RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 HORMAD1Q86X24 394 aa20■□□□□ 0.79
SNRPA1-205ENST00000558036 CFAP206Q8IYR0 622 aa20■□□□□ 0.79
SNRPA1-205ENST00000558036 ZNF687Q8N1G0 1237 aa20■□□□□ 0.79
SNRPA1-205ENST00000558036 DCBLD1Q8N8Z6 715 aa20■□□□□ 0.79
SNRPA1-205ENST00000558036 TRMOQ9BU70 441 aa20■□□□□ 0.79
SNRPA1-205ENST00000558036 WDR26Q9H7D7 661 aa20■□□□□ 0.79
SNRPA1-205ENST00000558036 LMAN1LQ9HAT1 526 aa20■□□□□ 0.79
SNRPA1-205ENST00000558036 DNAJC28Q9NX36 388 aa20■□□□□ 0.79
SNRPA1-205ENST00000558036 E2F3O00716 465 aa19.99■□□□□ 0.79
SNRPA1-205ENST00000558036 FCHO1O14526 889 aa19.99■□□□□ 0.79
SNRPA1-205ENST00000558036 TAPBPO15533 448 aa19.99■□□□□ 0.79
SNRPA1-205ENST00000558036 S100BP04271 92 aaPredicted RBP19.99■□□□□ 0.79
SNRPA1-205ENST00000558036 EPHA3P29320 983 aa19.99■□□□□ 0.79
SNRPA1-205ENST00000558036 PRDX3P30048 256 aaKnown RBP19.99■□□□□ 0.79
SNRPA1-205ENST00000558036 GDF5P43026 501 aa19.99■□□□□ 0.79
SNRPA1-205ENST00000558036 HSPA7P48741 367 aa19.99■□□□□ 0.79
SNRPA1-205ENST00000558036 UBXN2BQ14CS0 331 aa19.99■□□□□ 0.79
SNRPA1-205ENST00000558036 USP30Q70CQ3 517 aa19.99■□□□□ 0.79
SNRPA1-205ENST00000558036 KBTBD6Q86V97 674 aa19.99■□□□□ 0.79
SNRPA1-205ENST00000558036 PGBD3Q8N328 593 aa19.99■□□□□ 0.79
SNRPA1-205ENST00000558036 PDPRQ8NCN5 879 aa19.99■□□□□ 0.79
SNRPA1-205ENST00000558036 OR52B2Q96RD2 323 aa19.99■□□□□ 0.79
SNRPA1-205ENST00000558036 KCNA7Q96RP8 456 aa19.99■□□□□ 0.79
SNRPA1-205ENST00000558036 FOXQ1Q9C009 403 aa19.99■□□□□ 0.79
SNRPA1-205ENST00000558036 EPHX3Q9H6B9 360 aa19.99■□□□□ 0.79
SNRPA1-205ENST00000558036 EBF1Q9UH73 591 aa19.99■□□□□ 0.79
SNRPA1-205ENST00000558036 CIDEBQ9UHD4 219 aa19.99■□□□□ 0.79
SNRPA1-205ENST00000558036 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.99■□□□□ 0.79
SNRPA1-205ENST00000558036 SLC5A10A0PJK1 596 aa19.99■□□□□ 0.79
SNRPA1-205ENST00000558036 EIF3FO00303 357 aaPredicted RBP19.99■□□□□ 0.79
SNRPA1-205ENST00000558036 RPIAP49247 311 aa19.99■□□□□ 0.79
SNRPA1-205ENST00000558036 FOXA1P55317 472 aa19.99■□□□□ 0.79
SNRPA1-205ENST00000558036 GALNT1Q10472 559 aaPredicted RBP19.99■□□□□ 0.79
SNRPA1-205ENST00000558036 GAS6Q14393 721 aa19.99■□□□□ 0.79
SNRPA1-205ENST00000558036 GALNTL6Q49A17 601 aa19.99■□□□□ 0.79
SNRPA1-205ENST00000558036 ZNF658BQ4V348 819 aaPredicted RBP19.99■□□□□ 0.79
SNRPA1-205ENST00000558036 ANO7Q6IWH7 933 aa19.99■□□□□ 0.79
SNRPA1-205ENST00000558036 ZNF483Q8TF39 744 aaPredicted RBP19.99■□□□□ 0.79
SNRPA1-205ENST00000558036 TEX101Q9BY14 249 aa19.99■□□□□ 0.79
SNRPA1-205ENST00000558036 TM7SF3Q9NS93 570 aa19.99■□□□□ 0.79
SNRPA1-205ENST00000558036 ARL15Q9NXU5 204 aa19.99■□□□□ 0.79
SNRPA1-205ENST00000558036 APOBEC2Q9Y235 224 aaKnown RBP19.99■□□□□ 0.79
SNRPA1-205ENST00000558036 TRAF6Q9Y4K3 522 aa19.99■□□□□ 0.79
SNRPA1-205ENST00000558036 VEGFDO43915 354 aa19.98■□□□□ 0.79
SNRPA1-205ENST00000558036 POP7O75817 140 aaKnown RBP19.98■□□□□ 0.79
SNRPA1-205ENST00000558036 ZP2Q05996 745 aa19.98■□□□□ 0.79
SNRPA1-205ENST00000558036 LCP2Q13094 533 aa19.98■□□□□ 0.79
SNRPA1-205ENST00000558036 XKR5Q6UX68 686 aa19.98■□□□□ 0.79
SNRPA1-205ENST00000558036 RHBDF1Q96CC6 855 aa19.98■□□□□ 0.79
SNRPA1-205ENST00000558036 TMEM79Q9BSE2 394 aa19.98■□□□□ 0.79
SNRPA1-205ENST00000558036 HGH1Q9BTY7 390 aa19.98■□□□□ 0.79
SNRPA1-205ENST00000558036 SLC12A9Q9BXP2 914 aa19.98■□□□□ 0.79
SNRPA1-205ENST00000558036 PREBQ9HCU5 417 aa19.98■□□□□ 0.79
SNRPA1-205ENST00000558036 PTBP2Q9UKA9 531 aaKnown RBP19.98■□□□□ 0.79
SNRPA1-205ENST00000558036 SORCS3Q9UPU3 1222 aa19.98■□□□□ 0.79
SNRPA1-205ENST00000558036 MPC1LP0DKB6 136 aa19.97■□□□□ 0.79
SNRPA1-205ENST00000558036 IGFALSP35858 605 aa19.97■□□□□ 0.79
SNRPA1-205ENST00000558036 NFE2L1Q14494 772 aa19.97■□□□□ 0.79
SNRPA1-205ENST00000558036 C11orf96Q7Z7L8 435 aa19.97■□□□□ 0.79
SNRPA1-205ENST00000558036 ADHFE1Q8IWW8 467 aa19.97■□□□□ 0.79
SNRPA1-205ENST00000558036 CDK15Q96Q40 435 aa19.97■□□□□ 0.79
SNRPA1-205ENST00000558036 C1QTNF3Q9BXJ4 246 aa19.97■□□□□ 0.79
SNRPA1-205ENST00000558036 PARVBQ9HBI1 364 aa19.97■□□□□ 0.79
SNRPA1-205ENST00000558036 WWOXQ9NZC7 414 aa19.97■□□□□ 0.79
SNRPA1-205ENST00000558036 FBXL21Q9UKT6 434 aa19.97■□□□□ 0.79
SNRPA1-205ENST00000558036 CA5BQ9Y2D0 317 aa19.97■□□□□ 0.79
SNRPA1-205ENST00000558036 ATXN2Q99700 1313 aaKnown RBP19.97■□□□□ 0.79
SNRPA1-205ENST00000558036 E9PBE3 544 aa19.97■□□□□ 0.79
SNRPA1-205ENST00000558036 GFYI3L273 518 aa19.97■□□□□ 0.79
SNRPA1-205ENST00000558036 KLHL41O60662 606 aa19.97■□□□□ 0.79
SNRPA1-205ENST00000558036 C8GP07360 202 aa19.97■□□□□ 0.79
SNRPA1-205ENST00000558036 TRIM23P36406 574 aa19.97■□□□□ 0.79
SNRPA1-205ENST00000558036 RBBP7Q16576 425 aa19.97■□□□□ 0.79
SNRPA1-205ENST00000558036 PUS10Q3MIT2 529 aaKnown RBP19.97■□□□□ 0.79
SNRPA1-205ENST00000558036 OR52B6Q8NGF0 335 aa19.97■□□□□ 0.79
SNRPA1-205ENST00000558036 AGAP11Q8TF27 550 aa19.97■□□□□ 0.79
SNRPA1-205ENST00000558036 SLC23A2Q9UGH3 650 aa19.97■□□□□ 0.79
SNRPA1-205ENST00000558036 ZNF225Q9UK10 706 aa19.97■□□□□ 0.79
SNRPA1-205ENST00000558036 TMCO1Q9UM00 188 aa19.97■□□□□ 0.79
SNRPA1-205ENST00000558036 CCNT2O60583 730 aaKnown RBP19.96■□□□□ 0.79
SNRPA1-205ENST00000558036 SNUPNO95149 360 aaKnown RBP19.96■□□□□ 0.79
SNRPA1-205ENST00000558036 CBX6O95503 412 aa19.96■□□□□ 0.79
SNRPA1-205ENST00000558036 CLDN2P57739 230 aa19.96■□□□□ 0.79
SNRPA1-205ENST00000558036 BTKQ06187 659 aa19.96■□□□□ 0.79
SNRPA1-205ENST00000558036 UBAP2LQ14157 1087 aaKnown RBP19.96■□□□□ 0.79
SNRPA1-205ENST00000558036 ZXDCQ2QGD7 858 aaPredicted RBP19.96■□□□□ 0.79
SNRPA1-205ENST00000558036 FAM83HQ6ZRV2 1179 aaPredicted RBP19.96■□□□□ 0.79
SNRPA1-205ENST00000558036 SIX5Q8N196 739 aa19.96■□□□□ 0.79
SNRPA1-205ENST00000558036 GLMNQ92990 594 aa19.96■□□□□ 0.79
SNRPA1-205ENST00000558036 ZNF514Q96K75 400 aaPredicted RBP19.96■□□□□ 0.79
SNRPA1-205ENST00000558036 BTBD1Q9H0C5 482 aa19.96■□□□□ 0.79
SNRPA1-205ENST00000558036 STN1Q9H668 368 aaKnown RBP19.96■□□□□ 0.79
SNRPA1-205ENST00000558036 RDH14Q9HBH5 336 aa19.96■□□□□ 0.79
SNRPA1-205ENST00000558036 VTI1BQ9UEU0 232 aa19.96■□□□□ 0.79
SNRPA1-205ENST00000558036 GPR34Q9UPC5 381 aa19.96■□□□□ 0.79
SNRPA1-205ENST00000558036 MATN4O95460 622 aa19.96■□□□□ 0.79
SNRPA1-205ENST00000558036 FUCA1P04066 466 aa19.96■□□□□ 0.79
SNRPA1-205ENST00000558036 BNIP1Q12981 228 aa19.96■□□□□ 0.79
SNRPA1-205ENST00000558036 FZD5Q13467 585 aa19.96■□□□□ 0.79
SNRPA1-205ENST00000558036 PCBP2Q15366 365 aaKnown RBP eCLIP19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms