RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 PPP2R2BQ00005 443 aa20.18■□□□□ 0.82
MAP1LC3B-206ENST00000564844 BCL2A1Q16548 175 aa20.18■□□□□ 0.82
MAP1LC3B-206ENST00000564844 RAB41Q5JT25 222 aa20.18■□□□□ 0.82
MAP1LC3B-206ENST00000564844 SPATA19Q7Z5L4 167 aa20.18■□□□□ 0.82
MAP1LC3B-206ENST00000564844 OR6Q1Q8NGQ2 317 aa20.18■□□□□ 0.82
MAP1LC3B-206ENST00000564844 PYCR2Q96C36 320 aa20.18■□□□□ 0.82
MAP1LC3B-206ENST00000564844 IL37Q9NZH6 218 aa20.18■□□□□ 0.82
MAP1LC3B-206ENST00000564844 DNAJB9Q9UBS3 223 aa20.18■□□□□ 0.82
MAP1LC3B-206ENST00000564844 A0A0G2JMZ2 1700 aa20.17■□□□□ 0.82
MAP1LC3B-206ENST00000564844 LRRC37A2A6NM11 1700 aa20.17■□□□□ 0.82
MAP1LC3B-206ENST00000564844 MKI67P46013 3256 aaKnown RBP20.17■□□□□ 0.82
MAP1LC3B-206ENST00000564844 LOC100506127A0A0U1RQW1 187 aa20.17■□□□□ 0.82
MAP1LC3B-206ENST00000564844 SERPINA1P01009 418 aa20.17■□□□□ 0.82
MAP1LC3B-206ENST00000564844 MMP3P08254 477 aa20.17■□□□□ 0.82
MAP1LC3B-206ENST00000564844 ACVRL1P37023 503 aa20.17■□□□□ 0.82
MAP1LC3B-206ENST00000564844 TIGD7Q6NT04 549 aaPredicted RBP20.17■□□□□ 0.82
MAP1LC3B-206ENST00000564844 AKAP14Q86UN6 197 aa20.17■□□□□ 0.82
MAP1LC3B-206ENST00000564844 ZFAND4Q86XD8 727 aa20.17■□□□□ 0.82
MAP1LC3B-206ENST00000564844 GOLM1Q8NBJ4 401 aa20.17■□□□□ 0.82
MAP1LC3B-206ENST00000564844 LGALS12Q96DT0 336 aa20.17■□□□□ 0.82
MAP1LC3B-206ENST00000564844 ZHX1-C8orf76Q96EF9 292 aa20.17■□□□□ 0.82
MAP1LC3B-206ENST00000564844 ERVK-11Q9UQG0 969 aa20.17■□□□□ 0.82
MAP1LC3B-206ENST00000564844 BOLA1Q9Y3E2 137 aa20.17■□□□□ 0.82
MAP1LC3B-206ENST00000564844 hCG_2039718K7EN88 272 aa20.17■□□□□ 0.82
MAP1LC3B-206ENST00000564844 TLR5O60602 858 aa20.17■□□□□ 0.82
MAP1LC3B-206ENST00000564844 NDUFS3O75489 264 aa20.17■□□□□ 0.82
MAP1LC3B-206ENST00000564844 WISP3O95389 354 aaPredicted RBP20.17■□□□□ 0.82
MAP1LC3B-206ENST00000564844 ALOX12P18054 663 aa20.17■□□□□ 0.82
MAP1LC3B-206ENST00000564844 CD6P30203 668 aa20.17■□□□□ 0.82
MAP1LC3B-206ENST00000564844 NFKB2Q00653 900 aa20.17■□□□□ 0.82
MAP1LC3B-206ENST00000564844 HIST2H2ACQ16777 129 aaPredicted RBP20.17■□□□□ 0.82
MAP1LC3B-206ENST00000564844 SETMARQ53H47 684 aaPredicted RBP20.17■□□□□ 0.82
MAP1LC3B-206ENST00000564844 PIK3R6Q5UE93 754 aa20.17■□□□□ 0.82
MAP1LC3B-206ENST00000564844 B3GNT8Q7Z7M8 397 aa20.17■□□□□ 0.82
MAP1LC3B-206ENST00000564844 DCP2Q8IU60 420 aaKnown RBP20.17■□□□□ 0.82
MAP1LC3B-206ENST00000564844 ARMC8Q8IUR7 673 aa20.17■□□□□ 0.82
MAP1LC3B-206ENST00000564844 RTL3Q8N8U3 475 aaKnown RBP20.17■□□□□ 0.82
MAP1LC3B-206ENST00000564844 OR4K2Q8NGD2 314 aa20.17■□□□□ 0.82
MAP1LC3B-206ENST00000564844 PCDHGA10Q9Y5H3 936 aa20.17■□□□□ 0.82
MAP1LC3B-206ENST00000564844 SSX4O60224 188 aa20.16■□□□□ 0.82
MAP1LC3B-206ENST00000564844 UROSP10746 265 aa20.16■□□□□ 0.82
MAP1LC3B-206ENST00000564844 CYP4F2P78329 520 aa20.16■□□□□ 0.82
MAP1LC3B-206ENST00000564844 CYP4F3Q08477 520 aa20.16■□□□□ 0.82
MAP1LC3B-206ENST00000564844 CLCA4Q14CN2 919 aa20.16■□□□□ 0.82
MAP1LC3B-206ENST00000564844 ABRAXAS2Q15018 415 aa20.16■□□□□ 0.82
MAP1LC3B-206ENST00000564844 SPANXN4Q5MJ08 99 aa20.16■□□□□ 0.82
MAP1LC3B-206ENST00000564844 Q6ZPB1 254 aaPredicted RBP20.16■□□□□ 0.82
MAP1LC3B-206ENST00000564844 BEND5Q7L4P6 421 aa20.16■□□□□ 0.82
MAP1LC3B-206ENST00000564844 GATAD2AQ86YP4 633 aa20.16■□□□□ 0.82
MAP1LC3B-206ENST00000564844 NETO1Q8TDF5 533 aa20.16■□□□□ 0.82
MAP1LC3B-206ENST00000564844 ZNF641Q96N77 438 aaPredicted RBP20.16■□□□□ 0.82
MAP1LC3B-206ENST00000564844 MAGEE1Q9HCI5 957 aa20.16■□□□□ 0.82
MAP1LC3B-206ENST00000564844 VTA1Q9NP79 307 aa20.16■□□□□ 0.82
MAP1LC3B-206ENST00000564844 SMPD4Q9NXE4 827 aa20.16■□□□□ 0.82
MAP1LC3B-206ENST00000564844 PCTPQ9UKL6 214 aa20.16■□□□□ 0.82
MAP1LC3B-206ENST00000564844 KERAO60938 352 aa20.16■□□□□ 0.82
MAP1LC3B-206ENST00000564844 RECQL5O94762 991 aaPredicted RBP20.16■□□□□ 0.82
MAP1LC3B-206ENST00000564844 PEX11BO96011 259 aa20.16■□□□□ 0.82
MAP1LC3B-206ENST00000564844 CD36P16671 472 aa20.16■□□□□ 0.82
MAP1LC3B-206ENST00000564844 ALDH7A1P49419 539 aaKnown RBP20.16■□□□□ 0.82
MAP1LC3B-206ENST00000564844 RAD51Q06609 339 aa20.16■□□□□ 0.82
MAP1LC3B-206ENST00000564844 NECAB2Q7Z6G3 386 aa20.16■□□□□ 0.82
MAP1LC3B-206ENST00000564844 CYP4Z1Q86W10 505 aa20.16■□□□□ 0.82
MAP1LC3B-206ENST00000564844 EID3Q8N140 333 aa20.16■□□□□ 0.82
MAP1LC3B-206ENST00000564844 TTC30BQ8N4P2 665 aa20.16■□□□□ 0.82
MAP1LC3B-206ENST00000564844 EFHBQ8N7U6 833 aa20.16■□□□□ 0.82
MAP1LC3B-206ENST00000564844 AARSD1Q9BTE6 412 aaKnown RBP20.16■□□□□ 0.82
MAP1LC3B-206ENST00000564844 UGT2B28Q9BY64 529 aa20.16■□□□□ 0.82
MAP1LC3B-206ENST00000564844 DSN1Q9H410 356 aa20.16■□□□□ 0.82
MAP1LC3B-206ENST00000564844 TAS2R13Q9NYV9 303 aa20.16■□□□□ 0.82
MAP1LC3B-206ENST00000564844 C3orf18Q9UK00 162 aa20.16■□□□□ 0.82
MAP1LC3B-206ENST00000564844 MED16Q9Y2X0 877 aa20.16■□□□□ 0.82
MAP1LC3B-206ENST00000564844 A0A1W2PQH9 124 aa20.16■□□□□ 0.82
MAP1LC3B-206ENST00000564844 MROH6A6NGR9 719 aa20.16■□□□□ 0.82
MAP1LC3B-206ENST00000564844 MOXD2PA6NHM9 499 aa20.16■□□□□ 0.82
MAP1LC3B-206ENST00000564844 CXCR6O00574 342 aa20.16■□□□□ 0.82
MAP1LC3B-206ENST00000564844 KCNK2O95069 426 aa20.16■□□□□ 0.82
MAP1LC3B-206ENST00000564844 MADCAM1Q13477 382 aa20.16■□□□□ 0.82
MAP1LC3B-206ENST00000564844 CBX2Q14781 532 aaPredicted RBP20.16■□□□□ 0.82
MAP1LC3B-206ENST00000564844 CFAP52Q8N1V2 620 aa20.16■□□□□ 0.82
MAP1LC3B-206ENST00000564844 KIAA1191Q96A73 305 aa20.16■□□□□ 0.82
MAP1LC3B-206ENST00000564844 LINGO1Q96FE5 620 aa20.16■□□□□ 0.82
MAP1LC3B-206ENST00000564844 ASB2Q96Q27 587 aa20.16■□□□□ 0.82
MAP1LC3B-206ENST00000564844 RBM4BQ9BQ04 359 aaKnown RBP20.16■□□□□ 0.82
MAP1LC3B-206ENST00000564844 RBM4Q9BWF3 364 aaKnown RBP20.16■□□□□ 0.82
MAP1LC3B-206ENST00000564844 PRM3Q9NNZ6 103 aa20.16■□□□□ 0.82
MAP1LC3B-206ENST00000564844 C8orf4Q9NR00 106 aa20.16■□□□□ 0.82
MAP1LC3B-206ENST00000564844 ORC6Q9Y5N6 252 aa20.16■□□□□ 0.82
MAP1LC3B-206ENST00000564844 TTC34A8MYJ7 566 aa20.15■□□□□ 0.82
MAP1LC3B-206ENST00000564844 UPK3BL1B0FP48 263 aa20.15■□□□□ 0.82
MAP1LC3B-206ENST00000564844 UPK3BL2E5RIL1 263 aa20.15■□□□□ 0.82
MAP1LC3B-206ENST00000564844 SCAMP3O14828 347 aaKnown RBP20.15■□□□□ 0.82
MAP1LC3B-206ENST00000564844 FAM20BO75063 409 aa20.15■□□□□ 0.82
MAP1LC3B-206ENST00000564844 TULP3O75386 442 aa20.15■□□□□ 0.82
MAP1LC3B-206ENST00000564844 ATXN1LP0C7T5 689 aaKnown RBP20.15■□□□□ 0.82
MAP1LC3B-206ENST00000564844 KCNE1P15382 129 aa20.15■□□□□ 0.82
MAP1LC3B-206ENST00000564844 IFITM2Q01629 132 aa20.15■□□□□ 0.82
MAP1LC3B-206ENST00000564844 ILF2Q12905 390 aaKnown RBP20.15■□□□□ 0.82
MAP1LC3B-206ENST00000564844 VARS2Q5ST30 1063 aaKnown RBP20.15■□□□□ 0.82
MAP1LC3B-206ENST00000564844 STEAP3Q658P3 488 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms