RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 S100BP04271 92 aaPredicted RBP17.68■□□□□ 0.42
COMMD4-208ENST00000563220 FGF4P08620 206 aa17.68■□□□□ 0.42
COMMD4-208ENST00000563220 NDUFV2P19404 249 aa17.68■□□□□ 0.42
COMMD4-208ENST00000563220 PREPP48147 710 aa17.68■□□□□ 0.42
COMMD4-208ENST00000563220 RPIAP49247 311 aa17.68■□□□□ 0.42
COMMD4-208ENST00000563220 CDK3Q00526 305 aa17.68■□□□□ 0.42
COMMD4-208ENST00000563220 UBAP2LQ14157 1087 aaKnown RBP17.68■□□□□ 0.42
COMMD4-208ENST00000563220 INPP5AQ14642 412 aa17.68■□□□□ 0.42
COMMD4-208ENST00000563220 LSM12Q3MHD2 195 aaKnown RBP17.68■□□□□ 0.42
COMMD4-208ENST00000563220 TMEM259Q4ZIN3 620 aa17.68■□□□□ 0.42
COMMD4-208ENST00000563220 FAM91A1Q658Y4 838 aa17.68■□□□□ 0.42
COMMD4-208ENST00000563220 SULT1C3Q6IMI6 304 aa17.68■□□□□ 0.42
COMMD4-208ENST00000563220 NEK10Q6ZWH5 1172 aa17.68■□□□□ 0.42
COMMD4-208ENST00000563220 TREML1Q86YW5 311 aa17.68■□□□□ 0.42
COMMD4-208ENST00000563220 TRAPPC5Q8IUR0 188 aa17.68■□□□□ 0.42
COMMD4-208ENST00000563220 RASGRP3Q8IV61 690 aa17.68■□□□□ 0.42
COMMD4-208ENST00000563220 CLYBLQ8N0X4 340 aa17.68■□□□□ 0.42
COMMD4-208ENST00000563220 FAR2Q96K12 515 aa17.68■□□□□ 0.42
COMMD4-208ENST00000563220 EGFL8Q99944 293 aa17.68■□□□□ 0.42
COMMD4-208ENST00000563220 TMEM79Q9BSE2 394 aa17.68■□□□□ 0.42
COMMD4-208ENST00000563220 HGH1Q9BTY7 390 aa17.68■□□□□ 0.42
COMMD4-208ENST00000563220 PARVBQ9HBI1 364 aa17.68■□□□□ 0.42
COMMD4-208ENST00000563220 KLC4Q9NSK0 619 aa17.68■□□□□ 0.42
COMMD4-208ENST00000563220 MMP17Q9ULZ9 603 aa17.68■□□□□ 0.42
COMMD4-208ENST00000563220 SCML1Q9UN30 329 aa17.68■□□□□ 0.42
COMMD4-208ENST00000563220 TNPO3Q9Y5L0 923 aaKnown RBP17.68■□□□□ 0.42
COMMD4-208ENST00000563220 TBC1D3DA0A087WVF3 549 aa17.67■□□□□ 0.42
COMMD4-208ENST00000563220 TBC1D3IA0A087WXS9 549 aa17.67■□□□□ 0.42
COMMD4-208ENST00000563220 TBC1D3EA0A087X179 549 aa17.67■□□□□ 0.42
COMMD4-208ENST00000563220 TBC1D3KA0A087X1G2 549 aa17.67■□□□□ 0.42
COMMD4-208ENST00000563220 TBC1D3FA6NER0 549 aaPredicted RBP17.67■□□□□ 0.42
COMMD4-208ENST00000563220 LOC730098B7Z3J9 87 aa17.67■□□□□ 0.42
COMMD4-208ENST00000563220 TBC1D3LB9A6J9 549 aa17.67■□□□□ 0.42
COMMD4-208ENST00000563220 E9PBE3 544 aa17.67■□□□□ 0.42
COMMD4-208ENST00000563220 SDHDO14521 159 aa17.67■□□□□ 0.42
COMMD4-208ENST00000563220 VEGFDO43915 354 aa17.67■□□□□ 0.42
COMMD4-208ENST00000563220 KLHL41O60662 606 aa17.67■□□□□ 0.42
COMMD4-208ENST00000563220 C8GP07360 202 aa17.67■□□□□ 0.42
COMMD4-208ENST00000563220 TBC1D3HP0C7X1 549 aa17.67■□□□□ 0.42
COMMD4-208ENST00000563220 PDHA2P29803 388 aa17.67■□□□□ 0.42
COMMD4-208ENST00000563220 HSPA7P48741 367 aa17.67■□□□□ 0.42
COMMD4-208ENST00000563220 NAA20P61599 178 aa17.67■□□□□ 0.42
COMMD4-208ENST00000563220 TFF2Q03403 129 aa17.67■□□□□ 0.42
COMMD4-208ENST00000563220 ABRQ12979 859 aa17.67■□□□□ 0.42
COMMD4-208ENST00000563220 IRF4Q15306 451 aa17.67■□□□□ 0.42
COMMD4-208ENST00000563220 MLF2Q15773 248 aaPredicted RBP17.67■□□□□ 0.42
COMMD4-208ENST00000563220 TBC1D3GQ6DHY5 549 aa17.67■□□□□ 0.42
COMMD4-208ENST00000563220 TBC1D3CQ6IPX1 549 aa17.67■□□□□ 0.42
COMMD4-208ENST00000563220 XKR5Q6UX68 686 aa17.67■□□□□ 0.42
COMMD4-208ENST00000563220 SYVN1Q86TM6 617 aa17.67■□□□□ 0.42
COMMD4-208ENST00000563220 FAM124AQ86V42 546 aa17.67■□□□□ 0.42
COMMD4-208ENST00000563220 TBC1D3Q8IZP1 549 aaPredicted RBP17.67■□□□□ 0.42
COMMD4-208ENST00000563220 TMEM159Q96B96 161 aa17.67■□□□□ 0.42
COMMD4-208ENST00000563220 MAELQ96JY0 434 aaKnown RBP17.67■□□□□ 0.42
COMMD4-208ENST00000563220 KCNA7Q96RP8 456 aa17.67■□□□□ 0.42
COMMD4-208ENST00000563220 SLC17A9Q9BYT1 436 aa17.67■□□□□ 0.42
COMMD4-208ENST00000563220 TRIM33Q9UPN9 1127 aa17.67■□□□□ 0.42
COMMD4-208ENST00000563220 TRPC5OSA6NMA1 111 aa17.67■□□□□ 0.42
COMMD4-208ENST00000563220 MATN4O95460 622 aa17.67■□□□□ 0.42
COMMD4-208ENST00000563220 TRIM23P36406 574 aa17.67■□□□□ 0.42
COMMD4-208ENST00000563220 GDF5P43026 501 aa17.67■□□□□ 0.42
COMMD4-208ENST00000563220 SGCGQ13326 291 aa17.67■□□□□ 0.42
COMMD4-208ENST00000563220 GTF2H3Q13889 308 aa17.67■□□□□ 0.42
COMMD4-208ENST00000563220 KRT72Q14CN4 511 aa17.67■□□□□ 0.42
COMMD4-208ENST00000563220 SYTL3Q4VX76 610 aa17.67■□□□□ 0.42
COMMD4-208ENST00000563220 KIAA1161Q6NSJ0 714 aa17.67■□□□□ 0.42
COMMD4-208ENST00000563220 DOK6Q6PKX4 331 aa17.67■□□□□ 0.42
COMMD4-208ENST00000563220 KIAA1324Q6UXG2 1013 aaKnown RBP17.67■□□□□ 0.42
COMMD4-208ENST00000563220 Q6ZS52 159 aa17.67■□□□□ 0.42
COMMD4-208ENST00000563220 USP30Q70CQ3 517 aa17.67■□□□□ 0.42
COMMD4-208ENST00000563220 OR56A4Q8NGH8 313 aa17.67■□□□□ 0.42
COMMD4-208ENST00000563220 STON2Q8WXE9 905 aa17.67■□□□□ 0.42
COMMD4-208ENST00000563220 FOXJ1Q92949 421 aa17.67■□□□□ 0.42
COMMD4-208ENST00000563220 LINC00615Q96LM1 132 aaPredicted RBP17.67■□□□□ 0.42
COMMD4-208ENST00000563220 TEX101Q9BY14 249 aa17.67■□□□□ 0.42
COMMD4-208ENST00000563220 MEAF6Q9HAF1 191 aa17.67■□□□□ 0.42
COMMD4-208ENST00000563220 FZD4Q9ULV1 537 aa17.67■□□□□ 0.42
COMMD4-208ENST00000563220 GPR34Q9UPC5 381 aa17.67■□□□□ 0.42
COMMD4-208ENST00000563220 DNAJC15Q9Y5T4 150 aa17.67■□□□□ 0.42
COMMD4-208ENST00000563220 TRPM6Q9BX84 2022 aa17.67■□□□□ 0.42
COMMD4-208ENST00000563220 TCRBV21S2A2A0A5A6 115 aa17.66■□□□□ 0.42
COMMD4-208ENST00000563220 PRR5-ARHGAP8B1AHC4 643 aa17.66■□□□□ 0.42
COMMD4-208ENST00000563220 AZIN1O14977 448 aa17.66■□□□□ 0.42
COMMD4-208ENST00000563220 SLC16A5O15375 505 aa17.66■□□□□ 0.42
COMMD4-208ENST00000563220 POP7O75817 140 aaKnown RBP17.66■□□□□ 0.42
COMMD4-208ENST00000563220 MLYCDO95822 493 aa17.66■□□□□ 0.42
COMMD4-208ENST00000563220 NCF2P19878 526 aaPredicted RBP17.66■□□□□ 0.42
COMMD4-208ENST00000563220 MAT2AP31153 395 aaKnown RBP17.66■□□□□ 0.42
COMMD4-208ENST00000563220 ARHGAP8P85298 464 aa17.66■□□□□ 0.42
COMMD4-208ENST00000563220 ZXDCQ2QGD7 858 aaPredicted RBP17.66■□□□□ 0.42
COMMD4-208ENST00000563220 SWT1Q5T5J6 900 aaKnown RBP17.66■□□□□ 0.42
COMMD4-208ENST00000563220 CRTC3Q6UUV7 619 aa17.66■□□□□ 0.42
COMMD4-208ENST00000563220 GOLGA7Q7Z5G4 137 aa17.66■□□□□ 0.42
COMMD4-208ENST00000563220 C11orf96Q7Z7L8 435 aa17.66■□□□□ 0.42
COMMD4-208ENST00000563220 HORMAD1Q86X24 394 aa17.66■□□□□ 0.42
COMMD4-208ENST00000563220 CFAP206Q8IYR0 622 aa17.66■□□□□ 0.42
COMMD4-208ENST00000563220 AFAP1L2Q8N4X5 818 aa17.66■□□□□ 0.42
COMMD4-208ENST00000563220 DEFB123Q8N688 67 aa17.66■□□□□ 0.42
COMMD4-208ENST00000563220 GLMNQ92990 594 aa17.66■□□□□ 0.42
COMMD4-208ENST00000563220 ZNF514Q96K75 400 aaPredicted RBP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms