RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 GPR42O15529 346 aa4.8□□□□□ -1.64
ATXN3-239ENST00000556315 HNRNPRO43390 633 aaKnown RBP4.8□□□□□ -1.64
ATXN3-239ENST00000556315 THAP12O43422 761 aa4.8□□□□□ -1.64
ATXN3-239ENST00000556315 BUB1O43683 1085 aa4.8□□□□□ -1.64
ATXN3-239ENST00000556315 KDELR3O43731 214 aa4.8□□□□□ -1.64
ATXN3-239ENST00000556315 KATNA1O75449 491 aa4.8□□□□□ -1.64
ATXN3-239ENST00000556315 DAB1O75553 588 aa4.8□□□□□ -1.64
ATXN3-239ENST00000556315 STK17BO94768 372 aa4.8□□□□□ -1.64
ATXN3-239ENST00000556315 IGSF6O95976 241 aa4.8□□□□□ -1.64
ATXN3-239ENST00000556315 LDLRP01130 860 aa4.8□□□□□ -1.64
ATXN3-239ENST00000556315 PCCBP05166 539 aa4.8□□□□□ -1.64
ATXN3-239ENST00000556315 PFKFB1P16118 471 aa4.8□□□□□ -1.64
ATXN3-239ENST00000556315 F8A1P23610 371 aa4.8□□□□□ -1.64
ATXN3-239ENST00000556315 DLSTP36957 453 aa4.8□□□□□ -1.64
ATXN3-239ENST00000556315 ACVRL1P37023 503 aa4.8□□□□□ -1.64
ATXN3-239ENST00000556315 SYKP43405 635 aa4.8□□□□□ -1.64
ATXN3-239ENST00000556315 LEPRP48357 1165 aaKnown RBP4.8□□□□□ -1.64
ATXN3-239ENST00000556315 PMS2P54278 862 aa4.8□□□□□ -1.64
ATXN3-239ENST00000556315 MANFP55145 182 aaKnown RBP4.8□□□□□ -1.64
ATXN3-239ENST00000556315 CD83Q01151 205 aa4.8□□□□□ -1.64
ATXN3-239ENST00000556315 DEUP1Q05D60 604 aa4.8□□□□□ -1.64
ATXN3-239ENST00000556315 ILF3Q12906 894 aaKnown RBP eCLIP4.8□□□□□ -1.64
ATXN3-239ENST00000556315 GRM3Q14832 879 aa4.8□□□□□ -1.64
ATXN3-239ENST00000556315 SLC25A52Q3SY17 297 aa4.8□□□□□ -1.64
ATXN3-239ENST00000556315 NADK2Q4G0N4 442 aa4.8□□□□□ -1.64
ATXN3-239ENST00000556315 INO80DQ53TQ3 878 aaPredicted RBP4.8□□□□□ -1.64
ATXN3-239ENST00000556315 ATXN7L2Q5T6C5 722 aaPredicted RBP4.8□□□□□ -1.64
ATXN3-239ENST00000556315 ATP1A1-AS1Q5TC04 95 aa4.8□□□□□ -1.64
ATXN3-239ENST00000556315 TMEM200BQ69YZ2 307 aa4.8□□□□□ -1.64
ATXN3-239ENST00000556315 ANKRD40Q6AI12 368 aa4.8□□□□□ -1.64
ATXN3-239ENST00000556315 CRIP3Q6Q6R5 217 aa4.8□□□□□ -1.64
ATXN3-239ENST00000556315 FAM183BPQ6ZVS7 135 aa4.8□□□□□ -1.64
ATXN3-239ENST00000556315 SLC26A9Q7LBE3 791 aa4.8□□□□□ -1.64
ATXN3-239ENST00000556315 NRROSQ86YC3 692 aa4.8□□□□□ -1.64
ATXN3-239ENST00000556315 ZDHHC17Q8IUH5 632 aa4.8□□□□□ -1.64
ATXN3-239ENST00000556315 REXO1L1PQ8IX06 675 aa4.8□□□□□ -1.64
ATXN3-239ENST00000556315 DRC7Q8IY82 874 aa4.8□□□□□ -1.64
ATXN3-239ENST00000556315 PLA2G15Q8NCC3 412 aa4.8□□□□□ -1.64
ATXN3-239ENST00000556315 OR10G6Q8NH81 332 aa4.8□□□□□ -1.64
ATXN3-239ENST00000556315 NT5C3BQ969T7 300 aa4.8□□□□□ -1.64
ATXN3-239ENST00000556315 C5orf34Q96MH7 638 aa4.8□□□□□ -1.64
ATXN3-239ENST00000556315 ZNF641Q96N77 438 aaPredicted RBP4.8□□□□□ -1.64
ATXN3-239ENST00000556315 CPXM1Q96SM3 734 aa4.8□□□□□ -1.64
ATXN3-239ENST00000556315 CTRCQ99895 268 aa4.8□□□□□ -1.64
ATXN3-239ENST00000556315 GTPBP4Q9BZE4 634 aaKnown RBP4.8□□□□□ -1.64
ATXN3-239ENST00000556315 PITHD1Q9GZP4 211 aaPredicted RBP4.8□□□□□ -1.64
ATXN3-239ENST00000556315 KLC2Q9H0B6 622 aa4.8□□□□□ -1.64
ATXN3-239ENST00000556315 MAGEH1Q9H213 219 aa4.8□□□□□ -1.64
ATXN3-239ENST00000556315 BARX1Q9HBU1 254 aaPredicted RBP4.8□□□□□ -1.64
ATXN3-239ENST00000556315 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.8□□□□□ -1.64
ATXN3-239ENST00000556315 TAAR2Q9P1P5 351 aa4.8□□□□□ -1.64
ATXN3-239ENST00000556315 Q9UFV3 132 aa4.8□□□□□ -1.64
ATXN3-239ENST00000556315 ERRFI1Q9UJM3 462 aaPredicted RBP4.8□□□□□ -1.64
ATXN3-239ENST00000556315 TRHDEQ9UKU6 1024 aa4.8□□□□□ -1.64
ATXN3-239ENST00000556315 PHTF1Q9UMS5 762 aa4.8□□□□□ -1.64
ATXN3-239ENST00000556315 HPSEQ9Y251 543 aa4.8□□□□□ -1.64
ATXN3-239ENST00000556315 SPEF1Q9Y4P9 236 aa4.8□□□□□ -1.64
ATXN3-239ENST00000556315 ANKRD17O75179 2603 aaKnown RBP4.8□□□□□ -1.64
ATXN3-239ENST00000556315 RP1P56715 2156 aa4.8□□□□□ -1.64
ATXN3-239ENST00000556315 KIF26BQ2KJY2 2108 aa4.79□□□□□ -1.64
ATXN3-239ENST00000556315 COL27A1Q8IZC6 1860 aaPredicted RBP4.79□□□□□ -1.64
ATXN3-239ENST00000556315 FAM237AA0A1B0GTK4 181 aa4.79□□□□□ -1.64
ATXN3-239ENST00000556315 TSPAN11A1L157 253 aa4.79□□□□□ -1.64
ATXN3-239ENST00000556315 PRSS38A1L453 326 aa4.79□□□□□ -1.64
ATXN3-239ENST00000556315 NPEPPSL1A6NEC2 478 aa4.79□□□□□ -1.64
ATXN3-239ENST00000556315 A8MU76 341 aa4.79□□□□□ -1.64
ATXN3-239ENST00000556315 TEX33O43247 280 aa4.79□□□□□ -1.64
ATXN3-239ENST00000556315 RAMP2O60895 175 aa4.79□□□□□ -1.64
ATXN3-239ENST00000556315 LRCH4O75427 683 aa4.79□□□□□ -1.64
ATXN3-239ENST00000556315 CREG1O75629 220 aa4.79□□□□□ -1.64
ATXN3-239ENST00000556315 RECQL5O94762 991 aaPredicted RBP4.79□□□□□ -1.64
ATXN3-239ENST00000556315 SORBS2O94875 1100 aaKnown RBP4.79□□□□□ -1.64
ATXN3-239ENST00000556315 TMCC1O94876 653 aa4.79□□□□□ -1.64
ATXN3-239ENST00000556315 KLHL18O94889 574 aa4.79□□□□□ -1.64
ATXN3-239ENST00000556315 ERBB2P04626 1255 aa4.79□□□□□ -1.64
ATXN3-239ENST00000556315 CSF2RBP32927 897 aa4.79□□□□□ -1.64
ATXN3-239ENST00000556315 ADCY8P40145 1251 aa4.79□□□□□ -1.64
ATXN3-239ENST00000556315 PRCPP42785 496 aa4.79□□□□□ -1.64
ATXN3-239ENST00000556315 PPM1FP49593 454 aaPredicted RBP4.79□□□□□ -1.64
ATXN3-239ENST00000556315 SULT1E1P49888 294 aa4.79□□□□□ -1.64
ATXN3-239ENST00000556315 PGDP52209 483 aa4.79□□□□□ -1.64
ATXN3-239ENST00000556315 SCAND1P57086 179 aa4.79□□□□□ -1.64
ATXN3-239ENST00000556315 RNASE9P60153 205 aaKnown RBP4.79□□□□□ -1.64
ATXN3-239ENST00000556315 RHOAP61586 193 aa4.79□□□□□ -1.64
ATXN3-239ENST00000556315 LRRC63Q05C16 580 aa4.79□□□□□ -1.64
ATXN3-239ENST00000556315 KLF1Q13351 362 aaPredicted RBP4.79□□□□□ -1.64
ATXN3-239ENST00000556315 MRPL49Q13405 166 aaKnown RBP4.79□□□□□ -1.64
ATXN3-239ENST00000556315 TOP3AQ13472 1001 aaPredicted RBP4.79□□□□□ -1.64
ATXN3-239ENST00000556315 SEMA5AQ13591 1074 aa4.79□□□□□ -1.64
ATXN3-239ENST00000556315 PDCD1Q15116 288 aa4.79□□□□□ -1.64
ATXN3-239ENST00000556315 UGT8Q16880 541 aa4.79□□□□□ -1.64
ATXN3-239ENST00000556315 COBLL1Q53SF7 1204 aa4.79□□□□□ -1.64
ATXN3-239ENST00000556315 CFAP58Q5T655 872 aa4.79□□□□□ -1.64
ATXN3-239ENST00000556315 OTUD1Q5VV17 481 aaPredicted RBP4.79□□□□□ -1.64
ATXN3-239ENST00000556315 PAPD7Q5XG87 772 aaKnown RBP4.79□□□□□ -1.64
ATXN3-239ENST00000556315 AFMIDQ63HM1 303 aa4.79□□□□□ -1.64
ATXN3-239ENST00000556315 PNCKQ6P2M8 343 aa4.79□□□□□ -1.64
ATXN3-239ENST00000556315 BRAT1Q6PJG6 821 aa4.79□□□□□ -1.64
ATXN3-239ENST00000556315 SLC30A9Q6PML9 568 aa4.79□□□□□ -1.64
ATXN3-239ENST00000556315 WDR74Q6RFH5 385 aaPredicted RBP4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms