RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 SLC38A7Q9NVC3 462 aa4.39□□□□□ -1.71
ATXN3-241ENST00000556374 PNPOQ9NVS9 261 aa4.39□□□□□ -1.71
ATXN3-241ENST00000556374 ARHGEF38Q9NXL2 777 aa4.39□□□□□ -1.71
ATXN3-241ENST00000556374 PLK2Q9NYY3 685 aa4.39□□□□□ -1.71
ATXN3-241ENST00000556374 PTTG2Q9NZH5 202 aa4.39□□□□□ -1.71
ATXN3-241ENST00000556374 ADA2Q9NZK5 511 aa4.39□□□□□ -1.71
ATXN3-241ENST00000556374 NCKIPSDQ9NZQ3 722 aa4.39□□□□□ -1.71
ATXN3-241ENST00000556374 TMEM216Q9P0N5 145 aa4.39□□□□□ -1.71
ATXN3-241ENST00000556374 STK39Q9UEW8 545 aa4.39□□□□□ -1.71
ATXN3-241ENST00000556374 EMCNQ9ULC0 261 aa4.39□□□□□ -1.71
ATXN3-241ENST00000556374 SLC39A10Q9ULF5 831 aa4.39□□□□□ -1.71
ATXN3-241ENST00000556374 PIN4Q9Y237 131 aaKnown RBP4.39□□□□□ -1.71
ATXN3-241ENST00000556374 POMPQ9Y244 141 aa4.39□□□□□ -1.71
ATXN3-241ENST00000556374 AAR2Q9Y312 384 aaKnown RBP4.39□□□□□ -1.71
ATXN3-241ENST00000556374 TNPO3Q9Y5L0 923 aaKnown RBP4.39□□□□□ -1.71
ATXN3-241ENST00000556374 MTCH2Q9Y6C9 303 aa4.39□□□□□ -1.71
ATXN3-241ENST00000556374 NUMBLQ9Y6R0 609 aa4.39□□□□□ -1.71
ATXN3-241ENST00000556374 CITO14578 2027 aa4.39□□□□□ -1.71
ATXN3-241ENST00000556374 NRCAMQ92823 1304 aa4.39□□□□□ -1.71
ATXN3-241ENST00000556374 TANC1Q9C0D5 1861 aa4.39□□□□□ -1.71
ATXN3-241ENST00000556374 PTPRSQ13332 1948 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 LOC100653049A0A140TA62 436 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.38□□□□□ -1.71
ATXN3-241ENST00000556374 E2F8A0AVK6 867 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 MED19A0JLT2 244 aaPredicted RBP4.38□□□□□ -1.71
ATXN3-241ENST00000556374 HEATR9A2RTY3 570 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 EME2A4GXA9 379 aaPredicted RBP4.38□□□□□ -1.71
ATXN3-241ENST00000556374 RGSL1A5PLK6 1076 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 PDLIM1O00151 329 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 KCNK1O00180 336 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 TRIM38O00635 465 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 CASQ2O14958 399 aaPredicted RBP4.38□□□□□ -1.71
ATXN3-241ENST00000556374 CFLARO15519 480 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 HOXA3O43365 443 aaPredicted RBP4.38□□□□□ -1.71
ATXN3-241ENST00000556374 BUD23O43709 281 aaKnown RBP4.38□□□□□ -1.71
ATXN3-241ENST00000556374 ITM2AO43736 263 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 PQBP1O60828 265 aaKnown RBP4.38□□□□□ -1.71
ATXN3-241ENST00000556374 TADA2AO75478 443 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 GPC4O75487 556 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 KRT34O76011 436 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 TMCC1O94876 653 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 VAPBO95292 243 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 PIGNO95427 931 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 CLPTM1O96005 669 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 F2P00734 622 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 C1QAP02745 245 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 MMP3P08254 477 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 GAAP10253 952 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 CYBAP13498 195 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 GYPEP15421 78 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 STMN1P16949 149 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 ERCC2P18074 760 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 POU3F3P20264 500 aaPredicted RBP4.38□□□□□ -1.71
ATXN3-241ENST00000556374 IL4RP24394 825 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 PTX3P26022 381 aaPredicted RBP4.38□□□□□ -1.71
ATXN3-241ENST00000556374 PTPN3P26045 913 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 PCSK1P29120 753 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 HTR7P34969 479 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 CPOXP36551 454 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 MAGEA12P43365 314 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 ID4P47928 161 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 TKTL1P51854 596 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 ATXN1P54253 815 aaKnown RBP4.38□□□□□ -1.71
ATXN3-241ENST00000556374 RAB10P61026 200 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 ESRRGP62508 458 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 PHC1P78364 1004 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 MRPS22P82650 360 aaKnown RBP4.38□□□□□ -1.71
ATXN3-241ENST00000556374 ZNF33AQ06730 810 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 PPIDQ08752 370 aaKnown RBP4.38□□□□□ -1.71
ATXN3-241ENST00000556374 SCAPQ12770 1279 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 PPIGQ13427 754 aaKnown RBP eCLIP4.38□□□□□ -1.71
ATXN3-241ENST00000556374 TUBB3Q13509 450 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 LAMB3Q13751 1172 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 SQLEQ14534 574 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 PSMD5Q16401 504 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 GEN1Q17RS7 908 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 RAB6CQ53S08 254 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 OGFRL1Q5TC84 451 aaPredicted RBP4.38□□□□□ -1.71
ATXN3-241ENST00000556374 PIK3R6Q5UE93 754 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 MFSD14CQ5VZR4 134 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 ARMC3Q5W041 872 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 PRMT9Q6P2P2 845 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 EPGNQ6UW88 154 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 B3GNT6Q6ZMB0 384 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 FRMD7Q6ZUT3 714 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 TAS1R1Q7RTX1 841 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 PIWIL4Q7Z3Z4 852 aaKnown RBP4.38□□□□□ -1.71
ATXN3-241ENST00000556374 PIGZQ86VD9 579 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 METTL23Q86XA0 190 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 HPS6Q86YV9 775 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 AHI1Q8N157 1196 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 CRYBG2Q8N1P7 616 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 MARVELD2Q8N4S9 558 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 LINC01465Q8N7H1 131 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 CCNYL1Q8N7R7 359 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 CDYL2Q8N8U2 506 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 GPRC5AQ8NFJ5 357 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 TNIP2Q8NFZ5 429 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 MIPOL1Q8TD10 442 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 TRPC4APQ8TEL6 797 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms