RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 IPO11Q9UI26 975 aaKnown RBP5.03□□□□□ -1.6
TMEM260-210ENST00000556422 ERVK-11Q9UQG0 969 aa5.03□□□□□ -1.6
TMEM260-210ENST00000556422 CHTOPQ9Y3Y2 248 aaKnown RBP5.03□□□□□ -1.6
TMEM260-210ENST00000556422 SNX13Q9Y5W8 968 aa5.03□□□□□ -1.6
TMEM260-210ENST00000556422 CHD9Q3L8U1 2897 aa5.03□□□□□ -1.6
TMEM260-210ENST00000556422 SZT2Q5T011 3432 aa5.03□□□□□ -1.6
TMEM260-210ENST00000556422 A0A096LPK6 155 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 AURKAO14965 403 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 PER2O15055 1255 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 ADAM12O43184 909 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 HAUS5O94927 633 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 SLC35E2BP0CK96 405 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 PTPN4P29074 926 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 SPRP35270 261 aaPredicted RBP5.02□□□□□ -1.61
TMEM260-210ENST00000556422 PPP3CCP48454 512 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 MAXP61244 160 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 POU6F2P78424 691 aaPredicted RBP5.02□□□□□ -1.61
TMEM260-210ENST00000556422 ZNF45Q02386 682 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 PCDH1Q08174 1060 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 C19orf57Q0VDD7 668 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 TAF10Q12962 218 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 GPR17Q13304 367 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 NFYCQ13952 458 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 ODF1Q14990 250 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 RABGAP1LQ5R372 815 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 PKN3Q6P5Z2 889 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 CIR1Q86X95 450 aaPredicted RBP5.02□□□□□ -1.61
TMEM260-210ENST00000556422 REM2Q8IYK8 340 aaPredicted RBP5.02□□□□□ -1.61
TMEM260-210ENST00000556422 CENPLQ8N0S6 344 aaPredicted RBP5.02□□□□□ -1.61
TMEM260-210ENST00000556422 PGBD5Q8N414 524 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 PNPLA1Q8N8W4 532 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 TTC29Q8NA56 475 aaPredicted RBP5.02□□□□□ -1.61
TMEM260-210ENST00000556422 C11orf65Q8NCR3 313 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 PIWIL2Q8TC59 973 aaKnown RBP5.02□□□□□ -1.61
TMEM260-210ENST00000556422 FAM216AQ8WUB2 273 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 TADA1Q96BN2 335 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 ERLEC1Q96DZ1 483 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 MOCOSQ96EN8 888 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 KLHL5Q96PQ7 755 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 CITED4Q96RK1 184 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 RBM4BQ9BQ04 359 aaKnown RBP5.02□□□□□ -1.61
TMEM260-210ENST00000556422 C17orf80Q9BSJ5 609 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 FICDQ9BVA6 458 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 RBM4Q9BWF3 364 aaKnown RBP5.02□□□□□ -1.61
TMEM260-210ENST00000556422 VN1R3Q9BXE9 311 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 FBRSL1Q9HCM7 1045 aaKnown RBP5.02□□□□□ -1.61
TMEM260-210ENST00000556422 HMX1Q9NP08 348 aaPredicted RBP5.02□□□□□ -1.61
TMEM260-210ENST00000556422 TAS2R7Q9NYW3 318 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 ENTPD4Q9Y227 616 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 DOCK6Q96HP0 2047 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 TTC24A2A3L6 582 aaPredicted RBP5.02□□□□□ -1.61
TMEM260-210ENST00000556422 TARM1B6A8C7 271 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 M0R3H8 397 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 SLC25A17O43808 307 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 ADAM23O75077 832 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 ULK1O75385 1050 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 PMPCBO75439 489 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 ANXA9O76027 345 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 GALTP07902 379 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 RHOQP17081 205 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 VCLP18206 1134 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 PAMP19021 973 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 PIK3CBP42338 1070 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 SLC1A2P43004 574 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 SLC1A6P48664 564 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 HARS2P49590 506 aaKnown RBP5.02□□□□□ -1.61
TMEM260-210ENST00000556422 BCAP31P51572 246 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 ATP12AP54707 1039 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 RACK1P63244 317 aaKnown RBP5.02□□□□□ -1.61
TMEM260-210ENST00000556422 TNK2Q07912 1038 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 CTBP1Q13363 440 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 PEX6Q13608 980 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 HNRNPDQ14103 355 aaKnown RBP5.02□□□□□ -1.61
TMEM260-210ENST00000556422 ZNF460Q14592 562 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 C16orf72Q14CZ0 275 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 TIGD2Q4W5G0 525 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 PCID2Q5JVF3 399 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 CACHD1Q5VU97 1274 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 RAP1GAP2Q684P5 730 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 TIGD7Q6NT04 549 aaPredicted RBP5.02□□□□□ -1.61
TMEM260-210ENST00000556422 PM20D2Q8IYS1 436 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 ANGPTL6Q8NI99 470 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 DTD1Q8TEA8 209 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 PSMG2Q969U7 264 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 RAB7BQ96AH8 199 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 VWCEQ96DN2 955 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 IMP4Q96G21 291 aaKnown RBP5.02□□□□□ -1.61
TMEM260-210ENST00000556422 PPP1R2P1Q96PQ5 205 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 FAM193BQ96PV7 902 aaPredicted RBP5.02□□□□□ -1.61
TMEM260-210ENST00000556422 ZYG11BQ9C0D3 744 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 TAS2R1Q9NYW7 299 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 UBA2Q9UBT2 640 aaPredicted RBP5.02□□□□□ -1.61
TMEM260-210ENST00000556422 KLHL3Q9UH77 587 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 TCAF1Q9Y4C2 921 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 PIAS3Q9Y6X2 628 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 ANKRD12Q6UB98 2062 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 GSAPA4D1B5 854 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 OR6C75A6NL08 312 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 PITPNM1O00562 1244 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 POLR1CO15160 346 aaPredicted RBP5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms