RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 ASLP04424 464 aa18.75■□□□□ 0.59
SMPD3-203ENST00000563226 XPAP23025 273 aaPredicted RBP18.75■□□□□ 0.59
SMPD3-203ENST00000563226 MMP12P39900 470 aa18.75■□□□□ 0.59
SMPD3-203ENST00000563226 SLC7A2P52569 658 aa18.75■□□□□ 0.59
SMPD3-203ENST00000563226 ERVK-8P63133 956 aa18.75■□□□□ 0.59
SMPD3-203ENST00000563226 LRRC36Q1X8D7 754 aa18.75■□□□□ 0.59
SMPD3-203ENST00000563226 ZXDCQ2QGD7 858 aaPredicted RBP18.75■□□□□ 0.59
SMPD3-203ENST00000563226 BLOC1S3Q6QNY0 202 aa18.75■□□□□ 0.59
SMPD3-203ENST00000563226 IZUMO2Q6UXV1 221 aa18.75■□□□□ 0.59
SMPD3-203ENST00000563226 MILR1Q7Z6M3 343 aa18.75■□□□□ 0.59
SMPD3-203ENST00000563226 FNDC5Q8NAU1 212 aa18.75■□□□□ 0.59
SMPD3-203ENST00000563226 N4BP2L2Q92802 583 aaPredicted RBP18.75■□□□□ 0.59
SMPD3-203ENST00000563226 ZNF184Q99676 751 aaPredicted RBP18.75■□□□□ 0.59
SMPD3-203ENST00000563226 RIC8BQ9NVN3 520 aa18.75■□□□□ 0.59
SMPD3-203ENST00000563226 TMEM181Q9P2C4 612 aa18.75■□□□□ 0.59
SMPD3-203ENST00000563226 ASPDHA6ND91 283 aa18.74■□□□□ 0.59
SMPD3-203ENST00000563226 EIF4E1BA6NMX2 242 aaKnown RBP18.74■□□□□ 0.59
SMPD3-203ENST00000563226 VASPP50552 380 aaPredicted RBP18.74■□□□□ 0.59
SMPD3-203ENST00000563226 DUSP6Q16828 381 aa18.74■□□□□ 0.59
SMPD3-203ENST00000563226 UBE2R2Q712K3 238 aaPredicted RBP18.74■□□□□ 0.59
SMPD3-203ENST00000563226 TECPR1Q7Z6L1 1165 aa18.74■□□□□ 0.59
SMPD3-203ENST00000563226 FGF13Q92913 245 aa18.74■□□□□ 0.59
SMPD3-203ENST00000563226 DCUN1D1Q96GG9 259 aa18.74■□□□□ 0.59
SMPD3-203ENST00000563226 BRINP2Q9C0B6 783 aa18.74■□□□□ 0.59
SMPD3-203ENST00000563226 DKK3Q9UBP4 350 aa18.74■□□□□ 0.59
SMPD3-203ENST00000563226 CD300AQ9UGN4 299 aa18.74■□□□□ 0.59
SMPD3-203ENST00000563226 ANGPTL3Q9Y5C1 460 aa18.74■□□□□ 0.59
SMPD3-203ENST00000563226 ANTXRLA6NF34 631 aa18.73■□□□□ 0.59
SMPD3-203ENST00000563226 VGLL3A8MV65 326 aa18.73■□□□□ 0.59
SMPD3-203ENST00000563226 K7EPI3 171 aa18.73■□□□□ 0.59
SMPD3-203ENST00000563226 FXYD1O00168 92 aa18.73■□□□□ 0.59
SMPD3-203ENST00000563226 KPNA3O00505 521 aaPredicted RBP18.73■□□□□ 0.59
SMPD3-203ENST00000563226 FFAR3O14843 346 aa18.73■□□□□ 0.59
SMPD3-203ENST00000563226 GPR42O15529 346 aa18.73■□□□□ 0.59
SMPD3-203ENST00000563226 SPINT1O43278 529 aa18.73■□□□□ 0.59
SMPD3-203ENST00000563226 SYNCRIPO60506 623 aaKnown RBP18.73■□□□□ 0.59
SMPD3-203ENST00000563226 PEX2P28328 305 aa18.73■□□□□ 0.59
SMPD3-203ENST00000563226 RPIAP49247 311 aa18.73■□□□□ 0.59
SMPD3-203ENST00000563226 ST8SIA6P61647 398 aa18.73■□□□□ 0.59
SMPD3-203ENST00000563226 ATP6AP1LQ52LC2 224 aa18.73■□□□□ 0.59
SMPD3-203ENST00000563226 TRAM1L1Q8N609 369 aa18.73■□□□□ 0.59
SMPD3-203ENST00000563226 PCYOX1LQ8NBM8 494 aa18.73■□□□□ 0.59
SMPD3-203ENST00000563226 SKA2Q8WVK7 121 aaPredicted RBP18.73■□□□□ 0.59
SMPD3-203ENST00000563226 VPS33AQ96AX1 596 aa18.73■□□□□ 0.59
SMPD3-203ENST00000563226 ROPN1LQ96C74 230 aa18.73■□□□□ 0.59
SMPD3-203ENST00000563226 ASB9Q96DX5 294 aa18.73■□□□□ 0.59
SMPD3-203ENST00000563226 GPATCH1Q9BRR8 931 aaKnown RBP18.73■□□□□ 0.59
SMPD3-203ENST00000563226 FARSBQ9NSD9 589 aaKnown RBP18.73■□□□□ 0.59
SMPD3-203ENST00000563226 ARL15Q9NXU5 204 aa18.73■□□□□ 0.59
SMPD3-203ENST00000563226 SUCOQ9UBS9 1254 aaKnown RBP18.73■□□□□ 0.59
SMPD3-203ENST00000563226 NDUFAF1Q9Y375 327 aa18.73■□□□□ 0.59
SMPD3-203ENST00000563226 RNF11Q9Y3C5 154 aa18.73■□□□□ 0.59
SMPD3-203ENST00000563226 OR2AG2A6NM03 316 aa18.73■□□□□ 0.59
SMPD3-203ENST00000563226 LSM1O15116 133 aaKnown RBP18.73■□□□□ 0.59
SMPD3-203ENST00000563226 ANGPT2O15123 496 aa18.73■□□□□ 0.59
SMPD3-203ENST00000563226 NUAK1O60285 661 aa18.73■□□□□ 0.59
SMPD3-203ENST00000563226 IL12AP29459 219 aa18.73■□□□□ 0.59
SMPD3-203ENST00000563226 HMOX2P30519 316 aa18.73■□□□□ 0.59
SMPD3-203ENST00000563226 MRPL19P49406 292 aaKnown RBP18.73■□□□□ 0.59
SMPD3-203ENST00000563226 CAPRIN1Q14444 709 aaKnown RBP18.73■□□□□ 0.59
SMPD3-203ENST00000563226 SHHQ15465 462 aa18.73■□□□□ 0.59
SMPD3-203ENST00000563226 RARS2Q5T160 578 aaKnown RBP18.73■□□□□ 0.59
SMPD3-203ENST00000563226 LIPIQ6XZB0 460 aa18.73■□□□□ 0.59
SMPD3-203ENST00000563226 GET4Q7L5D6 327 aaPredicted RBP18.73■□□□□ 0.59
SMPD3-203ENST00000563226 SMARCD2Q92925 531 aa18.73■□□□□ 0.59
SMPD3-203ENST00000563226 SPDL1Q96EA4 605 aa18.73■□□□□ 0.59
SMPD3-203ENST00000563226 LRIG1Q96JA1 1093 aa18.73■□□□□ 0.59
SMPD3-203ENST00000563226 WRAP53Q9BUR4 548 aaKnown RBP18.73■□□□□ 0.59
SMPD3-203ENST00000563226 FAM8A1Q9UBU6 413 aa18.73■□□□□ 0.59
SMPD3-203ENST00000563226 KIF26AQ9ULI4 1882 aaPredicted RBP18.73■□□□□ 0.59
SMPD3-203ENST00000563226 TMEM202A6NGA9 273 aa18.72■□□□□ 0.59
SMPD3-203ENST00000563226 HEPACAM2A8MVW5 462 aa18.72■□□□□ 0.59
SMPD3-203ENST00000563226 LOC730098B7Z3J9 87 aa18.72■□□□□ 0.59
SMPD3-203ENST00000563226 DNAJA2O60884 412 aa18.72■□□□□ 0.59
SMPD3-203ENST00000563226 EPORP19235 508 aa18.72■□□□□ 0.59
SMPD3-203ENST00000563226 RCAN2Q14206 197 aa18.72■□□□□ 0.59
SMPD3-203ENST00000563226 TRIM25Q14258 630 aaKnown RBP18.72■□□□□ 0.59
SMPD3-203ENST00000563226 NR6A1Q15406 480 aa18.72■□□□□ 0.59
SMPD3-203ENST00000563226 PDCD4Q53EL6 469 aaKnown RBP18.72■□□□□ 0.59
SMPD3-203ENST00000563226 DDHD1Q8NEL9 900 aa18.72■□□□□ 0.59
SMPD3-203ENST00000563226 CCT7Q99832 543 aa18.72■□□□□ 0.59
SMPD3-203ENST00000563226 ECSITQ9BQ95 431 aa18.72■□□□□ 0.59
SMPD3-203ENST00000563226 PFDN4Q9NQP4 134 aa18.72■□□□□ 0.59
SMPD3-203ENST00000563226 PSMD13Q9UNM6 376 aa18.72■□□□□ 0.59
SMPD3-203ENST00000563226 CCL27Q9Y4X3 112 aa18.72■□□□□ 0.59
SMPD3-203ENST00000563226 KIAA1549LQ6ZVL6 1849 aa18.72■□□□□ 0.59
SMPD3-203ENST00000563226 ZFC3H1O60293 1989 aaKnown RBP18.72■□□□□ 0.59
SMPD3-203ENST00000563226 PLK4O00444 970 aa18.72■□□□□ 0.59
SMPD3-203ENST00000563226 STK16O75716 305 aa18.72■□□□□ 0.59
SMPD3-203ENST00000563226 NFATC1O95644 943 aa18.72■□□□□ 0.59
SMPD3-203ENST00000563226 ANXA5P08758 320 aa18.72■□□□□ 0.59
SMPD3-203ENST00000563226 ELFN1P0C7U0 828 aa18.72■□□□□ 0.59
SMPD3-203ENST00000563226 MSH3P20585 1137 aa18.72■□□□□ 0.59
SMPD3-203ENST00000563226 FSHRP23945 695 aa18.72■□□□□ 0.59
SMPD3-203ENST00000563226 KCNC3Q14003 757 aa18.72■□□□□ 0.59
SMPD3-203ENST00000563226 FNDC3BQ53EP0 1204 aaKnown RBP18.72■□□□□ 0.59
SMPD3-203ENST00000563226 SLC44A4Q53GD3 710 aa18.72■□□□□ 0.59
SMPD3-203ENST00000563226 C6orf10Q5SRN2 563 aa18.72■□□□□ 0.59
SMPD3-203ENST00000563226 SPATA24Q86W54 205 aa18.72■□□□□ 0.59
SMPD3-203ENST00000563226 NUDT8Q8WV74 236 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms