RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 SIX2Q9NPC8 291 aa6.65□□□□□ -1.34
TSPAN3-209ENST00000560715 HSPBP1Q9NZL4 362 aa6.65□□□□□ -1.34
TSPAN3-209ENST00000560715 KLQ9UEF7 1012 aa6.65□□□□□ -1.34
TSPAN3-209ENST00000560715 PCDHB4Q9Y5E5 795 aa6.65□□□□□ -1.34
TSPAN3-209ENST00000560715 COL11A2P13942 1736 aaPredicted RBP6.65□□□□□ -1.34
TSPAN3-209ENST00000560715 SDR42E2A6NKP2 422 aa6.65□□□□□ -1.35
TSPAN3-209ENST00000560715 MYO1GB0I1T2 1018 aa6.65□□□□□ -1.35
TSPAN3-209ENST00000560715 RNF103O00237 685 aa6.65□□□□□ -1.35
TSPAN3-209ENST00000560715 PPP1R11O60927 126 aaPredicted RBP6.65□□□□□ -1.35
TSPAN3-209ENST00000560715 ZC3H11AO75152 810 aaKnown RBP eCLIP6.65□□□□□ -1.35
TSPAN3-209ENST00000560715 CNPP09543 421 aaKnown RBP6.65□□□□□ -1.35
TSPAN3-209ENST00000560715 ZNF26P17031 533 aaPredicted RBP6.65□□□□□ -1.35
TSPAN3-209ENST00000560715 LAG3P18627 525 aa6.65□□□□□ -1.35
TSPAN3-209ENST00000560715 CFL1P23528 166 aaKnown RBP6.65□□□□□ -1.35
TSPAN3-209ENST00000560715 PRKCHP24723 683 aa6.65□□□□□ -1.35
TSPAN3-209ENST00000560715 TACR1P25103 407 aa6.65□□□□□ -1.35
TSPAN3-209ENST00000560715 PTGS2P35354 604 aa6.65□□□□□ -1.35
TSPAN3-209ENST00000560715 ATXN3P54252 364 aaPredicted RBP6.65□□□□□ -1.35
TSPAN3-209ENST00000560715 OTUD4Q01804 1114 aaKnown RBP6.65□□□□□ -1.35
TSPAN3-209ENST00000560715 PRKCEQ02156 737 aa6.65□□□□□ -1.35
TSPAN3-209ENST00000560715 TLE1Q04724 770 aa6.65□□□□□ -1.35
TSPAN3-209ENST00000560715 CCDC142Q17RM4 750 aa6.65□□□□□ -1.35
TSPAN3-209ENST00000560715 C2orf76Q3KRA6 126 aa6.65□□□□□ -1.35
TSPAN3-209ENST00000560715 UBE2UQ5VVX9 321 aa6.65□□□□□ -1.35
TSPAN3-209ENST00000560715 PLEKHG7Q6ZR37 379 aa6.65□□□□□ -1.35
TSPAN3-209ENST00000560715 TMEM26Q6ZUK4 368 aa6.65□□□□□ -1.35
TSPAN3-209ENST00000560715 GPRIN1Q7Z2K8 1008 aa6.65□□□□□ -1.35
TSPAN3-209ENST00000560715 DEFB107AQ8IZN7 70 aa6.65□□□□□ -1.35
TSPAN3-209ENST00000560715 LILRA2Q8N149 483 aa6.65□□□□□ -1.35
TSPAN3-209ENST00000560715 FAM71DQ8N9W8 422 aa6.65□□□□□ -1.35
TSPAN3-209ENST00000560715 NFKBIDQ8NI38 313 aa6.65□□□□□ -1.35
TSPAN3-209ENST00000560715 MZB1Q8WU39 189 aa6.65□□□□□ -1.35
TSPAN3-209ENST00000560715 DYNLL2Q96FJ2 89 aa6.65□□□□□ -1.35
TSPAN3-209ENST00000560715 NANOGQ9H9S0 305 aa6.65□□□□□ -1.35
TSPAN3-209ENST00000560715 SEMA4BQ9NPR2 832 aaPredicted RBP6.65□□□□□ -1.35
TSPAN3-209ENST00000560715 CFL2Q9Y281 166 aa6.65□□□□□ -1.35
TSPAN3-209ENST00000560715 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 TTC24A2A3L6 582 aaPredicted RBP6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 FAM90A18PA6NE21 464 aa6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 FAM90A16PA6NEW6 464 aa6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 FAM90A9PA6NNJ1 464 aa6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 FAM90A5PA8MXJ8 464 aa6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 I3L4J1 428 aa6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 CLDN3O15551 220 aa6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 ZW10O43264 779 aa6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 NOL3O60936 208 aaKnown RBP6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 BCL10O95999 233 aa6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 FAM90A15PP0C7V4 464 aa6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 FAM90A14PP0C7W9 464 aa6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 NELFEP18615 380 aaKnown RBP6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 ITIH1P19827 911 aa6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 ITGAXP20702 1163 aa6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 SLC15A1P46059 708 aa6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 OR1G1P47890 313 aa6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 AQP5P55064 265 aa6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 EIF3EP60228 445 aaKnown RBP6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 ECT2LQ008S8 904 aa6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 SPIRE1Q08AE8 756 aa6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 FCHO2Q0JRZ9 810 aa6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 GRSF1Q12849 480 aaKnown RBP eCLIP6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 PUM1Q14671 1186 aaKnown RBP eCLIP6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 GLRA4Q5JXX5 417 aa6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 C1orf185Q5T7R7 199 aa6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 UGT3A1Q6NUS8 523 aa6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 FAM122CQ6P4D5 195 aa6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 FIGNL1Q6PIW4 674 aa6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 KCTD1Q719H9 257 aa6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 ARID3BQ8IVW6 561 aaPredicted RBP6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 MAPKAPK5Q8IW41 473 aa6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 OR56B2PQ8NGI1 322 aa6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 EID2BQ96D98 161 aa6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 GIMAP5Q96F15 307 aa6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 FAM111AQ96PZ2 611 aa6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 TMEM79Q9BSE2 394 aa6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 JPH1Q9HDC5 661 aaPredicted RBP6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 ACP6Q9NPH0 428 aa6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 SLC35D1Q9NTN3 355 aa6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 PARVAQ9NVD7 372 aa6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 TXNDC16Q9P2K2 825 aa6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 VANGL2Q9ULK5 521 aa6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 NOSIPQ9Y314 301 aaKnown RBP6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 ZHX2Q9Y6X8 837 aa6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 FAM90A20PA6NIJ5 464 aa6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 GPR89AB7ZAQ6 455 aa6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 M0QYT0 321 aa6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 SOCS6O14544 535 aa6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 SLC16A6O15403 523 aa6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 DYRK3O43781 588 aa6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 LPXNO60711 386 aa6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 MTX2O75431 263 aa6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 OR52Z1P0C646 297 aa6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 GPR89BP0CG08 455 aa6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 CDH1P12830 882 aa6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 TBXAS1P24557 533 aaPredicted RBP6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 PTAFRP25105 342 aa6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 PTPN3P26045 913 aa6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 PSMB10P40306 273 aa6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 NAMPTP43490 491 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms