RNA–Protein interactions for RNA: ENST00000565634.5

UBFD1-204, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 724 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-204ENST00000565634 GALNT3Q14435 633 aa6.1□□□□□ -1.43
UBFD1-204ENST00000565634 CST6Q15828 149 aa6.1□□□□□ -1.43
UBFD1-204ENST00000565634 FAM209AQ5JX71 171 aa6.1□□□□□ -1.43
UBFD1-204ENST00000565634 FNBP1LQ5T0N5 605 aa6.1□□□□□ -1.43
UBFD1-204ENST00000565634 CERCAMQ5T4B2 595 aa6.1□□□□□ -1.43
UBFD1-204ENST00000565634 ATP1A1-AS1Q5TC04 95 aa6.1□□□□□ -1.43
UBFD1-204ENST00000565634 DENND2CQ68D51 928 aa6.1□□□□□ -1.43
UBFD1-204ENST00000565634 NAPEPLDQ6IQ20 393 aa6.1□□□□□ -1.43
UBFD1-204ENST00000565634 BORAQ6PGQ7 559 aa6.1□□□□□ -1.43
UBFD1-204ENST00000565634 GDPD4Q6W3E5 623 aa6.1□□□□□ -1.43
UBFD1-204ENST00000565634 ZNF534Q76KX8 674 aa6.1□□□□□ -1.43
UBFD1-204ENST00000565634 PARS2Q7L3T8 475 aaKnown RBP6.1□□□□□ -1.43
UBFD1-204ENST00000565634 RAB11FIP2Q7L804 512 aa6.1□□□□□ -1.43
UBFD1-204ENST00000565634 NLRC3Q7RTR2 1065 aa6.1□□□□□ -1.43
UBFD1-204ENST00000565634 GSTA5Q7RTV2 222 aa6.1□□□□□ -1.43
UBFD1-204ENST00000565634 MAMDC2Q7Z304 686 aaPredicted RBP6.1□□□□□ -1.43
UBFD1-204ENST00000565634 ATG4DQ86TL0 474 aaPredicted RBP6.1□□□□□ -1.43
UBFD1-204ENST00000565634 TSPAN33Q86UF1 283 aa6.1□□□□□ -1.43
UBFD1-204ENST00000565634 LRRC49Q8IUZ0 686 aa6.1□□□□□ -1.43
UBFD1-204ENST00000565634 CDKL3Q8IVW4 592 aaPredicted RBP6.1□□□□□ -1.43
UBFD1-204ENST00000565634 MPP5Q8N3R9 675 aa6.1□□□□□ -1.43
UBFD1-204ENST00000565634 MMGT1Q8N4V1 131 aa6.1□□□□□ -1.43
UBFD1-204ENST00000565634 PCDH20Q8N6Y1 951 aaKnown RBP6.1□□□□□ -1.43
UBFD1-204ENST00000565634 MFSD2AQ8NA29 543 aa6.1□□□□□ -1.43
UBFD1-204ENST00000565634 OR2T34Q8NGX1 318 aa6.1□□□□□ -1.43
UBFD1-204ENST00000565634 C9orf43Q8TAL5 461 aaPredicted RBP6.1□□□□□ -1.43
UBFD1-204ENST00000565634 UBE2Q2Q8WVN8 375 aa6.1□□□□□ -1.43
UBFD1-204ENST00000565634 CASKIN2Q8WXE0 1202 aa6.1□□□□□ -1.43
UBFD1-204ENST00000565634 CPT1BQ92523 772 aa6.1□□□□□ -1.43
UBFD1-204ENST00000565634 FATE1Q969F0 183 aa6.1□□□□□ -1.43
UBFD1-204ENST00000565634 CCDC114Q96M63 670 aa6.1□□□□□ -1.43
UBFD1-204ENST00000565634 FCRL5Q96RD9 977 aa6.1□□□□□ -1.43
UBFD1-204ENST00000565634 HEPHQ9BQS7 1158 aa6.1□□□□□ -1.43
UBFD1-204ENST00000565634 DUSP23Q9BVJ7 150 aa6.1□□□□□ -1.43
UBFD1-204ENST00000565634 CINPQ9BW66 212 aaPredicted RBP6.1□□□□□ -1.43
UBFD1-204ENST00000565634 KRTAP4-9Q9BYQ8 210 aa6.1□□□□□ -1.43
UBFD1-204ENST00000565634 CPEB1Q9BZB8 566 aaKnown RBP6.1□□□□□ -1.43
UBFD1-204ENST00000565634 UNKQ9C0B0 810 aaKnown RBP6.1□□□□□ -1.43
UBFD1-204ENST00000565634 SLC25A51Q9H1U9 297 aa6.1□□□□□ -1.43
UBFD1-204ENST00000565634 DPH5Q9H2P9 285 aa6.1□□□□□ -1.43
UBFD1-204ENST00000565634 PLAC1Q9HBJ0 212 aa6.1□□□□□ -1.43
UBFD1-204ENST00000565634 DNAJC28Q9NX36 388 aa6.1□□□□□ -1.43
UBFD1-204ENST00000565634 GRHL1Q9NZI5 618 aa6.1□□□□□ -1.43
UBFD1-204ENST00000565634 KLHL8Q9P2G9 620 aaPredicted RBP6.1□□□□□ -1.43
UBFD1-204ENST00000565634 SUN2Q9UH99 717 aa6.1□□□□□ -1.43
UBFD1-204ENST00000565634 IL36AQ9UHA7 158 aa6.1□□□□□ -1.43
UBFD1-204ENST00000565634 VPS4AQ9UN37 437 aa6.1□□□□□ -1.43
UBFD1-204ENST00000565634 PRRC2CQ9Y520 2896 aaKnown RBP6.09□□□□□ -1.43
UBFD1-204ENST00000565634 LOC285095A0A1B0GVY8 99 aa6.09□□□□□ -1.43
UBFD1-204ENST00000565634 CCDC78A2IDD5 438 aa6.09□□□□□ -1.43
UBFD1-204ENST00000565634 KPNA3O00505 521 aaPredicted RBP6.09□□□□□ -1.43
UBFD1-204ENST00000565634 CCL22O00626 93 aa6.09□□□□□ -1.43
UBFD1-204ENST00000565634 SCAMP1O15126 338 aa6.09□□□□□ -1.43
UBFD1-204ENST00000565634 HTRA2O43464 458 aaPredicted RBP6.09□□□□□ -1.43
UBFD1-204ENST00000565634 RNGTTO60942 597 aaKnown RBP6.09□□□□□ -1.43
UBFD1-204ENST00000565634 TMEM63AO94886 807 aa6.09□□□□□ -1.43
UBFD1-204ENST00000565634 ITGA2BP08514 1039 aa6.09□□□□□ -1.43
UBFD1-204ENST00000565634 RHOXF2BP0C7M4 288 aa6.09□□□□□ -1.43
UBFD1-204ENST00000565634 LIPCP11150 499 aa6.09□□□□□ -1.43
UBFD1-204ENST00000565634 STIP1P31948 543 aaKnown RBP6.09□□□□□ -1.43
UBFD1-204ENST00000565634 CSNK1DP48730 415 aa6.09□□□□□ -1.43
UBFD1-204ENST00000565634 SNRPD1P62314 119 aaKnown RBP6.09□□□□□ -1.43
UBFD1-204ENST00000565634 CCL7P80098 99 aa6.09□□□□□ -1.43
UBFD1-204ENST00000565634 DR1Q01658 176 aa6.09□□□□□ -1.43
UBFD1-204ENST00000565634 ZNF235Q14590 738 aa6.09□□□□□ -1.43
UBFD1-204ENST00000565634 EIF4HQ15056 248 aaKnown RBP6.09□□□□□ -1.43
UBFD1-204ENST00000565634 WHAMMP3Q1A5X7 153 aa6.09□□□□□ -1.43
UBFD1-204ENST00000565634 PARP6Q2NL67 630 aa6.09□□□□□ -1.43
UBFD1-204ENST00000565634 P3H1Q32P28 736 aa6.09□□□□□ -1.43
UBFD1-204ENST00000565634 CCDC38Q502W7 563 aa6.09□□□□□ -1.43
UBFD1-204ENST00000565634 SIRPB2Q5JXA9 342 aa6.09□□□□□ -1.43
UBFD1-204ENST00000565634 DNTTIP2Q5QJE6 756 aaKnown RBP6.09□□□□□ -1.43
UBFD1-204ENST00000565634 PIP5KL1Q5T9C9 394 aa6.09□□□□□ -1.43
UBFD1-204ENST00000565634 DUPD1Q68J44 220 aa6.09□□□□□ -1.43
UBFD1-204ENST00000565634 CES3Q6UWW8 571 aa6.09□□□□□ -1.43
UBFD1-204ENST00000565634 ZDHHC24Q6UX98 284 aa6.09□□□□□ -1.43
UBFD1-204ENST00000565634 RANBP10Q6VN20 620 aa6.09□□□□□ -1.43
UBFD1-204ENST00000565634 BZW1Q7L1Q6 419 aaKnown RBP6.09□□□□□ -1.43
UBFD1-204ENST00000565634 CAND1Q86VP6 1230 aaKnown RBP6.09□□□□□ -1.43
UBFD1-204ENST00000565634 KLHDC8BQ8IXV7 354 aa6.09□□□□□ -1.43
UBFD1-204ENST00000565634 CBARPQ8N350 705 aaPredicted RBP6.09□□□□□ -1.43
UBFD1-204ENST00000565634 KDM1BQ8NB78 822 aa6.09□□□□□ -1.43
UBFD1-204ENST00000565634 TMIEQ8NEW7 156 aa6.09□□□□□ -1.43
UBFD1-204ENST00000565634 IPMKQ8NFU5 416 aa6.09□□□□□ -1.43
UBFD1-204ENST00000565634 OR52K1Q8NGK4 314 aa6.09□□□□□ -1.43
UBFD1-204ENST00000565634 NAT14Q8WUY8 206 aa6.09□□□□□ -1.43
UBFD1-204ENST00000565634 ZBTB9Q96C00 473 aa6.09□□□□□ -1.43
UBFD1-204ENST00000565634 TCTN2Q96GX1 697 aa6.09□□□□□ -1.43
UBFD1-204ENST00000565634 ZNF778Q96MU6 729 aa6.09□□□□□ -1.43
UBFD1-204ENST00000565634 RHOXF2Q9BQY4 288 aa6.09□□□□□ -1.43
UBFD1-204ENST00000565634 WDR83Q9BRX9 315 aaKnown RBP6.09□□□□□ -1.43
UBFD1-204ENST00000565634 FICDQ9BVA6 458 aa6.09□□□□□ -1.43
UBFD1-204ENST00000565634 GBA3Q9H227 469 aa6.09□□□□□ -1.43
UBFD1-204ENST00000565634 TCEAL2Q9H3H9 227 aaPredicted RBP6.09□□□□□ -1.43
UBFD1-204ENST00000565634 RSPH14Q9UHP6 348 aa6.09□□□□□ -1.43
UBFD1-204ENST00000565634 TRHDEQ9UKU6 1024 aa6.09□□□□□ -1.43
UBFD1-204ENST00000565634 ZFR2Q9UPR6 939 aaKnown RBP6.09□□□□□ -1.43
UBFD1-204ENST00000565634 TP53TG5Q9Y2B4 290 aa6.09□□□□□ -1.43
UBFD1-204ENST00000565634 COQ6Q9Y2Z9 468 aa6.09□□□□□ -1.43
UBFD1-204ENST00000565634 NF1P21359 2839 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms