RNA–Protein interactions for RNA: ENST00000563945.1

HERC2-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-204ENST00000563945 SRMSQ9H3Y6 488 aa20.34■□□□□ 0.85
HERC2-204ENST00000563945 NHEJ1Q9H9Q4 299 aaPredicted RBP20.34■□□□□ 0.85
HERC2-204ENST00000563945 MLXIPLQ9NP71 852 aa20.34■□□□□ 0.85
HERC2-204ENST00000563945 CRLS1Q9UJA2 301 aa20.34■□□□□ 0.85
HERC2-204ENST00000563945 TCFL5Q9UL49 500 aa20.34■□□□□ 0.85
HERC2-204ENST00000563945 ICE1Q9Y2F5 2266 aa20.34■□□□□ 0.85
HERC2-204ENST00000563945 A6NL46 340 aa20.33■□□□□ 0.85
HERC2-204ENST00000563945 HACD1B0YJ81 288 aa20.33■□□□□ 0.85
HERC2-204ENST00000563945 CFAP99D6REC4 459 aa20.33■□□□□ 0.85
HERC2-204ENST00000563945 ZNF185O15231 689 aa20.33■□□□□ 0.85
HERC2-204ENST00000563945 ANXA9O76027 345 aa20.33■□□□□ 0.85
HERC2-204ENST00000563945 ZRANB2O95218 330 aaKnown RBP eCLIP20.33■□□□□ 0.85
HERC2-204ENST00000563945 PTPRCAPQ14761 206 aa20.33■□□□□ 0.85
HERC2-204ENST00000563945 INPP5JQ15735 1006 aaPredicted RBP20.33■□□□□ 0.85
HERC2-204ENST00000563945 PLEKHS1Q5SXH7 462 aa20.33■□□□□ 0.85
HERC2-204ENST00000563945 CCDC181Q5TID7 509 aa20.33■□□□□ 0.85
HERC2-204ENST00000563945 PAPD7Q5XG87 772 aaKnown RBP20.33■□□□□ 0.85
HERC2-204ENST00000563945 DSELQ8IZU8 1212 aa20.33■□□□□ 0.85
HERC2-204ENST00000563945 TMEM102Q8N9M5 508 aaPredicted RBP20.33■□□□□ 0.85
HERC2-204ENST00000563945 SLC38A9Q8NBW4 561 aa20.33■□□□□ 0.85
HERC2-204ENST00000563945 ACVR1CQ8NER5 493 aa20.33■□□□□ 0.85
HERC2-204ENST00000563945 HAUS1Q96CS2 278 aa20.33■□□□□ 0.85
HERC2-204ENST00000563945 FICDQ9BVA6 458 aa20.33■□□□□ 0.85
HERC2-204ENST00000563945 MFRPQ9BY79 579 aa20.33■□□□□ 0.85
HERC2-204ENST00000563945 ACTR5Q9H9F9 607 aaPredicted RBP20.33■□□□□ 0.85
HERC2-204ENST00000563945 ARL5AQ9Y689 179 aa20.33■□□□□ 0.85
HERC2-204ENST00000563945 ESPL1Q14674 2120 aa20.33■□□□□ 0.84
HERC2-204ENST00000563945 C5orf60A6NFR6 353 aa20.32■□□□□ 0.84
HERC2-204ENST00000563945 TMEM150CB9EJG8 249 aa20.32■□□□□ 0.84
HERC2-204ENST00000563945 C9J4A7 227 aa20.32■□□□□ 0.84
HERC2-204ENST00000563945 H7C0C1 242 aa20.32■□□□□ 0.84
HERC2-204ENST00000563945 IFRD1O00458 451 aaPredicted RBP20.32■□□□□ 0.84
HERC2-204ENST00000563945 GAPDHSO14556 408 aaPredicted RBP20.32■□□□□ 0.84
HERC2-204ENST00000563945 DDX3YO15523 660 aaKnown RBP20.32■□□□□ 0.84
HERC2-204ENST00000563945 PSTPIP1O43586 416 aa20.32■□□□□ 0.84
HERC2-204ENST00000563945 SRP72O76094 671 aaKnown RBP20.32■□□□□ 0.84
HERC2-204ENST00000563945 AGTP01019 485 aa20.32■□□□□ 0.84
HERC2-204ENST00000563945 CA5AP35218 305 aa20.32■□□□□ 0.84
HERC2-204ENST00000563945 ATP5OP48047 213 aa20.32■□□□□ 0.84
HERC2-204ENST00000563945 VAV2P52735 878 aa20.32■□□□□ 0.84
HERC2-204ENST00000563945 PRPSAP1Q14558 356 aa20.32■□□□□ 0.84
HERC2-204ENST00000563945 TAF1AQ15573 450 aaPredicted RBP20.32■□□□□ 0.84
HERC2-204ENST00000563945 BCL7AQ4VC05 210 aa20.32■□□□□ 0.84
HERC2-204ENST00000563945 ITPRIPL1Q6GPH6 555 aa20.32■□□□□ 0.84
HERC2-204ENST00000563945 ZNF517Q6ZMY9 492 aaPredicted RBP20.32■□□□□ 0.84
HERC2-204ENST00000563945 MED25Q71SY5 747 aa20.32■□□□□ 0.84
HERC2-204ENST00000563945 HOOK3Q86VS8 718 aa20.32■□□□□ 0.84
HERC2-204ENST00000563945 RCOR2Q8IZ40 523 aa20.32■□□□□ 0.84
HERC2-204ENST00000563945 HEXDCQ8WVB3 486 aa20.32■□□□□ 0.84
HERC2-204ENST00000563945 N4BP2L2Q92802 583 aaPredicted RBP20.32■□□□□ 0.84
HERC2-204ENST00000563945 ULK4Q96C45 1275 aa20.32■□□□□ 0.84
HERC2-204ENST00000563945 ABHD10Q9NUJ1 306 aa20.32■□□□□ 0.84
HERC2-204ENST00000563945 CUEDC1Q9NWM3 386 aaPredicted RBP20.32■□□□□ 0.84
HERC2-204ENST00000563945 POMT2Q9UKY4 750 aa20.32■□□□□ 0.84
HERC2-204ENST00000563945 INTUQ9ULD6 942 aa20.32■□□□□ 0.84
HERC2-204ENST00000563945 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.32■□□□□ 0.84
HERC2-204ENST00000563945 CCDC66A2RUB6 948 aa20.31■□□□□ 0.84
HERC2-204ENST00000563945 CRTAMO95727 393 aa20.31■□□□□ 0.84
HERC2-204ENST00000563945 AGXTP21549 392 aa20.31■□□□□ 0.84
HERC2-204ENST00000563945 LAMB3Q13751 1172 aa20.31■□□□□ 0.84
HERC2-204ENST00000563945 TAZQ16635 292 aa20.31■□□□□ 0.84
HERC2-204ENST00000563945 PRAMEF17Q5VTA0 474 aa20.31■□□□□ 0.84
HERC2-204ENST00000563945 JMJD6Q6NYC1 403 aaPredicted RBP20.31■□□□□ 0.84
HERC2-204ENST00000563945 RAB43Q86YS6 212 aa20.31■□□□□ 0.84
HERC2-204ENST00000563945 FDCSPQ8NFU4 85 aa20.31■□□□□ 0.84
HERC2-204ENST00000563945 HM13Q8TCT9 377 aa20.31■□□□□ 0.84
HERC2-204ENST00000563945 LRRC45Q96CN5 670 aa20.31■□□□□ 0.84
HERC2-204ENST00000563945 SGSM3Q96HU1 749 aa20.31■□□□□ 0.84
HERC2-204ENST00000563945 LINC00615Q96LM1 132 aaPredicted RBP20.31■□□□□ 0.84
HERC2-204ENST00000563945 RMDN2Q96LZ7 410 aa20.31■□□□□ 0.84
HERC2-204ENST00000563945 PPM1MQ96MI6 270 aa20.31■□□□□ 0.84
HERC2-204ENST00000563945 QKIQ96PU8 341 aaKnown RBP eCLIP20.31■□□□□ 0.84
HERC2-204ENST00000563945 CASS4Q9NQ75 786 aa20.31■□□□□ 0.84
HERC2-204ENST00000563945 GPR83Q9NYM4 423 aa20.31■□□□□ 0.84
HERC2-204ENST00000563945 FKBPLQ9UIM3 349 aa20.31■□□□□ 0.84
HERC2-204ENST00000563945 PADI2Q9Y2J8 665 aa20.31■□□□□ 0.84
HERC2-204ENST00000563945 ALG6Q9Y672 507 aa20.31■□□□□ 0.84
HERC2-204ENST00000563945 UTP20O75691 2785 aaKnown RBP20.31■□□□□ 0.84
HERC2-204ENST00000563945 TEX15Q9BXT5 2789 aa20.3■□□□□ 0.84
HERC2-204ENST00000563945 MED13Q9UHV7 2174 aa20.3■□□□□ 0.84
HERC2-204ENST00000563945 SORBS2O94875 1100 aaKnown RBP20.3■□□□□ 0.84
HERC2-204ENST00000563945 LCA5LO95447 670 aa20.3■□□□□ 0.84
HERC2-204ENST00000563945 HBQ1P09105 142 aa20.3■□□□□ 0.84
HERC2-204ENST00000563945 ITGALP20701 1170 aa20.3■□□□□ 0.84
HERC2-204ENST00000563945 PRDX3P30048 256 aaKnown RBP20.3■□□□□ 0.84
HERC2-204ENST00000563945 KYNUQ16719 465 aa20.3■□□□□ 0.84
HERC2-204ENST00000563945 HIST2H2BCQ6DN03 193 aa20.3■□□□□ 0.84
HERC2-204ENST00000563945 DAAM2Q86T65 1068 aa20.3■□□□□ 0.84
HERC2-204ENST00000563945 SYTL1Q8IYJ3 562 aa20.3■□□□□ 0.84
HERC2-204ENST00000563945 GPR135Q8IZ08 494 aa20.3■□□□□ 0.84
HERC2-204ENST00000563945 OR1L3Q8NH93 324 aa20.3■□□□□ 0.84
HERC2-204ENST00000563945 ADAMTS17Q8TE56 1095 aa20.3■□□□□ 0.84
HERC2-204ENST00000563945 NAT14Q8WUY8 206 aa20.3■□□□□ 0.84
HERC2-204ENST00000563945 RBM41Q96IZ5 413 aaKnown RBP20.3■□□□□ 0.84
HERC2-204ENST00000563945 COPS8Q99627 209 aa20.3■□□□□ 0.84
HERC2-204ENST00000563945 VPS37BQ9H9H4 285 aa20.3■□□□□ 0.84
HERC2-204ENST00000563945 LUZP4Q9P127 313 aa20.3■□□□□ 0.84
HERC2-204ENST00000563945 AAR2Q9Y312 384 aaKnown RBP20.3■□□□□ 0.84
HERC2-204ENST00000563945 E7EQ34 232 aa20.29■□□□□ 0.84
HERC2-204ENST00000563945 CEACAM4O75871 244 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms