RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 C17orf113A0A1B0GUU1 675 aa12.08□□□□□ -0.48
PSEN1-220ENST00000557037 GSAPA4D1B5 854 aa12.08□□□□□ -0.48
PSEN1-220ENST00000557037 FOXO6A8MYZ6 492 aa12.08□□□□□ -0.48
PSEN1-220ENST00000557037 MAP3K7O43318 606 aa12.08□□□□□ -0.48
PSEN1-220ENST00000557037 PROM1O43490 865 aa12.08□□□□□ -0.48
PSEN1-220ENST00000557037 VEGFDO43915 354 aa12.08□□□□□ -0.48
PSEN1-220ENST00000557037 PRAMEF2O60811 474 aa12.08□□□□□ -0.48
PSEN1-220ENST00000557037 OR2B3O76000 313 aa12.08□□□□□ -0.48
PSEN1-220ENST00000557037 CDK14O94921 469 aa12.08□□□□□ -0.48
PSEN1-220ENST00000557037 SMC2O95347 1197 aa12.08□□□□□ -0.48
PSEN1-220ENST00000557037 MTHFD1P11586 935 aaKnown RBP12.08□□□□□ -0.48
PSEN1-220ENST00000557037 DNASE1P24855 282 aa12.08□□□□□ -0.48
PSEN1-220ENST00000557037 MMP13P45452 471 aa12.08□□□□□ -0.48
PSEN1-220ENST00000557037 DMPKQ09013 629 aa12.08□□□□□ -0.48
PSEN1-220ENST00000557037 XRCC4Q13426 336 aa12.08□□□□□ -0.48
PSEN1-220ENST00000557037 PKP1Q13835 747 aa12.08□□□□□ -0.48
PSEN1-220ENST00000557037 PCOLCEQ15113 449 aa12.08□□□□□ -0.48
PSEN1-220ENST00000557037 CAMK4Q16566 473 aa12.08□□□□□ -0.48
PSEN1-220ENST00000557037 TUBB8Q3ZCM7 444 aa12.08□□□□□ -0.48
PSEN1-220ENST00000557037 RALGPS1Q5JS13 557 aa12.08□□□□□ -0.48
PSEN1-220ENST00000557037 FAM83HQ6ZRV2 1179 aaPredicted RBP12.08□□□□□ -0.48
PSEN1-220ENST00000557037 SHISA6Q6ZSJ9 500 aa12.08□□□□□ -0.48
PSEN1-220ENST00000557037 CDHR3Q6ZTQ4 885 aa12.08□□□□□ -0.48
PSEN1-220ENST00000557037 C11orf96Q7Z7L8 435 aa12.08□□□□□ -0.48
PSEN1-220ENST00000557037 SPPL2CQ8IUH8 684 aa12.08□□□□□ -0.48
PSEN1-220ENST00000557037 OR4E2Q8NGC2 313 aa12.08□□□□□ -0.48
PSEN1-220ENST00000557037 SMARCE1Q969G3 411 aa12.08□□□□□ -0.48
PSEN1-220ENST00000557037 GLYATL1Q969I3 302 aa12.08□□□□□ -0.48
PSEN1-220ENST00000557037 CCDC34Q96HJ3 373 aa12.08□□□□□ -0.48
PSEN1-220ENST00000557037 KCTD15Q96SI1 283 aaPredicted RBP12.08□□□□□ -0.48
PSEN1-220ENST00000557037 MESP1Q9BRJ9 268 aa12.08□□□□□ -0.48
PSEN1-220ENST00000557037 SELENOOQ9BVL4 669 aa12.08□□□□□ -0.48
PSEN1-220ENST00000557037 AP1M1Q9BXS5 423 aa12.08□□□□□ -0.48
PSEN1-220ENST00000557037 TSPAN10Q9H1Z9 355 aaPredicted RBP12.08□□□□□ -0.48
PSEN1-220ENST00000557037 PTGFRNQ9P2B2 879 aa12.08□□□□□ -0.48
PSEN1-220ENST00000557037 SLC24A2Q9UI40 661 aa12.08□□□□□ -0.48
PSEN1-220ENST00000557037 DNPEPQ9ULA0 475 aa12.08□□□□□ -0.48
PSEN1-220ENST00000557037 AP4E1Q9UPM8 1137 aa12.08□□□□□ -0.48
PSEN1-220ENST00000557037 ZNF835Q9Y2P0 537 aa12.08□□□□□ -0.48
PSEN1-220ENST00000557037 HS3ST3B1Q9Y662 390 aa12.08□□□□□ -0.48
PSEN1-220ENST00000557037 HCFC1P51610 2035 aa12.08□□□□□ -0.48
PSEN1-220ENST00000557037 HRNRQ86YZ3 2850 aaPredicted RBP12.07□□□□□ -0.48
PSEN1-220ENST00000557037 NKX2-6A6NCS4 301 aa12.07□□□□□ -0.48
PSEN1-220ENST00000557037 FAM227AF5H4B4 570 aa12.07□□□□□ -0.48
PSEN1-220ENST00000557037 LY6G6DO95868 133 aa12.07□□□□□ -0.48
PSEN1-220ENST00000557037 CTSBP07858 339 aa12.07□□□□□ -0.48
PSEN1-220ENST00000557037 HLA-DPA1P20036 260 aa12.07□□□□□ -0.48
PSEN1-220ENST00000557037 ZNF143P52747 638 aaPredicted RBP12.07□□□□□ -0.48
PSEN1-220ENST00000557037 DGKQP52824 942 aa12.07□□□□□ -0.48
PSEN1-220ENST00000557037 AIF1P55008 147 aa12.07□□□□□ -0.48
PSEN1-220ENST00000557037 PRKAA1Q13131 559 aa12.07□□□□□ -0.48
PSEN1-220ENST00000557037 DEFB110Q30KQ9 67 aa12.07□□□□□ -0.48
PSEN1-220ENST00000557037 PPP6R3Q5H9R7 873 aaPredicted RBP12.07□□□□□ -0.48
PSEN1-220ENST00000557037 RHBDD2Q6NTF9 364 aa12.07□□□□□ -0.48
PSEN1-220ENST00000557037 FAM20CQ8IXL6 584 aa12.07□□□□□ -0.48
PSEN1-220ENST00000557037 DMRTC2Q8IXT2 367 aaPredicted RBP12.07□□□□□ -0.48
PSEN1-220ENST00000557037 GPR26Q8NDV2 337 aa12.07□□□□□ -0.48
PSEN1-220ENST00000557037 CCHCR1Q8TD31 782 aa12.07□□□□□ -0.48
PSEN1-220ENST00000557037 AGAP11Q8TF27 550 aa12.07□□□□□ -0.48
PSEN1-220ENST00000557037 ZFPM2Q8WW38 1151 aa12.07□□□□□ -0.48
PSEN1-220ENST00000557037 N4BP2L2Q92802 583 aaPredicted RBP12.07□□□□□ -0.48
PSEN1-220ENST00000557037 ZNF653Q96CK0 615 aa12.07□□□□□ -0.48
PSEN1-220ENST00000557037 ALPK1Q96QP1 1244 aa12.07□□□□□ -0.48
PSEN1-220ENST00000557037 VPS16Q9H269 839 aa12.07□□□□□ -0.48
PSEN1-220ENST00000557037 SLC22A11Q9NSA0 550 aa12.07□□□□□ -0.48
PSEN1-220ENST00000557037 PPT2Q9UMR5 302 aa12.07□□□□□ -0.48
PSEN1-220ENST00000557037 ZANQ9Y493 2812 aa12.06□□□□□ -0.48
PSEN1-220ENST00000557037 RGSL1A5PLK6 1076 aa12.06□□□□□ -0.48
PSEN1-220ENST00000557037 FAM90A27PA6NNH2 459 aa12.06□□□□□ -0.48
PSEN1-220ENST00000557037 HCRTR1O43613 425 aa12.06□□□□□ -0.48
PSEN1-220ENST00000557037 PRLP01236 227 aa12.06□□□□□ -0.48
PSEN1-220ENST00000557037 SLC4A1P02730 911 aa12.06□□□□□ -0.48
PSEN1-220ENST00000557037 MSL3P1P0C860 447 aa12.06□□□□□ -0.48
PSEN1-220ENST00000557037 DSC2Q02487 901 aa12.06□□□□□ -0.48
PSEN1-220ENST00000557037 RBBP7Q16576 425 aa12.06□□□□□ -0.48
PSEN1-220ENST00000557037 ANKRD20A8PQ5CZ79 823 aa12.06□□□□□ -0.48
PSEN1-220ENST00000557037 MARC1Q5VT66 337 aa12.06□□□□□ -0.48
PSEN1-220ENST00000557037 Q6ZPB1 254 aaPredicted RBP12.06□□□□□ -0.48
PSEN1-220ENST00000557037 RAVER1Q8IY67 606 aaKnown RBP12.06□□□□□ -0.48
PSEN1-220ENST00000557037 ZNF655Q8N720 491 aaPredicted RBP12.06□□□□□ -0.48
PSEN1-220ENST00000557037 OR11G2Q8NGC1 345 aa12.06□□□□□ -0.48
PSEN1-220ENST00000557037 PROKR1Q8TCW9 393 aa12.06□□□□□ -0.48
PSEN1-220ENST00000557037 NSMCE1Q8WV22 266 aa12.06□□□□□ -0.48
PSEN1-220ENST00000557037 INSM2Q96T92 566 aaPredicted RBP12.06□□□□□ -0.48
PSEN1-220ENST00000557037 NRTNQ99748 197 aa12.06□□□□□ -0.48
PSEN1-220ENST00000557037 NUP85Q9BW27 656 aa12.06□□□□□ -0.48
PSEN1-220ENST00000557037 UCK2Q9BZX2 261 aa12.06□□□□□ -0.48
PSEN1-220ENST00000557037 ZNF160Q9HCG1 818 aa12.06□□□□□ -0.48
PSEN1-220ENST00000557037 TXLNGQ9NUQ3 528 aa12.06□□□□□ -0.48
PSEN1-220ENST00000557037 ZNF358Q9NW07 568 aa12.06□□□□□ -0.48
PSEN1-220ENST00000557037 KCNN3Q9UGI6 736 aa12.06□□□□□ -0.48
PSEN1-220ENST00000557037 AP1M2Q9Y6Q5 423 aa12.06□□□□□ -0.48
PSEN1-220ENST00000557037 BICDL2A1A5D9 508 aa12.05□□□□□ -0.48
PSEN1-220ENST00000557037 MAFKO60675 156 aa12.05□□□□□ -0.48
PSEN1-220ENST00000557037 POP7O75817 140 aaKnown RBP12.05□□□□□ -0.48
PSEN1-220ENST00000557037 PBLDP30039 288 aaPredicted RBP12.05□□□□□ -0.48
PSEN1-220ENST00000557037 PRDX3P30048 256 aaKnown RBP12.05□□□□□ -0.48
PSEN1-220ENST00000557037 SOX11P35716 441 aa12.05□□□□□ -0.48
PSEN1-220ENST00000557037 RPL7AP62424 266 aaKnown RBP12.05□□□□□ -0.48
PSEN1-220ENST00000557037 TMPRSS15P98073 1019 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms