RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 ZNF286BP0CG31 522 aa13.67□□□□□ -0.22
CSPG4P12-202ENST00000559989 UGT2B10P36537 528 aa13.67□□□□□ -0.22
CSPG4P12-202ENST00000559989 GRB10Q13322 594 aa13.67□□□□□ -0.22
CSPG4P12-202ENST00000559989 PTPN20Q4JDL3 420 aa13.67□□□□□ -0.22
CSPG4P12-202ENST00000559989 C6orf183Q5T699 404 aa13.67□□□□□ -0.22
CSPG4P12-202ENST00000559989 PGAM4Q8N0Y7 254 aa13.67□□□□□ -0.22
CSPG4P12-202ENST00000559989 TMEM45AQ9NWC5 275 aa13.67□□□□□ -0.22
CSPG4P12-202ENST00000559989 KCTD5Q9NXV2 234 aa13.67□□□□□ -0.22
CSPG4P12-202ENST00000559989 MUSKO15146 869 aa13.67□□□□□ -0.22
CSPG4P12-202ENST00000559989 SEPT4O43236 478 aa13.67□□□□□ -0.22
CSPG4P12-202ENST00000559989 TRMT2AQ8IZ69 625 aaKnown RBP13.67□□□□□ -0.22
CSPG4P12-202ENST00000559989 TCTEX1D2Q8WW35 142 aa13.67□□□□□ -0.22
CSPG4P12-202ENST00000559989 UNKLQ9H9P5 680 aaKnown RBP13.67□□□□□ -0.22
CSPG4P12-202ENST00000559989 ADGRL2O95490 1459 aa13.67□□□□□ -0.22
CSPG4P12-202ENST00000559989 SIGLEC16A6NMB1 481 aa13.67□□□□□ -0.22
CSPG4P12-202ENST00000559989 POLR1CO15160 346 aaPredicted RBP13.67□□□□□ -0.22
CSPG4P12-202ENST00000559989 SLC37A4O43826 429 aa13.67□□□□□ -0.22
CSPG4P12-202ENST00000559989 PRDX6P30041 224 aa13.67□□□□□ -0.22
CSPG4P12-202ENST00000559989 SIRT2Q8IXJ6 389 aa13.67□□□□□ -0.22
CSPG4P12-202ENST00000559989 WNT8BQ93098 351 aa13.67□□□□□ -0.22
CSPG4P12-202ENST00000559989 FAM84BQ96KN1 310 aaPredicted RBP13.67□□□□□ -0.22
CSPG4P12-202ENST00000559989 TRUB2O95900 331 aaKnown RBP13.67□□□□□ -0.22
CSPG4P12-202ENST00000559989 GNG2P59768 71 aa13.67□□□□□ -0.22
CSPG4P12-202ENST00000559989 RAB4BP61018 213 aa13.67□□□□□ -0.22
CSPG4P12-202ENST00000559989 FGL1Q08830 312 aa13.67□□□□□ -0.22
CSPG4P12-202ENST00000559989 BST1Q10588 318 aa13.67□□□□□ -0.22
CSPG4P12-202ENST00000559989 BNIP1Q12981 228 aa13.67□□□□□ -0.22
CSPG4P12-202ENST00000559989 TREML1Q86YW5 311 aa13.67□□□□□ -0.22
CSPG4P12-202ENST00000559989 GSTCDQ8NEC7 633 aa13.67□□□□□ -0.22
CSPG4P12-202ENST00000559989 SULT4A1Q9BR01 284 aa13.67□□□□□ -0.22
CSPG4P12-202ENST00000559989 POLR2J2Q9GZM3 115 aaKnown RBP13.67□□□□□ -0.22
CSPG4P12-202ENST00000559989 IMP3Q9NV31 184 aaKnown RBP13.67□□□□□ -0.22
CSPG4P12-202ENST00000559989 SLC34A2O95436 690 aa13.66□□□□□ -0.22
CSPG4P12-202ENST00000559989 YAP1P46937 504 aaKnown RBP13.66□□□□□ -0.22
CSPG4P12-202ENST00000559989 RNF220Q5VTB9 566 aa13.66□□□□□ -0.22
CSPG4P12-202ENST00000559989 DCDC5Q6ZRR9 648 aa13.66□□□□□ -0.22
CSPG4P12-202ENST00000559989 FAM83HQ6ZRV2 1179 aaPredicted RBP13.66□□□□□ -0.22
CSPG4P12-202ENST00000559989 CUZD1Q86UP6 607 aa13.66□□□□□ -0.22
CSPG4P12-202ENST00000559989 ZNF410Q86VK4 478 aa13.66□□□□□ -0.22
CSPG4P12-202ENST00000559989 GALNT12Q8IXK2 581 aa13.66□□□□□ -0.22
CSPG4P12-202ENST00000559989 TNS4Q8IZW8 715 aa13.66□□□□□ -0.22
CSPG4P12-202ENST00000559989 PROKR2Q8NFJ6 384 aa13.66□□□□□ -0.22
CSPG4P12-202ENST00000559989 KCNN1Q92952 543 aa13.66□□□□□ -0.22
CSPG4P12-202ENST00000559989 ADAD1Q96M93 576 aaKnown RBP13.66□□□□□ -0.22
CSPG4P12-202ENST00000559989 HEPHQ9BQS7 1158 aa13.66□□□□□ -0.22
CSPG4P12-202ENST00000559989 HTATIP2Q9BUP3 242 aa13.66□□□□□ -0.22
CSPG4P12-202ENST00000559989 MKKSQ9NPJ1 570 aaPredicted RBP13.66□□□□□ -0.22
CSPG4P12-202ENST00000559989 TIMM13Q9Y5L4 95 aaPredicted RBP13.66□□□□□ -0.22
CSPG4P12-202ENST00000559989 AGAP5A6NIR3 686 aa13.66□□□□□ -0.22
CSPG4P12-202ENST00000559989 M0R233 179 aa13.66□□□□□ -0.22
CSPG4P12-202ENST00000559989 HCKP08631 526 aa13.66□□□□□ -0.22
CSPG4P12-202ENST00000559989 COL6A1P12109 1028 aa13.66□□□□□ -0.22
CSPG4P12-202ENST00000559989 CPN2P22792 545 aa13.66□□□□□ -0.22
CSPG4P12-202ENST00000559989 CDH8P55286 799 aa13.66□□□□□ -0.22
CSPG4P12-202ENST00000559989 SLC13A2Q13183 592 aa13.66□□□□□ -0.22
CSPG4P12-202ENST00000559989 EML3Q32P44 896 aa13.66□□□□□ -0.22
CSPG4P12-202ENST00000559989 PRPF38BQ5VTL8 546 aaKnown RBP13.66□□□□□ -0.22
CSPG4P12-202ENST00000559989 HHIPL2Q6UWX4 724 aa13.66□□□□□ -0.22
CSPG4P12-202ENST00000559989 CPNE9Q8IYJ1 553 aa13.66□□□□□ -0.22
CSPG4P12-202ENST00000559989 CDT1Q9H211 546 aa13.66□□□□□ -0.22
CSPG4P12-202ENST00000559989 PLEKHA3Q9HB20 300 aa13.66□□□□□ -0.22
CSPG4P12-202ENST00000559989 PCYOX1Q9UHG3 505 aa13.66□□□□□ -0.22
CSPG4P12-202ENST00000559989 SH2B3Q9UQQ2 575 aa13.66□□□□□ -0.22
CSPG4P12-202ENST00000559989 PNPLA6Q8IY17 1366 aa13.66□□□□□ -0.22
CSPG4P12-202ENST00000559989 HRGP04196 525 aa13.66□□□□□ -0.22
CSPG4P12-202ENST00000559989 IL7RP16871 459 aa13.66□□□□□ -0.22
CSPG4P12-202ENST00000559989 GNAZP19086 355 aa13.66□□□□□ -0.22
CSPG4P12-202ENST00000559989 PLA2G4EQ3MJ16 856 aa13.66□□□□□ -0.22
CSPG4P12-202ENST00000559989 FBXO43Q4G163 708 aa13.66□□□□□ -0.22
CSPG4P12-202ENST00000559989 FAM151BQ6UXP7 276 aa13.66□□□□□ -0.22
CSPG4P12-202ENST00000559989 SEMA6BQ9H3T3 888 aa13.66□□□□□ -0.22
CSPG4P12-202ENST00000559989 ASAH2Q9NR71 780 aa13.66□□□□□ -0.22
CSPG4P12-202ENST00000559989 C1orf196B1AJZ1 125 aa13.66□□□□□ -0.22
CSPG4P12-202ENST00000559989 FGF1P05230 155 aa13.66□□□□□ -0.22
CSPG4P12-202ENST00000559989 CTHP32929 405 aa13.66□□□□□ -0.22
CSPG4P12-202ENST00000559989 ZER1Q7Z7L7 766 aa13.66□□□□□ -0.22
CSPG4P12-202ENST00000559989 CELF1Q92879 486 aaKnown RBP13.66□□□□□ -0.22
CSPG4P12-202ENST00000559989 PPM1MQ96MI6 270 aa13.66□□□□□ -0.22
CSPG4P12-202ENST00000559989 ARL8BQ9NVJ2 186 aa13.66□□□□□ -0.22
CSPG4P12-202ENST00000559989 HTR3EA5X5Y0 456 aa13.66□□□□□ -0.22
CSPG4P12-202ENST00000559989 CYP1A2P05177 515 aa13.66□□□□□ -0.22
CSPG4P12-202ENST00000559989 ALPPP05187 535 aa13.66□□□□□ -0.22
CSPG4P12-202ENST00000559989 GKN3PP0CG01 181 aa13.66□□□□□ -0.22
CSPG4P12-202ENST00000559989 OR12D2P58182 307 aa13.66□□□□□ -0.22
CSPG4P12-202ENST00000559989 RIN1Q13671 783 aa13.66□□□□□ -0.22
CSPG4P12-202ENST00000559989 CEP68Q76N32 757 aa13.66□□□□□ -0.22
CSPG4P12-202ENST00000559989 ARL14Q8N4G2 192 aa13.66□□□□□ -0.22
CSPG4P12-202ENST00000559989 COX18Q8N8Q8 333 aa13.66□□□□□ -0.22
CSPG4P12-202ENST00000559989 FUZQ9BT04 418 aa13.66□□□□□ -0.22
CSPG4P12-202ENST00000559989 GPR89AB7ZAQ6 455 aa13.66□□□□□ -0.22
CSPG4P12-202ENST00000559989 E9PAM4 449 aa13.66□□□□□ -0.22
CSPG4P12-202ENST00000559989 SCELO95171 688 aa13.66□□□□□ -0.22
CSPG4P12-202ENST00000559989 GPR89BP0CG08 455 aa13.66□□□□□ -0.22
CSPG4P12-202ENST00000559989 SLC5A3P53794 718 aa13.66□□□□□ -0.22
CSPG4P12-202ENST00000559989 ZACNQ401N2 412 aa13.66□□□□□ -0.22
CSPG4P12-202ENST00000559989 LIN52Q52LA3 116 aa13.66□□□□□ -0.22
CSPG4P12-202ENST00000559989 ANGEL2Q5VTE6 544 aaKnown RBP13.66□□□□□ -0.22
CSPG4P12-202ENST00000559989 ABHD5Q8WTS1 349 aa13.66□□□□□ -0.22
CSPG4P12-202ENST00000559989 RAD9AQ99638 391 aa13.66□□□□□ -0.22
CSPG4P12-202ENST00000559989 OSMRQ99650 979 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms