ -0.25
HERPUD1-210ENST00000565966 RAB17Q9H0T7 212 aa13.5□□□□□ -0.25
HERPUD1-210ENST00000565966 OR52A5Q9H2C5 316 aa13.5□□□□□ -0.25
HERPUD1-210ENST00000565966 PLAC1Q9HBJ0 212 aa13.5□□□□□ -0.25
HERPUD1-210ENST00000565966 C20orf96Q9NUD7 363 aaPredicted RBP13.5□□□□□ -0.25
HERPUD1-210ENST00000565966 OGFRQ9NZT2 677 aa13.5□□□□□ -0.25
HERPUD1-210ENST00000565966 CHMP2BQ9UQN3 213 aa13.5□□□□□ -0.25
HERPUD1-210ENST00000565966 PCDHGA7Q9Y5G6 932 aa13.5□□□□□ -0.25
HERPUD1-210ENST00000565966 TEX264Q9Y6I9 313 aa13.5□□□□□ -0.25
HERPUD1-210ENST00000565966 DSPP15924 2871 aaKnown RBP13.5□□□□□ -0.25
HERPUD1-210ENST00000565966 SDK2Q58EX2 2172 aa13.49□□□□□ -0.25
HERPUD1-210ENST00000565966 PCM1Q15154 2024 aa13.49□□□□□ -0.25
HERPUD1-210ENST00000565966 MN1Q10571 1320 aaPredicted RBP13.49□□□□□ -0.25
HERPUD1-210ENST00000565966 CTAGE15A4D2H0 777 aa13.49□□□□□ -0.25
HERPUD1-210ENST00000565966 IQCF5A8MTL0 148 aa13.49□□□□□ -0.25
HERPUD1-210ENST00000565966 A8MU76 341 aa13.49□□□□□ -0.25
HERPUD1-210ENST00000565966 IFRD1O00458 451 aaPredicted RBP13.49□□□□□ -0.25
HERPUD1-210ENST00000565966 NVLO15381 856 aaKnown RBP13.49□□□□□ -0.25
HERPUD1-210ENST00000565966 CAPN5O15484 640 aaPredicted RBP13.49□□□□□ -0.25
HERPUD1-210ENST00000565966 TTC4O95801 387 aa13.49□□□□□ -0.25
HERPUD1-210ENST00000565966 C9P02748 559 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms