RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 RARGP13631 454 aa2.88□□□□□ -1.95
HMGB1P33-201ENST00000563485 PSMA4P25789 261 aaKnown RBP2.88□□□□□ -1.95
HMGB1P33-201ENST00000563485 CAMPP49913 170 aa2.88□□□□□ -1.95
HMGB1P33-201ENST00000563485 HNRNPDQ14103 355 aaKnown RBP2.88□□□□□ -1.95
HMGB1P33-201ENST00000563485 KIAA0930Q6ICG6 404 aaPredicted RBP2.88□□□□□ -1.95
HMGB1P33-201ENST00000563485 ZNF554Q86TJ5 538 aa2.88□□□□□ -1.95
HMGB1P33-201ENST00000563485 TDRD7Q8NHU6 1098 aaKnown RBP2.88□□□□□ -1.95
HMGB1P33-201ENST00000563485 TBC1D16Q8TBP0 767 aa2.88□□□□□ -1.95
HMGB1P33-201ENST00000563485 HSD17B8Q92506 261 aa2.88□□□□□ -1.95
HMGB1P33-201ENST00000563485 SYT15Q9BQS2 421 aa2.88□□□□□ -1.95
HMGB1P33-201ENST00000563485 TRAF4Q9BUZ4 470 aaPredicted RBP2.88□□□□□ -1.95
HMGB1P33-201ENST00000563485 ABHD6Q9BV23 337 aa2.88□□□□□ -1.95
HMGB1P33-201ENST00000563485 MUC13Q9H3R2 512 aa2.88□□□□□ -1.95
HMGB1P33-201ENST00000563485 DNAJC18Q9H819 358 aa2.88□□□□□ -1.95
HMGB1P33-201ENST00000563485 CORO1CQ9ULV4 474 aaPredicted RBP2.88□□□□□ -1.95
HMGB1P33-201ENST00000563485 CMAHPQ9Y471 501 aa2.88□□□□□ -1.95
HMGB1P33-201ENST00000563485 SEC23IPQ9Y6Y8 1000 aaKnown RBP2.88□□□□□ -1.95
HMGB1P33-201ENST00000563485 IGLV7-46A0A075B6I9 117 aa2.87□□□□□ -1.95
HMGB1P33-201ENST00000563485 PRSS51A0A1B0GVH4 220 aa2.87□□□□□ -1.95
HMGB1P33-201ENST00000563485 MED19A0JLT2 244 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P33-201ENST00000563485 ATP6V0E1O15342 81 aa2.87□□□□□ -1.95
HMGB1P33-201ENST00000563485 NDUFS4O43181 175 aa2.87□□□□□ -1.95
HMGB1P33-201ENST00000563485 TPD52L2O43399 206 aaKnown RBP2.87□□□□□ -1.95
HMGB1P33-201ENST00000563485 RNASEH2AO75792 299 aaKnown RBP2.87□□□□□ -1.95
HMGB1P33-201ENST00000563485 TPPPO94811 219 aa2.87□□□□□ -1.95
HMGB1P33-201ENST00000563485 DUS4LO95620 317 aaKnown RBP2.87□□□□□ -1.95
HMGB1P33-201ENST00000563485 TBX18O95935 607 aa2.87□□□□□ -1.95
HMGB1P33-201ENST00000563485 GATA1P15976 413 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P33-201ENST00000563485 CDR2Q01850 454 aa2.87□□□□□ -1.95
HMGB1P33-201ENST00000563485 PLA2G7Q13093 441 aa2.87□□□□□ -1.95
HMGB1P33-201ENST00000563485 IKQ13123 557 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P33-201ENST00000563485 SNAI3Q3KNW1 292 aa2.87□□□□□ -1.95
HMGB1P33-201ENST00000563485 SARM1Q6SZW1 724 aa2.87□□□□□ -1.95
HMGB1P33-201ENST00000563485 P2RY8Q86VZ1 359 aa2.87□□□□□ -1.95
HMGB1P33-201ENST00000563485 ARID3BQ8IVW6 561 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P33-201ENST00000563485 SCYL3Q8IZE3 742 aa2.87□□□□□ -1.95
HMGB1P33-201ENST00000563485 TMTC2Q8N394 836 aa2.87□□□□□ -1.95
HMGB1P33-201ENST00000563485 CPSF7Q8N684 471 aaKnown RBP2.87□□□□□ -1.95
HMGB1P33-201ENST00000563485 ZNRF4Q8WWF5 429 aa2.87□□□□□ -1.95
HMGB1P33-201ENST00000563485 NSL1Q96IY1 281 aa2.87□□□□□ -1.95
HMGB1P33-201ENST00000563485 MAGED4Q96JG8 741 aa2.87□□□□□ -1.95
HMGB1P33-201ENST00000563485 C7orf26Q96N11 449 aa2.87□□□□□ -1.95
HMGB1P33-201ENST00000563485 DACH2Q96NX9 599 aa2.87□□□□□ -1.95
HMGB1P33-201ENST00000563485 AGAP3Q96P47 875 aa2.87□□□□□ -1.95
HMGB1P33-201ENST00000563485 PKP2Q99959 881 aa2.87□□□□□ -1.95
HMGB1P33-201ENST00000563485 NCAPGQ9BPX3 1015 aa2.87□□□□□ -1.95
HMGB1P33-201ENST00000563485 SLC26A6Q9BXS9 759 aa2.87□□□□□ -1.95
HMGB1P33-201ENST00000563485 FGFBP2Q9BYJ0 223 aa2.87□□□□□ -1.95
HMGB1P33-201ENST00000563485 SH2D4AQ9H788 454 aa2.87□□□□□ -1.95
HMGB1P33-201ENST00000563485 ACKR4Q9NPB9 350 aa2.87□□□□□ -1.95
HMGB1P33-201ENST00000563485 TAB2Q9NYJ8 693 aa2.87□□□□□ -1.95
HMGB1P33-201ENST00000563485 FLRT3Q9NZU0 649 aa2.87□□□□□ -1.95
HMGB1P33-201ENST00000563485 NENFQ9UMX5 172 aa2.87□□□□□ -1.95
HMGB1P33-201ENST00000563485 PCDHGA5Q9Y5G8 931 aa2.87□□□□□ -1.95
HMGB1P33-201ENST00000563485 TDRD15B5MCY1 1934 aaKnown RBP2.87□□□□□ -1.95
HMGB1P33-201ENST00000563485 SOS1Q07889 1333 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P33-201ENST00000563485 COL5A2P05997 1499 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P33-201ENST00000563485 A0A1W2PRB8 838 aa2.86□□□□□ -1.95
HMGB1P33-201ENST00000563485 ELOVL7A1L3X0 281 aa2.86□□□□□ -1.95
HMGB1P33-201ENST00000563485 FRMD3A2A2Y4 597 aa2.86□□□□□ -1.95
HMGB1P33-201ENST00000563485 TO15178 435 aa2.86□□□□□ -1.95
HMGB1P33-201ENST00000563485 DDX58O95786 925 aaKnown RBP2.86□□□□□ -1.95
HMGB1P33-201ENST00000563485 PPARGP37231 505 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P33-201ENST00000563485 CSRP3P50461 194 aa2.86□□□□□ -1.95
HMGB1P33-201ENST00000563485 SNRPEP62304 92 aaKnown RBP2.86□□□□□ -1.95
HMGB1P33-201ENST00000563485 PNRC1Q12796 327 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P33-201ENST00000563485 TEAD2Q15562 447 aa2.86□□□□□ -1.95
HMGB1P33-201ENST00000563485 CTU2Q2VPK5 515 aaKnown RBP2.86□□□□□ -1.95
HMGB1P33-201ENST00000563485 KLHL35Q6PF15 583 aa2.86□□□□□ -1.95
HMGB1P33-201ENST00000563485 PSRC1Q6PGN9 363 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P33-201ENST00000563485 DOK6Q6PKX4 331 aa2.86□□□□□ -1.95
HMGB1P33-201ENST00000563485 IL27RAQ6UWB1 636 aa2.86□□□□□ -1.95
HMGB1P33-201ENST00000563485 NAXEQ8NCW5 288 aa2.86□□□□□ -1.95
HMGB1P33-201ENST00000563485 OR4C3Q8NH37 302 aa2.86□□□□□ -1.95
HMGB1P33-201ENST00000563485 HPSE2Q8WWQ2 592 aa2.86□□□□□ -1.95
HMGB1P33-201ENST00000563485 POMGNT1Q8WZA1 660 aa2.86□□□□□ -1.95
HMGB1P33-201ENST00000563485 MOAP1Q96BY2 351 aa2.86□□□□□ -1.95
HMGB1P33-201ENST00000563485 FAM81BQ96LP2 452 aa2.86□□□□□ -1.95
HMGB1P33-201ENST00000563485 SGK494Q96LW2 274 aa2.86□□□□□ -1.95
HMGB1P33-201ENST00000563485 PPM1MQ96MI6 270 aa2.86□□□□□ -1.95
HMGB1P33-201ENST00000563485 CMTM3Q96MX0 182 aa2.86□□□□□ -1.95
HMGB1P33-201ENST00000563485 P2RY12Q9H244 342 aa2.86□□□□□ -1.95
HMGB1P33-201ENST00000563485 KAT14Q9H8E8 782 aa2.86□□□□□ -1.95
HMGB1P33-201ENST00000563485 HHATLQ9HCP6 504 aa2.86□□□□□ -1.95
HMGB1P33-201ENST00000563485 A4GALTQ9NPC4 353 aa2.86□□□□□ -1.95
HMGB1P33-201ENST00000563485 DIAPH3Q9NSV4 1193 aa2.86□□□□□ -1.95
HMGB1P33-201ENST00000563485 IRAK4Q9NWZ3 460 aa2.86□□□□□ -1.95
HMGB1P33-201ENST00000563485 RNF186Q9NXI6 227 aa2.86□□□□□ -1.95
HMGB1P33-201ENST00000563485 RIPK3Q9Y572 518 aa2.86□□□□□ -1.95
HMGB1P33-201ENST00000563485 LYVE1Q9Y5Y7 322 aa2.86□□□□□ -1.95
HMGB1P33-201ENST00000563485 SESN1Q9Y6P5 492 aa2.86□□□□□ -1.95
HMGB1P33-201ENST00000563485 MYH15Q9Y2K3 1946 aa2.85□□□□□ -1.95
HMGB1P33-201ENST00000563485 LOC101059948A0A1B0GTJ6 334 aa2.85□□□□□ -1.95
HMGB1P33-201ENST00000563485 A0A1W2PR77 199 aa2.85□□□□□ -1.95
HMGB1P33-201ENST00000563485 E9PI62 339 aa2.85□□□□□ -1.95
HMGB1P33-201ENST00000563485 NPHP1O15259 732 aa2.85□□□□□ -1.95
HMGB1P33-201ENST00000563485 PI15O43692 258 aa2.85□□□□□ -1.95
HMGB1P33-201ENST00000563485 OR2C1O95371 312 aa2.85□□□□□ -1.95
HMGB1P33-201ENST00000563485 PIGNO95427 931 aa2.85□□□□□ -1.95
HMGB1P33-201ENST00000563485 GABRB1P18505 474 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms