RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 MBLAC2Q68D91 279 aa6.75□□□□□ -1.33
SLIRP-204ENST00000555890 CNSTQ6PJW8 725 aa6.75□□□□□ -1.33
SLIRP-204ENST00000555890 ZYG11AQ6WRX3 759 aa6.75□□□□□ -1.33
SLIRP-204ENST00000555890 TPRG1Q6ZUI0 275 aa6.75□□□□□ -1.33
SLIRP-204ENST00000555890 GET4Q7L5D6 327 aaPredicted RBP6.75□□□□□ -1.33
SLIRP-204ENST00000555890 TMEM25Q86YD3 366 aa6.75□□□□□ -1.33
SLIRP-204ENST00000555890 ARID3BQ8IVW6 561 aaPredicted RBP6.75□□□□□ -1.33
SLIRP-204ENST00000555890 WDR75Q8IWA0 830 aaKnown RBP6.75□□□□□ -1.33
SLIRP-204ENST00000555890 SCUBE1Q8IWY4 988 aa6.75□□□□□ -1.33
SLIRP-204ENST00000555890 PLD6Q8N2A8 252 aaKnown RBP6.75□□□□□ -1.33
SLIRP-204ENST00000555890 IL22RA1Q8N6P7 574 aa6.75□□□□□ -1.33
SLIRP-204ENST00000555890 PCDH20Q8N6Y1 951 aaKnown RBP6.75□□□□□ -1.33
SLIRP-204ENST00000555890 OR4K2Q8NGD2 314 aa6.75□□□□□ -1.33
SLIRP-204ENST00000555890 ITFG1Q8TB96 612 aa6.75□□□□□ -1.33
SLIRP-204ENST00000555890 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.75□□□□□ -1.33
SLIRP-204ENST00000555890 CCDC126Q96EE4 140 aa6.75□□□□□ -1.33
SLIRP-204ENST00000555890 THOC1Q96FV9 657 aaKnown RBP6.75□□□□□ -1.33
SLIRP-204ENST00000555890 LRRC37BQ96QE4 947 aa6.75□□□□□ -1.33
SLIRP-204ENST00000555890 TUBGCP5Q96RT8 1024 aa6.75□□□□□ -1.33
SLIRP-204ENST00000555890 TTC1Q99614 292 aa6.75□□□□□ -1.33
SLIRP-204ENST00000555890 MDFIQ99750 246 aa6.75□□□□□ -1.33
SLIRP-204ENST00000555890 OMDQ99983 421 aa6.75□□□□□ -1.33
SLIRP-204ENST00000555890 C19orf43Q9BQ61 176 aa6.75□□□□□ -1.33
SLIRP-204ENST00000555890 MRPL57Q9BQC6 102 aaKnown RBP6.75□□□□□ -1.33
SLIRP-204ENST00000555890 MECRQ9BV79 373 aa6.75□□□□□ -1.33
SLIRP-204ENST00000555890 GPR63Q9BZJ6 419 aa6.75□□□□□ -1.33
SLIRP-204ENST00000555890 CCDC68Q9H2F9 335 aa6.75□□□□□ -1.33
SLIRP-204ENST00000555890 POPDC3Q9HBV1 291 aa6.75□□□□□ -1.33
SLIRP-204ENST00000555890 HEBP1Q9NRV9 189 aa6.75□□□□□ -1.33
SLIRP-204ENST00000555890 DKK3Q9UBP4 350 aa6.75□□□□□ -1.33
SLIRP-204ENST00000555890 EVLQ9UI08 416 aaPredicted RBP6.75□□□□□ -1.33
SLIRP-204ENST00000555890 CDH7Q9ULB5 785 aa6.75□□□□□ -1.33
SLIRP-204ENST00000555890 CLEC4EQ9ULY5 219 aa6.75□□□□□ -1.33
SLIRP-204ENST00000555890 CCL26Q9Y258 94 aa6.75□□□□□ -1.33
SLIRP-204ENST00000555890 HS3ST2Q9Y278 367 aa6.75□□□□□ -1.33
SLIRP-204ENST00000555890 PKP3Q9Y446 797 aa6.75□□□□□ -1.33
SLIRP-204ENST00000555890 RP1L1Q8IWN7 2480 aaPredicted RBP6.75□□□□□ -1.33
SLIRP-204ENST00000555890 ABCA7Q8IZY2 2146 aa6.74□□□□□ -1.33
SLIRP-204ENST00000555890 TRBV23-1A0A0A0MS06 115 aa6.74□□□□□ -1.33
SLIRP-204ENST00000555890 A0A0G2JND7 137 aa6.74□□□□□ -1.33
SLIRP-204ENST00000555890 A0A1W2PQU0 124 aa6.74□□□□□ -1.33
SLIRP-204ENST00000555890 ANKRD34BA5PLL1 514 aa6.74□□□□□ -1.33
SLIRP-204ENST00000555890 OR51F1A6NGY5 319 aa6.74□□□□□ -1.33
SLIRP-204ENST00000555890 F8W8V4 182 aa6.74□□□□□ -1.33
SLIRP-204ENST00000555890 H7C0S8 307 aa6.74□□□□□ -1.33
SLIRP-204ENST00000555890 K7ERQ8 282 aa6.74□□□□□ -1.33
SLIRP-204ENST00000555890 CCL22O00626 93 aa6.74□□□□□ -1.33
SLIRP-204ENST00000555890 SUV39H1O43463 412 aa6.74□□□□□ -1.33
SLIRP-204ENST00000555890 SMAD6O43541 496 aaKnown RBP6.74□□□□□ -1.33
SLIRP-204ENST00000555890 SNNO75324 88 aaPredicted RBP6.74□□□□□ -1.33
SLIRP-204ENST00000555890 PEX14O75381 377 aa6.74□□□□□ -1.33
SLIRP-204ENST00000555890 SNUPNO95149 360 aaKnown RBP6.74□□□□□ -1.33
SLIRP-204ENST00000555890 PRAMEF12O95522 483 aa6.74□□□□□ -1.33
SLIRP-204ENST00000555890 POP4O95707 220 aaKnown RBP6.74□□□□□ -1.33
SLIRP-204ENST00000555890 PRKCGP05129 697 aa6.74□□□□□ -1.33
SLIRP-204ENST00000555890 ATP5BP06576 529 aaKnown RBP6.74□□□□□ -1.33
SLIRP-204ENST00000555890 PYGLP06737 847 aa6.74□□□□□ -1.33
SLIRP-204ENST00000555890 F7P08709 466 aaPredicted RBP6.74□□□□□ -1.33
SLIRP-204ENST00000555890 LTA4HP09960 611 aaKnown RBP6.74□□□□□ -1.33
SLIRP-204ENST00000555890 SLC35E2BP0CK96 405 aa6.74□□□□□ -1.33
SLIRP-204ENST00000555890 CHRNB1P11230 501 aa6.74□□□□□ -1.33
SLIRP-204ENST00000555890 FGF3P11487 239 aaPredicted RBP6.74□□□□□ -1.33
SLIRP-204ENST00000555890 SRCP12931 536 aa6.74□□□□□ -1.33
SLIRP-204ENST00000555890 CPEP16870 476 aa6.74□□□□□ -1.33
SLIRP-204ENST00000555890 CEBPBP17676 345 aa6.74□□□□□ -1.33
SLIRP-204ENST00000555890 POLR2EP19388 210 aaKnown RBP6.74□□□□□ -1.33
SLIRP-204ENST00000555890 NFKBIAP25963 317 aa6.74□□□□□ -1.33
SLIRP-204ENST00000555890 HLA-FP30511 346 aa6.74□□□□□ -1.33
SLIRP-204ENST00000555890 MC4RP32245 332 aa6.74□□□□□ -1.33
SLIRP-204ENST00000555890 TTPAP49638 278 aa6.74□□□□□ -1.33
SLIRP-204ENST00000555890 GSK3AP49840 483 aa6.74□□□□□ -1.33
SLIRP-204ENST00000555890 STC1P52823 247 aa6.74□□□□□ -1.33
SLIRP-204ENST00000555890 ABCE1P61221 599 aaKnown RBP6.74□□□□□ -1.33
SLIRP-204ENST00000555890 POLR2LP62875 67 aaKnown RBP6.74□□□□□ -1.33
SLIRP-204ENST00000555890 ECT2LQ008S8 904 aa6.74□□□□□ -1.33
SLIRP-204ENST00000555890 OCRLQ01968 901 aa6.74□□□□□ -1.33
SLIRP-204ENST00000555890 ZBTB16Q05516 673 aa6.74□□□□□ -1.33
SLIRP-204ENST00000555890 ACTN3Q08043 901 aaPredicted RBP6.74□□□□□ -1.33
SLIRP-204ENST00000555890 OVGP1Q12889 678 aa6.74□□□□□ -1.33
SLIRP-204ENST00000555890 ITGA9Q13797 1035 aa6.74□□□□□ -1.33
SLIRP-204ENST00000555890 PTPRCAPQ14761 206 aa6.74□□□□□ -1.33
SLIRP-204ENST00000555890 MYLK3Q32MK0 819 aa6.74□□□□□ -1.33
SLIRP-204ENST00000555890 FUT11Q495W5 492 aa6.74□□□□□ -1.33
SLIRP-204ENST00000555890 CARD16Q5EG05 197 aa6.74□□□□□ -1.33
SLIRP-204ENST00000555890 FAM209AQ5JX71 171 aa6.74□□□□□ -1.33
SLIRP-204ENST00000555890 DGKKQ5KSL6 1271 aa6.74□□□□□ -1.33
SLIRP-204ENST00000555890 SPDYAQ5MJ70 313 aa6.74□□□□□ -1.33
SLIRP-204ENST00000555890 LY6G5CQ5SRR4 150 aa6.74□□□□□ -1.33
SLIRP-204ENST00000555890 LRRC8EQ6NSJ5 796 aa6.74□□□□□ -1.33
SLIRP-204ENST00000555890 ZNF852Q6ZMS4 543 aa6.74□□□□□ -1.33
SLIRP-204ENST00000555890 CAMK1DQ8IU85 385 aa6.74□□□□□ -1.33
SLIRP-204ENST00000555890 C10orf107Q8IVU9 208 aa6.74□□□□□ -1.33
SLIRP-204ENST00000555890 CEP97Q8IW35 865 aa6.74□□□□□ -1.33
SLIRP-204ENST00000555890 ADGRG2Q8IZP9 1017 aa6.74□□□□□ -1.33
SLIRP-204ENST00000555890 AHI1Q8N157 1196 aa6.74□□□□□ -1.33
SLIRP-204ENST00000555890 TTC30BQ8N4P2 665 aa6.74□□□□□ -1.33
SLIRP-204ENST00000555890 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.74□□□□□ -1.33
SLIRP-204ENST00000555890 ACVR1CQ8NER5 493 aa6.74□□□□□ -1.33
SLIRP-204ENST00000555890 MDGA1Q8NFP4 955 aa6.74□□□□□ -1.33
SLIRP-204ENST00000555890 OR13C4Q8NGS5 318 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms