RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 GDF5P43026 501 aa10.3□□□□□ -0.76
RNF40-204ENST00000563683 RPS9P46781 194 aaKnown RBP10.3□□□□□ -0.76
RNF40-204ENST00000563683 SLC11A1P49279 550 aa10.3□□□□□ -0.76
RNF40-204ENST00000563683 DGCR6Q14129 220 aa10.3□□□□□ -0.76
RNF40-204ENST00000563683 ZNF678Q5SXM1 525 aa10.3□□□□□ -0.76
RNF40-204ENST00000563683 TRMT11Q7Z4G4 463 aaKnown RBP10.3□□□□□ -0.76
RNF40-204ENST00000563683 SPATA19Q7Z5L4 167 aa10.3□□□□□ -0.76
RNF40-204ENST00000563683 SPRED1Q7Z699 444 aa10.3□□□□□ -0.76
RNF40-204ENST00000563683 NECAB2Q7Z6G3 386 aa10.3□□□□□ -0.76
RNF40-204ENST00000563683 RASAL3Q86YV0 1011 aa10.3□□□□□ -0.76
RNF40-204ENST00000563683 PLD3Q8IV08 490 aa10.3□□□□□ -0.76
RNF40-204ENST00000563683 ARHGAP12Q8IWW6 846 aa10.3□□□□□ -0.76
RNF40-204ENST00000563683 UMODL1-AS1Q8N2C9 162 aa10.3□□□□□ -0.76
RNF40-204ENST00000563683 TANKQ92844 425 aa10.3□□□□□ -0.76
RNF40-204ENST00000563683 FBXL20Q96IG2 436 aa10.3□□□□□ -0.76
RNF40-204ENST00000563683 AARSD1Q9BTE6 412 aaKnown RBP10.3□□□□□ -0.76
RNF40-204ENST00000563683 TMEM106CQ9BVX2 250 aa10.3□□□□□ -0.76
RNF40-204ENST00000563683 SEZ6LQ9BYH1 1024 aa10.3□□□□□ -0.76
RNF40-204ENST00000563683 TFB2MQ9H5Q4 396 aaKnown RBP10.3□□□□□ -0.76
RNF40-204ENST00000563683 FANCEQ9HB96 536 aa10.3□□□□□ -0.76
RNF40-204ENST00000563683 TMEM30AQ9NV96 361 aa10.3□□□□□ -0.76
RNF40-204ENST00000563683 CFAP97Q9P2B7 532 aa10.3□□□□□ -0.76
RNF40-204ENST00000563683 ADGRE2Q9UHX3 823 aa10.3□□□□□ -0.76
RNF40-204ENST00000563683 ANKRD66B4E2M5 251 aa10.3□□□□□ -0.76
RNF40-204ENST00000563683 OR1I1O60431 355 aa10.3□□□□□ -0.76
RNF40-204ENST00000563683 WDR47O94967 919 aa10.3□□□□□ -0.76
RNF40-204ENST00000563683 KCNA5P22460 613 aa10.3□□□□□ -0.76
RNF40-204ENST00000563683 LEPRP48357 1165 aaKnown RBP10.3□□□□□ -0.76
RNF40-204ENST00000563683 NEK2P51955 445 aa10.3□□□□□ -0.76
RNF40-204ENST00000563683 STC1P52823 247 aa10.3□□□□□ -0.76
RNF40-204ENST00000563683 DGKQP52824 942 aa10.3□□□□□ -0.76
RNF40-204ENST00000563683 C1QTNF8P60827 252 aa10.3□□□□□ -0.76
RNF40-204ENST00000563683 HMGCS1Q01581 520 aa10.3□□□□□ -0.76
RNF40-204ENST00000563683 TAF1AQ15573 450 aaPredicted RBP10.3□□□□□ -0.76
RNF40-204ENST00000563683 MORN1Q5T089 497 aa10.3□□□□□ -0.76
RNF40-204ENST00000563683 ZNF598Q86UK7 904 aaKnown RBP10.3□□□□□ -0.76
RNF40-204ENST00000563683 PARP8Q8N3A8 854 aa10.3□□□□□ -0.76
RNF40-204ENST00000563683 TMEM132CQ8N3T6 1108 aa10.3□□□□□ -0.76
RNF40-204ENST00000563683 GLMNQ92990 594 aa10.3□□□□□ -0.76
RNF40-204ENST00000563683 CEP19Q96LK0 163 aa10.3□□□□□ -0.76
RNF40-204ENST00000563683 ALPK1Q96QP1 1244 aa10.3□□□□□ -0.76
RNF40-204ENST00000563683 ROGDIQ9GZN7 287 aa10.3□□□□□ -0.76
RNF40-204ENST00000563683 NANOGQ9H9S0 305 aa10.3□□□□□ -0.76
RNF40-204ENST00000563683 ZNF556Q9HAH1 456 aa10.3□□□□□ -0.76
RNF40-204ENST00000563683 OAZ3Q9UMX2 235 aa10.3□□□□□ -0.76
RNF40-204ENST00000563683 USP3Q9Y6I4 520 aa10.3□□□□□ -0.76
RNF40-204ENST00000563683 MCM3APO60318 1980 aa10.3□□□□□ -0.76
RNF40-204ENST00000563683 GLYATL1P3A0A0U1RQE8 302 aa10.29□□□□□ -0.76
RNF40-204ENST00000563683 SEC14L2O76054 403 aa10.29□□□□□ -0.76
RNF40-204ENST00000563683 PSMB9P28065 219 aa10.29□□□□□ -0.76
RNF40-204ENST00000563683 GRB7Q14451 532 aa10.29□□□□□ -0.76
RNF40-204ENST00000563683 SPATS1Q496A3 300 aa10.29□□□□□ -0.76
RNF40-204ENST00000563683 LRRC58Q96CX6 371 aa10.29□□□□□ -0.76
RNF40-204ENST00000563683 ZNF641Q96N77 438 aaPredicted RBP10.29□□□□□ -0.76
RNF40-204ENST00000563683 MUC13Q9H3R2 512 aa10.29□□□□□ -0.76
RNF40-204ENST00000563683 MEAF6Q9HAF1 191 aa10.29□□□□□ -0.76
RNF40-204ENST00000563683 PCDH12Q9NPG4 1184 aa10.29□□□□□ -0.76
RNF40-204ENST00000563683 CD84Q9UIB8 345 aa10.29□□□□□ -0.76
RNF40-204ENST00000563683 CROCCQ5TZA2 2017 aa10.29□□□□□ -0.76
RNF40-204ENST00000563683 DOCK5Q9H7D0 1870 aa10.29□□□□□ -0.76
RNF40-204ENST00000563683 H0YAE9 185 aa10.29□□□□□ -0.76
RNF40-204ENST00000563683 DLGAP1O14490 977 aa10.29□□□□□ -0.76
RNF40-204ENST00000563683 NBNO60934 754 aa10.29□□□□□ -0.76
RNF40-204ENST00000563683 ANXA6P08133 673 aa10.29□□□□□ -0.76
RNF40-204ENST00000563683 ZNF37AP17032 561 aaPredicted RBP10.29□□□□□ -0.76
RNF40-204ENST00000563683 GNPDA1P46926 289 aa10.29□□□□□ -0.76
RNF40-204ENST00000563683 ATP4BP51164 291 aa10.29□□□□□ -0.76
RNF40-204ENST00000563683 DNAJB13P59910 316 aa10.29□□□□□ -0.76
RNF40-204ENST00000563683 DAB2P98082 770 aa10.29□□□□□ -0.76
RNF40-204ENST00000563683 SMARCB1Q12824 385 aa10.29□□□□□ -0.76
RNF40-204ENST00000563683 ARHGAP15Q53QZ3 475 aa10.29□□□□□ -0.76
RNF40-204ENST00000563683 ADGRF1Q5T601 910 aa10.29□□□□□ -0.76
RNF40-204ENST00000563683 TXNDC8Q6A555 127 aa10.29□□□□□ -0.76
RNF40-204ENST00000563683 FAM171BQ6P995 826 aa10.29□□□□□ -0.76
RNF40-204ENST00000563683 LINC00299Q6ZSB3 139 aa10.29□□□□□ -0.76
RNF40-204ENST00000563683 NPAS4Q8IUM7 802 aa10.29□□□□□ -0.76
RNF40-204ENST00000563683 TRPV3Q8NET8 790 aa10.29□□□□□ -0.76
RNF40-204ENST00000563683 GPR156Q8NFN8 814 aa10.29□□□□□ -0.76
RNF40-204ENST00000563683 OR10A6Q8NH74 314 aa10.29□□□□□ -0.76
RNF40-204ENST00000563683 APOLD1Q96LR9 279 aa10.29□□□□□ -0.76
RNF40-204ENST00000563683 C1QTNF1Q9BXJ1 281 aa10.29□□□□□ -0.76
RNF40-204ENST00000563683 TRPV5Q9NQA5 729 aa10.29□□□□□ -0.76
RNF40-204ENST00000563683 INTS10Q9NVR2 710 aaKnown RBP10.29□□□□□ -0.76
RNF40-204ENST00000563683 ERVK-11Q9UQG0 969 aa10.29□□□□□ -0.76
RNF40-204ENST00000563683 COL11A2P13942 1736 aaPredicted RBP10.29□□□□□ -0.76
RNF40-204ENST00000563683 UNCXA6NJT0 531 aa10.29□□□□□ -0.76
RNF40-204ENST00000563683 EI24O14681 340 aa10.29□□□□□ -0.76
RNF40-204ENST00000563683 STK16O75716 305 aa10.29□□□□□ -0.76
RNF40-204ENST00000563683 CDK14O94921 469 aa10.29□□□□□ -0.76
RNF40-204ENST00000563683 CLIC3O95833 236 aa10.29□□□□□ -0.76
RNF40-204ENST00000563683 COX7A2P14406 83 aa10.29□□□□□ -0.76
RNF40-204ENST00000563683 ARSAP15289 507 aa10.29□□□□□ -0.76
RNF40-204ENST00000563683 GJA1P17302 382 aa10.29□□□□□ -0.76
RNF40-204ENST00000563683 MATN1P21941 496 aa10.29□□□□□ -0.76
RNF40-204ENST00000563683 UFM1P61960 85 aa10.29□□□□□ -0.76
RNF40-204ENST00000563683 LSM3P62310 102 aaKnown RBP10.29□□□□□ -0.76
RNF40-204ENST00000563683 GPR17Q13304 367 aa10.29□□□□□ -0.76
RNF40-204ENST00000563683 GTF2H2Q13888 395 aa10.29□□□□□ -0.76
RNF40-204ENST00000563683 ACOX1Q15067 660 aa10.29□□□□□ -0.76
RNF40-204ENST00000563683 ZNF362Q5T0B9 420 aaPredicted RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms