RNA–Protein interactions for RNA: ENST00000558787.1

MARK3-215, Transcript of microtubule affinity regulating kinase 3, human

TSL 2

Gene MARK3, Length 758 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-215	ENST00000558787	NDST3	O95803	873 aa		6.87	□□□□□ -1.31
MARK3-215	ENST00000558787	PRKAR1A	P10644	381 aa		6.87	□□□□□ -1.31
MARK3-215	ENST00000558787	BRAF	P15056	766 aa		6.87	□□□□□ -1.31
MARK3-215	ENST00000558787	ZFX	P17010	805 aa	Predicted RBP	6.87	□□□□□ -1.31
MARK3-215	ENST00000558787	ZNF7	P17097	686 aa	Predicted RBP	6.87	□□□□□ -1.31
MARK3-215	ENST00000558787	MAGEA1	P43355	309 aa		6.87	□□□□□ -1.31
MARK3-215	ENST00000558787	LEPR	P48357	1165 aa	Known RBP	6.87	□□□□□ -1.31
MARK3-215	ENST00000558787	SEPHS1	P49903	392 aa		6.87	□□□□□ -1.31
MARK3-215	ENST00000558787	UBE2I	P63279	158 aa	Known RBP	6.87	□□□□□ -1.31
MARK3-215	ENST00000558787	MC2R	Q01718	297 aa		6.87	□□□□□ -1.31
MARK3-215	ENST00000558787	KIR2DS5	Q14953	304 aa		6.87	□□□□□ -1.31
MARK3-215	ENST00000558787	PRKD1	Q15139	912 aa	Predicted RBP	6.87	□□□□□ -1.31
MARK3-215	ENST00000558787	CHRNA6	Q15825	494 aa		6.87	□□□□□ -1.31
MARK3-215	ENST00000558787	TAZ	Q16635	292 aa		6.87	□□□□□ -1.31
MARK3-215	ENST00000558787	INSC	Q1MX18	579 aa		6.87	□□□□□ -1.31
MARK3-215	ENST00000558787	SPRED3	Q2MJR0	410 aa		6.87	□□□□□ -1.31
MARK3-215	ENST00000558787	ATP13A5	Q4VNC0	1218 aa		6.87	□□□□□ -1.31
MARK3-215	ENST00000558787	SIRPB2	Q5JXA9	342 aa		6.87	□□□□□ -1.31
MARK3-215	ENST00000558787	COLEC12	Q5KU26	742 aa		6.87	□□□□□ -1.31
MARK3-215	ENST00000558787	ATP1A1-AS1	Q5TC04	95 aa		6.87	□□□□□ -1.31
MARK3-215	ENST00000558787	LRRC38	Q5VT99	294 aa		6.87	□□□□□ -1.31
MARK3-215	ENST00000558787	KDELC1	Q6UW63	502 aa		6.87	□□□□□ -1.31
MARK3-215	ENST00000558787	SPOCD1	Q6ZMY3	1216 aa		6.87	□□□□□ -1.31
MARK3-215	ENST00000558787	MICALCL	Q6ZW33	695 aa		6.87	□□□□□ -1.31
MARK3-215	ENST00000558787	ZAR1	Q86SH2	424 aa		6.87	□□□□□ -1.31
MARK3-215	ENST00000558787	KIAA1328	Q86T90	577 aa		6.87	□□□□□ -1.31
MARK3-215	ENST00000558787	PTRH1	Q86Y79	214 aa	Known RBP	6.87	□□□□□ -1.31
MARK3-215	ENST00000558787	KRTAP19-1	Q8IUB9	90 aa		6.87	□□□□□ -1.31
MARK3-215	ENST00000558787	PHYKPL	Q8IUZ5	450 aa		6.87	□□□□□ -1.31
MARK3-215	ENST00000558787	TRIM48	Q8IWZ4	208 aa		6.87	□□□□□ -1.31
MARK3-215	ENST00000558787	RHOT2	Q8IXI1	618 aa		6.87	□□□□□ -1.31
MARK3-215	ENST00000558787	RAVER1	Q8IY67	606 aa	Known RBP	6.87	□□□□□ -1.31
MARK3-215	ENST00000558787	TTC30B	Q8N4P2	665 aa		6.87	□□□□□ -1.31
MARK3-215	ENST00000558787	TRAM1L1	Q8N609	369 aa		6.87	□□□□□ -1.31
MARK3-215	ENST00000558787	GDAP1	Q8TB36	358 aa		6.87	□□□□□ -1.31
MARK3-215	ENST00000558787	TFB1M	Q8WVM0	346 aa	Known RBP	6.87	□□□□□ -1.31
MARK3-215	ENST00000558787	SH3KBP1	Q96B97	665 aa		6.87	□□□□□ -1.31
MARK3-215	ENST00000558787	OXNAD1	Q96HP4	312 aa	Predicted RBP	6.87	□□□□□ -1.31
MARK3-215	ENST00000558787	ELMO2	Q96JJ3	720 aa		6.87	□□□□□ -1.31
MARK3-215	ENST00000558787	TGM7	Q96PF1	710 aa		6.87	□□□□□ -1.31
MARK3-215	ENST00000558787	DPYSL5	Q9BPU6	564 aa		6.87	□□□□□ -1.31
MARK3-215	ENST00000558787	HERPUD2	Q9BSE4	406 aa		6.87	□□□□□ -1.31
MARK3-215	ENST00000558787	ZSCAN5A	Q9BUG6	496 aa		6.87	□□□□□ -1.31
MARK3-215	ENST00000558787	DDA1	Q9BW61	102 aa		6.87	□□□□□ -1.31
MARK3-215	ENST00000558787	HEMGN	Q9BXL5	484 aa		6.87	□□□□□ -1.31
MARK3-215	ENST00000558787	ASPSCR1	Q9BZE9	553 aa		6.87	□□□□□ -1.31
MARK3-215	ENST00000558787	B3GNT4	Q9C0J1	378 aa		6.87	□□□□□ -1.31
MARK3-215	ENST00000558787	IL26	Q9NPH9	171 aa		6.87	□□□□□ -1.31
MARK3-215	ENST00000558787	KCND1	Q9NSA2	647 aa		6.87	□□□□□ -1.31
MARK3-215	ENST00000558787	STARD5	Q9NSY2	213 aa		6.87	□□□□□ -1.31
MARK3-215	ENST00000558787	IL17B	Q9UHF5	180 aa		6.87	□□□□□ -1.31
MARK3-215	ENST00000558787	LCMT1	Q9UIC8	334 aa		6.87	□□□□□ -1.31
MARK3-215	ENST00000558787	PILRA	Q9UKJ1	303 aa		6.87	□□□□□ -1.31
MARK3-215	ENST00000558787	WDR37	Q9Y2I8	494 aa		6.87	□□□□□ -1.31
MARK3-215	ENST00000558787	ZKSCAN5	Q9Y2L8	839 aa		6.87	□□□□□ -1.31
MARK3-215	ENST00000558787	PPP2R2C	Q9Y2T4	447 aa		6.87	□□□□□ -1.31
MARK3-215	ENST00000558787	PCDHA13	Q9Y5I0	950 aa		6.87	□□□□□ -1.31
MARK3-215	ENST00000558787	HEMK1	Q9Y5R4	338 aa	Predicted RBP	6.87	□□□□□ -1.31
MARK3-215	ENST00000558787	ALG6	Q9Y672	507 aa		6.87	□□□□□ -1.31
MARK3-215	ENST00000558787	UBR5	O95071	2799 aa	Predicted RBP	6.87	□□□□□ -1.31
MARK3-215	ENST00000558787	MAST4	O15021	2626 aa		6.87	□□□□□ -1.31
MARK3-215	ENST00000558787	NBAS	A2RRP1	2371 aa		6.87	□□□□□ -1.31
MARK3-215	ENST00000558787	LOC285095	A0A1B0GVY8	99 aa		6.86	□□□□□ -1.31
MARK3-215	ENST00000558787	CYSRT1	A8MQ03	144 aa		6.86	□□□□□ -1.31
MARK3-215	ENST00000558787	KMO	O15229	486 aa		6.86	□□□□□ -1.31
MARK3-215	ENST00000558787	KRT86	O43790	486 aa		6.86	□□□□□ -1.31
MARK3-215	ENST00000558787	STK17B	O94768	372 aa		6.86	□□□□□ -1.31
MARK3-215	ENST00000558787	UBXN7	O94888	489 aa		6.86	□□□□□ -1.31
MARK3-215	ENST00000558787	AGT	P01019	485 aa		6.86	□□□□□ -1.31
MARK3-215	ENST00000558787	VIP	P01282	170 aa		6.86	□□□□□ -1.31
MARK3-215	ENST00000558787	ZNF28	P17035	718 aa		6.86	□□□□□ -1.31
MARK3-215	ENST00000558787	AMD1	P17707	334 aa		6.86	□□□□□ -1.31
MARK3-215	ENST00000558787	F8A1	P23610	371 aa		6.86	□□□□□ -1.31
MARK3-215	ENST00000558787	SLC1A1	P43005	524 aa		6.86	□□□□□ -1.31
MARK3-215	ENST00000558787	VAV2	P52735	878 aa		6.86	□□□□□ -1.31
MARK3-215	ENST00000558787	CTSC	P53634	463 aa		6.86	□□□□□ -1.31
MARK3-215	ENST00000558787	DCDC1	P59894	354 aa		6.86	□□□□□ -1.31
MARK3-215	ENST00000558787	PPP1CA	P62136	330 aa		6.86	□□□□□ -1.31
MARK3-215	ENST00000558787	FOXM1	Q08050	763 aa		6.86	□□□□□ -1.31
MARK3-215	ENST00000558787	KIF5A	Q12840	1032 aa		6.86	□□□□□ -1.31
MARK3-215	ENST00000558787	TMEM115	Q12893	351 aa	Predicted RBP	6.86	□□□□□ -1.31
MARK3-215	ENST00000558787	OLIG2	Q13516	323 aa		6.86	□□□□□ -1.31
MARK3-215	ENST00000558787	MAP7	Q14244	749 aa		6.86	□□□□□ -1.31
MARK3-215	ENST00000558787	GPR18	Q14330	331 aa		6.86	□□□□□ -1.31
MARK3-215	ENST00000558787	CCDC70	Q6NSX1	233 aa		6.86	□□□□□ -1.31
MARK3-215	ENST00000558787	FAM151B	Q6UXP7	276 aa		6.86	□□□□□ -1.31
MARK3-215	ENST00000558787	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	6.86	□□□□□ -1.31
MARK3-215	ENST00000558787	ZNF662	Q6ZS27	426 aa		6.86	□□□□□ -1.31
MARK3-215	ENST00000558787	FAM92B	Q6ZTR7	304 aa		6.86	□□□□□ -1.31
MARK3-215	ENST00000558787	TMEM26	Q6ZUK4	368 aa		6.86	□□□□□ -1.31
MARK3-215	ENST00000558787	PID1	Q7Z2X4	250 aa		6.86	□□□□□ -1.31
MARK3-215	ENST00000558787	C11orf96	Q7Z7L8	435 aa		6.86	□□□□□ -1.31
MARK3-215	ENST00000558787	LRRTM4	Q86VH4	590 aa		6.86	□□□□□ -1.31
MARK3-215	ENST00000558787	TRAPPC5	Q8IUR0	188 aa		6.86	□□□□□ -1.31
MARK3-215	ENST00000558787	CCDC50	Q8IVM0	306 aa		6.86	□□□□□ -1.31
MARK3-215	ENST00000558787	ZNF567	Q8N184	647 aa		6.86	□□□□□ -1.31
MARK3-215	ENST00000558787	RASGEF1A	Q8N9B8	481 aa		6.86	□□□□□ -1.31
MARK3-215	ENST00000558787	ACRBP	Q8NEB7	543 aa		6.86	□□□□□ -1.31
MARK3-215	ENST00000558787	IPMK	Q8NFU5	416 aa		6.86	□□□□□ -1.31
MARK3-215	ENST00000558787	BLOC1S5	Q8TDH9	187 aa		6.86	□□□□□ -1.31

Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms