RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.18□□□□□ -1.58
CKS1BP1-201ENST00000555221 SPRY1O43609 319 aaPredicted RBP5.17□□□□□ -1.58
CKS1BP1-201ENST00000555221 TOMM70O94826 608 aa5.17□□□□□ -1.58
CKS1BP1-201ENST00000555221 SLCO2B1O94956 709 aa5.17□□□□□ -1.58
CKS1BP1-201ENST00000555221 C22orf31O95567 290 aa5.17□□□□□ -1.58
CKS1BP1-201ENST00000555221 H1F0P07305 194 aaKnown RBP5.17□□□□□ -1.58
CKS1BP1-201ENST00000555221 CSF2RAP15509 400 aa5.17□□□□□ -1.58
CKS1BP1-201ENST00000555221 SP100P23497 879 aaPredicted RBP5.17□□□□□ -1.58
CKS1BP1-201ENST00000555221 MCCP23508 829 aa5.17□□□□□ -1.58
CKS1BP1-201ENST00000555221 CCR10P46092 362 aa5.17□□□□□ -1.58
CKS1BP1-201ENST00000555221 FOXG1P55316 489 aaPredicted RBP5.17□□□□□ -1.58
CKS1BP1-201ENST00000555221 KEAP1Q14145 624 aa5.17□□□□□ -1.58
CKS1BP1-201ENST00000555221 HYAL4Q2M3T9 481 aa5.17□□□□□ -1.58
CKS1BP1-201ENST00000555221 PLA2G4FQ68DD2 849 aa5.17□□□□□ -1.58
CKS1BP1-201ENST00000555221 FAM171BQ6P995 826 aa5.17□□□□□ -1.58
CKS1BP1-201ENST00000555221 PACS1Q6VY07 963 aa5.17□□□□□ -1.58
CKS1BP1-201ENST00000555221 C16orf82Q7Z2V1 217 aa5.17□□□□□ -1.58
CKS1BP1-201ENST00000555221 PTOV1Q86YD1 416 aa5.17□□□□□ -1.58
CKS1BP1-201ENST00000555221 MFN1Q8IWA4 741 aa5.17□□□□□ -1.58
CKS1BP1-201ENST00000555221 SAMD14Q8IZD0 417 aaPredicted RBP5.17□□□□□ -1.58
CKS1BP1-201ENST00000555221 CAMKVQ8NCB2 501 aa5.17□□□□□ -1.58
CKS1BP1-201ENST00000555221 NUDCD2Q8WVJ2 157 aa5.17□□□□□ -1.58
CKS1BP1-201ENST00000555221 SPDL1Q96EA4 605 aa5.17□□□□□ -1.58
CKS1BP1-201ENST00000555221 IGSF21Q96ID5 467 aa5.17□□□□□ -1.58
CKS1BP1-201ENST00000555221 MARK4Q96L34 752 aa5.17□□□□□ -1.58
CKS1BP1-201ENST00000555221 FER1L6-AS2Q96M78 137 aa5.17□□□□□ -1.58
CKS1BP1-201ENST00000555221 TTC14Q96N46 770 aa5.17□□□□□ -1.58
CKS1BP1-201ENST00000555221 HIPK2Q9H2X6 1198 aa5.17□□□□□ -1.58
CKS1BP1-201ENST00000555221 TBC1D17Q9HA65 648 aa5.17□□□□□ -1.58
CKS1BP1-201ENST00000555221 A0A0G2JNG1 304 aa5.16□□□□□ -1.58
CKS1BP1-201ENST00000555221 PLSCR5A0PG75 271 aa5.16□□□□□ -1.58
CKS1BP1-201ENST00000555221 ASPDHA6ND91 283 aa5.16□□□□□ -1.58
CKS1BP1-201ENST00000555221 CELF2O95319 508 aaKnown RBP5.16□□□□□ -1.58
CKS1BP1-201ENST00000555221 TFAP2AP05549 437 aa5.16□□□□□ -1.58
CKS1BP1-201ENST00000555221 HSP90AB1P08238 724 aaKnown RBP5.16□□□□□ -1.58
CKS1BP1-201ENST00000555221 KRT19P08727 400 aa5.16□□□□□ -1.58
CKS1BP1-201ENST00000555221 ACHEP22303 614 aa5.16□□□□□ -1.58
CKS1BP1-201ENST00000555221 PSMC4P43686 418 aa5.16□□□□□ -1.58
CKS1BP1-201ENST00000555221 MMP15P51511 669 aa5.16□□□□□ -1.58
CKS1BP1-201ENST00000555221 IRX6P78412 446 aaPredicted RBP5.16□□□□□ -1.58
CKS1BP1-201ENST00000555221 KIR2DS5Q14953 304 aa5.16□□□□□ -1.58
CKS1BP1-201ENST00000555221 DUOXA1Q1HG43 343 aa5.16□□□□□ -1.58
CKS1BP1-201ENST00000555221 VWC2Q2TAL6 325 aa5.16□□□□□ -1.58
CKS1BP1-201ENST00000555221 NDUFAF5Q5TEU4 345 aa5.16□□□□□ -1.58
CKS1BP1-201ENST00000555221 TMPRSS11FQ6ZWK6 438 aa5.16□□□□□ -1.58
CKS1BP1-201ENST00000555221 TUBA1AQ71U36 451 aa5.16□□□□□ -1.58
CKS1BP1-201ENST00000555221 MEPCEQ7L2J0 689 aaKnown RBP5.16□□□□□ -1.58
CKS1BP1-201ENST00000555221 GALNTL5Q7Z4T8 443 aa5.16□□□□□ -1.58
CKS1BP1-201ENST00000555221 LONP2Q86WA8 852 aa5.16□□□□□ -1.58
CKS1BP1-201ENST00000555221 ZDHHC17Q8IUH5 632 aa5.16□□□□□ -1.58
CKS1BP1-201ENST00000555221 DCP1BQ8IZD4 617 aaKnown RBP5.16□□□□□ -1.58
CKS1BP1-201ENST00000555221 L3MBTL4Q8NA19 623 aa5.16□□□□□ -1.58
CKS1BP1-201ENST00000555221 Q8NFD4 153 aa5.16□□□□□ -1.58
CKS1BP1-201ENST00000555221 ZFAND2BQ8WV99 257 aa5.16□□□□□ -1.58
CKS1BP1-201ENST00000555221 DAZLQ92904 295 aaKnown RBP5.16□□□□□ -1.58
CKS1BP1-201ENST00000555221 LINGO1Q96FE5 620 aa5.16□□□□□ -1.58
CKS1BP1-201ENST00000555221 SFXN2Q96NB2 322 aa5.16□□□□□ -1.58
CKS1BP1-201ENST00000555221 IL17FQ96PD4 163 aa5.16□□□□□ -1.58
CKS1BP1-201ENST00000555221 TUBA1CQ9BQE3 449 aa5.16□□□□□ -1.58
CKS1BP1-201ENST00000555221 WACQ9BTA9 647 aa5.16□□□□□ -1.58
CKS1BP1-201ENST00000555221 DDX31Q9H8H2 851 aaKnown RBP5.16□□□□□ -1.58
CKS1BP1-201ENST00000555221 ZWILCHQ9H900 591 aa5.16□□□□□ -1.58
CKS1BP1-201ENST00000555221 TRPC7Q9HCX4 862 aa5.16□□□□□ -1.58
CKS1BP1-201ENST00000555221 MBNL1Q9NR56 388 aaKnown RBP5.16□□□□□ -1.58
CKS1BP1-201ENST00000555221 MEIS2O14770 477 aa5.15□□□□□ -1.59
CKS1BP1-201ENST00000555221 GCNT3O95395 438 aa5.15□□□□□ -1.59
CKS1BP1-201ENST00000555221 PPP1R3DO95685 299 aa5.15□□□□□ -1.59
CKS1BP1-201ENST00000555221 LIPFP07098 398 aa5.15□□□□□ -1.59
CKS1BP1-201ENST00000555221 RAB40ALP0C0E4 278 aa5.15□□□□□ -1.59
CKS1BP1-201ENST00000555221 IFNAR1P17181 557 aa5.15□□□□□ -1.59
CKS1BP1-201ENST00000555221 TNFRSF8P28908 595 aa5.15□□□□□ -1.59
CKS1BP1-201ENST00000555221 HSPA4P34932 840 aa5.15□□□□□ -1.59
CKS1BP1-201ENST00000555221 LIMK1P53667 647 aa5.15□□□□□ -1.59
CKS1BP1-201ENST00000555221 PRKCZQ05513 592 aa5.15□□□□□ -1.59
CKS1BP1-201ENST00000555221 RBPJQ06330 500 aa5.15□□□□□ -1.59
CKS1BP1-201ENST00000555221 PNRC1Q12796 327 aaPredicted RBP5.15□□□□□ -1.59
CKS1BP1-201ENST00000555221 GAGE5Q13069 117 aa5.15□□□□□ -1.59
CKS1BP1-201ENST00000555221 GAGE6Q13070 117 aa5.15□□□□□ -1.59
CKS1BP1-201ENST00000555221 KLHL26Q53HC5 615 aa5.15□□□□□ -1.59
CKS1BP1-201ENST00000555221 HECTD3Q5T447 861 aa5.15□□□□□ -1.59
CKS1BP1-201ENST00000555221 C9orf57Q5W0N0 161 aa5.15□□□□□ -1.59
CKS1BP1-201ENST00000555221 PLXDC2Q6UX71 529 aa5.15□□□□□ -1.59
CKS1BP1-201ENST00000555221 ARMC9Q7Z3E5 817 aa5.15□□□□□ -1.59
CKS1BP1-201ENST00000555221 ADCK2Q7Z695 626 aa5.15□□□□□ -1.59
CKS1BP1-201ENST00000555221 METTL23Q86XA0 190 aa5.15□□□□□ -1.59
CKS1BP1-201ENST00000555221 IQUBQ8NA54 791 aa5.15□□□□□ -1.59
CKS1BP1-201ENST00000555221 SECTM1Q8WVN6 248 aa5.15□□□□□ -1.59
CKS1BP1-201ENST00000555221 ROBO4Q8WZ75 1007 aa5.15□□□□□ -1.59
CKS1BP1-201ENST00000555221 LRRC3BQ96PB8 259 aa5.15□□□□□ -1.59
CKS1BP1-201ENST00000555221 EGFL8Q99944 293 aa5.15□□□□□ -1.59
CKS1BP1-201ENST00000555221 ADPGKQ9BRR6 497 aa5.15□□□□□ -1.59
CKS1BP1-201ENST00000555221 BTBD10Q9BSF8 475 aa5.15□□□□□ -1.59
CKS1BP1-201ENST00000555221 LRRC1Q9BTT6 524 aa5.15□□□□□ -1.59
CKS1BP1-201ENST00000555221 KRTAP4-5Q9BYR2 181 aa5.15□□□□□ -1.59
CKS1BP1-201ENST00000555221 ST6GALNAC4Q9H4F1 302 aa5.15□□□□□ -1.59
CKS1BP1-201ENST00000555221 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.15□□□□□ -1.59
CKS1BP1-201ENST00000555221 SPIN1Q9Y657 262 aaPredicted RBP5.15□□□□□ -1.59
CKS1BP1-201ENST00000555221 A0A1W2PPM1 405 aa5.14□□□□□ -1.59
CKS1BP1-201ENST00000555221 CTAGE9A4FU28 777 aa5.14□□□□□ -1.59
CKS1BP1-201ENST00000555221 PRR32B1ATL7 298 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms