RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 PPP1R3AQ16821 1122 aa18.36■□□□□ 0.53
COMMD4-213ENST00000565834 FBXO39Q8N4B4 442 aa18.36■□□□□ 0.53
COMMD4-213ENST00000565834 OR13H1Q8NG92 308 aa18.36■□□□□ 0.53
COMMD4-213ENST00000565834 SCARF2Q96GP6 870 aaPredicted RBP18.36■□□□□ 0.53
COMMD4-213ENST00000565834 FAM107BQ9H098 131 aa18.36■□□□□ 0.53
COMMD4-213ENST00000565834 SLCO1B3Q9NPD5 702 aa18.36■□□□□ 0.53
COMMD4-213ENST00000565834 MRPL40Q9NQ50 206 aaKnown RBP18.36■□□□□ 0.53
COMMD4-213ENST00000565834 TM7SF3Q9NS93 570 aa18.36■□□□□ 0.53
COMMD4-213ENST00000565834 UTP6Q9NYH9 597 aaKnown RBP18.36■□□□□ 0.53
COMMD4-213ENST00000565834 NUDT4Q9NZJ9 180 aa18.36■□□□□ 0.53
COMMD4-213ENST00000565834 NCKIPSDQ9NZQ3 722 aa18.36■□□□□ 0.53
COMMD4-213ENST00000565834 CD274Q9NZQ7 290 aa18.36■□□□□ 0.53
COMMD4-213ENST00000565834 SLC23A2Q9UGH3 650 aa18.36■□□□□ 0.53
COMMD4-213ENST00000565834 DNAJC16Q9Y2G8 782 aa18.36■□□□□ 0.53
COMMD4-213ENST00000565834 OARD1Q9Y530 152 aa18.36■□□□□ 0.53
COMMD4-213ENST00000565834 NCF1BA6NI72 391 aaPredicted RBP18.35■□□□□ 0.53
COMMD4-213ENST00000565834 NCF1CA8MVU1 366 aaPredicted RBP18.35■□□□□ 0.53
COMMD4-213ENST00000565834 SNX2O60749 519 aa18.35■□□□□ 0.53
COMMD4-213ENST00000565834 SLC34A2O95436 690 aa18.35■□□□□ 0.53
COMMD4-213ENST00000565834 NCF1P14598 390 aaPredicted RBP18.35■□□□□ 0.53
COMMD4-213ENST00000565834 VCLP18206 1134 aa18.35■□□□□ 0.53
COMMD4-213ENST00000565834 BCKDHBP21953 392 aa18.35■□□□□ 0.53
COMMD4-213ENST00000565834 PDHA2P29803 388 aa18.35■□□□□ 0.53
COMMD4-213ENST00000565834 GNPDA1P46926 289 aa18.35■□□□□ 0.53
COMMD4-213ENST00000565834 NAGLUP54802 743 aa18.35■□□□□ 0.53
COMMD4-213ENST00000565834 GABPB1Q06547 395 aaPredicted RBP18.35■□□□□ 0.53
COMMD4-213ENST00000565834 RPA4Q13156 261 aa18.35■□□□□ 0.53
COMMD4-213ENST00000565834 PFKFB4Q16877 469 aa18.35■□□□□ 0.53
COMMD4-213ENST00000565834 PYCR3Q53H96 274 aa18.35■□□□□ 0.53
COMMD4-213ENST00000565834 TPRG1LQ5T0D9 272 aa18.35■□□□□ 0.53
COMMD4-213ENST00000565834 CES4AQ5XG92 561 aa18.35■□□□□ 0.53
COMMD4-213ENST00000565834 UBE2R2Q712K3 238 aaPredicted RBP18.35■□□□□ 0.53
COMMD4-213ENST00000565834 CHST15Q7LFX5 561 aaPredicted RBP18.35■□□□□ 0.53
COMMD4-213ENST00000565834 RAB44Q7Z6P3 723 aaPredicted RBP18.35■□□□□ 0.53
COMMD4-213ENST00000565834 PTGR2Q8N8N7 351 aaPredicted RBP18.35■□□□□ 0.53
COMMD4-213ENST00000565834 OR6Y1Q8NGX8 325 aa18.35■□□□□ 0.53
COMMD4-213ENST00000565834 FAM174AQ8TBP5 190 aa18.35■□□□□ 0.53
COMMD4-213ENST00000565834 ASB11Q8WXH4 323 aa18.35■□□□□ 0.53
COMMD4-213ENST00000565834 TIMM29Q9BSF4 260 aa18.35■□□□□ 0.53
COMMD4-213ENST00000565834 GATA5Q9BWX5 397 aaPredicted RBP18.35■□□□□ 0.53
COMMD4-213ENST00000565834 NSRP1Q9H0G5 558 aaKnown RBP18.35■□□□□ 0.53
COMMD4-213ENST00000565834 DPEP2Q9H4A9 486 aa18.35■□□□□ 0.53
COMMD4-213ENST00000565834 RABEP2Q9H5N1 569 aa18.35■□□□□ 0.53
COMMD4-213ENST00000565834 CARS2Q9HA77 564 aaKnown RBP18.35■□□□□ 0.53
COMMD4-213ENST00000565834 AASDHPPTQ9NRN7 309 aa18.35■□□□□ 0.53
COMMD4-213ENST00000565834 FGFR1OP2Q9NVK5 253 aa18.35■□□□□ 0.53
COMMD4-213ENST00000565834 KLQ9UEF7 1012 aa18.35■□□□□ 0.53
COMMD4-213ENST00000565834 LRP4O75096 1905 aa18.35■□□□□ 0.53
COMMD4-213ENST00000565834 TNFRSF10CO14798 259 aa18.34■□□□□ 0.53
COMMD4-213ENST00000565834 SLC16A5O15375 505 aa18.34■□□□□ 0.53
COMMD4-213ENST00000565834 MATN4O95460 622 aa18.34■□□□□ 0.53
COMMD4-213ENST00000565834 S100BP04271 92 aaPredicted RBP18.34■□□□□ 0.53
COMMD4-213ENST00000565834 ENO2P09104 434 aaPredicted RBP18.34■□□□□ 0.53
COMMD4-213ENST00000565834 ACP5P13686 325 aa18.34■□□□□ 0.53
COMMD4-213ENST00000565834 MAPK9P45984 424 aa18.34■□□□□ 0.53
COMMD4-213ENST00000565834 FNTBP49356 437 aa18.34■□□□□ 0.53
COMMD4-213ENST00000565834 HK3P52790 923 aa18.34■□□□□ 0.53
COMMD4-213ENST00000565834 ABRQ12979 859 aa18.34■□□□□ 0.53
COMMD4-213ENST00000565834 PHKG1Q16816 387 aa18.34■□□□□ 0.53
COMMD4-213ENST00000565834 XKR5Q6UX68 686 aa18.34■□□□□ 0.53
COMMD4-213ENST00000565834 FAM83HQ6ZRV2 1179 aaPredicted RBP18.34■□□□□ 0.53
COMMD4-213ENST00000565834 CPLX4Q7Z7G2 160 aa18.34■□□□□ 0.53
COMMD4-213ENST00000565834 CCNYL1Q8N7R7 359 aa18.34■□□□□ 0.53
COMMD4-213ENST00000565834 OR1E3Q8WZA6 343 aa18.34■□□□□ 0.53
COMMD4-213ENST00000565834 DLG3Q92796 817 aa18.34■□□□□ 0.53
COMMD4-213ENST00000565834 PDXPQ96GD0 296 aa18.34■□□□□ 0.53
COMMD4-213ENST00000565834 HSPA12BQ96MM6 686 aa18.34■□□□□ 0.53
COMMD4-213ENST00000565834 SLC6A18Q96N87 628 aa18.34■□□□□ 0.53
COMMD4-213ENST00000565834 FOPNLQ96NB1 174 aa18.34■□□□□ 0.53
COMMD4-213ENST00000565834 OR2M4Q96R27 311 aa18.34■□□□□ 0.53
COMMD4-213ENST00000565834 SLC12A9Q9BXP2 914 aa18.34■□□□□ 0.53
COMMD4-213ENST00000565834 PITPNM3Q9BZ71 974 aa18.34■□□□□ 0.53
COMMD4-213ENST00000565834 RDH14Q9HBH5 336 aa18.34■□□□□ 0.53
COMMD4-213ENST00000565834 THAP1Q9NVV9 213 aa18.34■□□□□ 0.53
COMMD4-213ENST00000565834 EIF2B4Q9UI10 523 aaKnown RBP18.34■□□□□ 0.53
COMMD4-213ENST00000565834 GPSM3Q9Y4H4 160 aa18.34■□□□□ 0.53
COMMD4-213ENST00000565834 TTC28Q96AY4 2481 aa18.34■□□□□ 0.53
COMMD4-213ENST00000565834 THADAQ6YHU6 1953 aa18.34■□□□□ 0.53
COMMD4-213ENST00000565834 PABPN1LA6NDY0 278 aaKnown RBP18.34■□□□□ 0.53
COMMD4-213ENST00000565834 TMEM114B3SHH9 223 aa18.34■□□□□ 0.53
COMMD4-213ENST00000565834 GFYI3L273 518 aa18.34■□□□□ 0.53
COMMD4-213ENST00000565834 FFAR2O15552 330 aa18.34■□□□□ 0.53
COMMD4-213ENST00000565834 KLK8O60259 260 aa18.34■□□□□ 0.53
COMMD4-213ENST00000565834 EDF1O60869 148 aaKnown RBP18.34■□□□□ 0.53
COMMD4-213ENST00000565834 KCNJ13O60928 360 aa18.34■□□□□ 0.53
COMMD4-213ENST00000565834 SNNO75324 88 aaPredicted RBP18.34■□□□□ 0.53
COMMD4-213ENST00000565834 THEGLP0DJG4 465 aa18.34■□□□□ 0.53
COMMD4-213ENST00000565834 CYP2A7P20853 494 aa18.34■□□□□ 0.53
COMMD4-213ENST00000565834 DRD4P21917 467 aa18.34■□□□□ 0.53
COMMD4-213ENST00000565834 SLC1A6P48664 564 aa18.34■□□□□ 0.53
COMMD4-213ENST00000565834 DMPKQ09013 629 aa18.34■□□□□ 0.53
COMMD4-213ENST00000565834 PTK2BQ14289 1009 aa18.34■□□□□ 0.53
COMMD4-213ENST00000565834 CFAP157Q5JU67 520 aa18.34■□□□□ 0.53
COMMD4-213ENST00000565834 WDR5BQ86VZ2 330 aa18.34■□□□□ 0.53
COMMD4-213ENST00000565834 CFAP61Q8NHU2 1237 aa18.34■□□□□ 0.53
COMMD4-213ENST00000565834 TMEM237Q96Q45 408 aa18.34■□□□□ 0.53
COMMD4-213ENST00000565834 TRIM54Q9BYV2 358 aa18.34■□□□□ 0.53
COMMD4-213ENST00000565834 PARVBQ9HBI1 364 aa18.34■□□□□ 0.53
COMMD4-213ENST00000565834 KLC4Q9NSK0 619 aa18.34■□□□□ 0.53
COMMD4-213ENST00000565834 TDGF1P13385 188 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms