RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 AKAP7Q9P0M2 348 aaPredicted RBP10.38□□□□□ -0.75
TMEM260-206ENST00000555046 CLCA2Q9UQC9 943 aa10.38□□□□□ -0.75
TMEM260-206ENST00000555046 ST14Q9Y5Y6 855 aa10.38□□□□□ -0.75
TMEM260-206ENST00000555046 TEX264Q9Y6I9 313 aa10.38□□□□□ -0.75
TMEM260-206ENST00000555046 RNF215Q9Y6U7 377 aa10.38□□□□□ -0.75
TMEM260-206ENST00000555046 U3KQA8 63 aa10.38□□□□□ -0.75
TMEM260-206ENST00000555046 PLXNA2O75051 1894 aa10.38□□□□□ -0.75
TMEM260-206ENST00000555046 KNTC1P50748 2209 aa10.37□□□□□ -0.75
TMEM260-206ENST00000555046 UBA6A0AVT1 1052 aaPredicted RBP10.37□□□□□ -0.75
TMEM260-206ENST00000555046 PRR19A6NJB7 356 aa10.37□□□□□ -0.75
TMEM260-206ENST00000555046 ESPNB1AK53 854 aa10.37□□□□□ -0.75
TMEM260-206ENST00000555046 E5RI56 91 aa10.37□□□□□ -0.75
TMEM260-206ENST00000555046 TK2O00142 265 aa10.37□□□□□ -0.75
TMEM260-206ENST00000555046 PPM1DO15297 605 aa10.37□□□□□ -0.75
TMEM260-206ENST00000555046 SGTAO43765 313 aa10.37□□□□□ -0.75
TMEM260-206ENST00000555046 OR1I1O60431 355 aa10.37□□□□□ -0.75
TMEM260-206ENST00000555046 SPAG6O75602 509 aa10.37□□□□□ -0.75
TMEM260-206ENST00000555046 RPN2P04844 631 aa10.37□□□□□ -0.75
TMEM260-206ENST00000555046 MYF5P13349 255 aa10.37□□□□□ -0.75
TMEM260-206ENST00000555046 CHRM3P20309 590 aa10.37□□□□□ -0.75
TMEM260-206ENST00000555046 ARNTP27540 789 aa10.37□□□□□ -0.75
TMEM260-206ENST00000555046 PBLDP30039 288 aaPredicted RBP10.37□□□□□ -0.75
TMEM260-206ENST00000555046 CA5AP35218 305 aa10.37□□□□□ -0.75
TMEM260-206ENST00000555046 SKIV2L2P42285 1042 aaKnown RBP10.37□□□□□ -0.75
TMEM260-206ENST00000555046 PPM1FP49593 454 aaPredicted RBP10.37□□□□□ -0.75
TMEM260-206ENST00000555046 MAZP56270 477 aaKnown RBP10.37□□□□□ -0.75
TMEM260-206ENST00000555046 MRPS25P82663 173 aaKnown RBP10.37□□□□□ -0.75
TMEM260-206ENST00000555046 INSM1Q01101 510 aaPredicted RBP10.37□□□□□ -0.75
TMEM260-206ENST00000555046 CRYMQ14894 314 aa10.37□□□□□ -0.75
TMEM260-206ENST00000555046 SEPT7Q16181 437 aaKnown RBP10.37□□□□□ -0.75
TMEM260-206ENST00000555046 KCTD19Q17RG1 926 aaPredicted RBP10.37□□□□□ -0.75
TMEM260-206ENST00000555046 MSS51Q4VC12 460 aa10.37□□□□□ -0.75
TMEM260-206ENST00000555046 SYTL3Q4VX76 610 aa10.37□□□□□ -0.75
TMEM260-206ENST00000555046 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.37□□□□□ -0.75
TMEM260-206ENST00000555046 ZNF470Q6ECI4 717 aa10.37□□□□□ -0.75
TMEM260-206ENST00000555046 TTC23LQ6PF05 361 aa10.37□□□□□ -0.75
TMEM260-206ENST00000555046 OTOAQ7RTW8 1153 aa10.37□□□□□ -0.75
TMEM260-206ENST00000555046 GALNT7Q86SF2 657 aa10.37□□□□□ -0.75
TMEM260-206ENST00000555046 IFT20Q8IY31 132 aa10.37□□□□□ -0.75
TMEM260-206ENST00000555046 ZBED8Q8IZ13 594 aa10.37□□□□□ -0.75
TMEM260-206ENST00000555046 Q8N9G6 341 aaPredicted RBP10.37□□□□□ -0.75
TMEM260-206ENST00000555046 FBXO36Q8NEA4 188 aa10.37□□□□□ -0.75
TMEM260-206ENST00000555046 SLC37A2Q8TED4 501 aa10.37□□□□□ -0.75
TMEM260-206ENST00000555046 SEC14L1Q92503 715 aa10.37□□□□□ -0.75
TMEM260-206ENST00000555046 C12orf66Q96MD2 445 aa10.37□□□□□ -0.75
TMEM260-206ENST00000555046 STRADBQ9C0K7 418 aa10.37□□□□□ -0.75
TMEM260-206ENST00000555046 MVB12BQ9H7P6 319 aa10.37□□□□□ -0.75
TMEM260-206ENST00000555046 CAAP1Q9H8G2 361 aa10.37□□□□□ -0.75
TMEM260-206ENST00000555046 SLC40A1Q9NP59 571 aa10.37□□□□□ -0.75
TMEM260-206ENST00000555046 KLHL42Q9P2K6 505 aa10.37□□□□□ -0.75
TMEM260-206ENST00000555046 FBXO5Q9UKT4 447 aa10.37□□□□□ -0.75
TMEM260-206ENST00000555046 PCYT1BQ9Y5K3 369 aaPredicted RBP10.37□□□□□ -0.75
TMEM260-206ENST00000555046 FBN2P35556 2912 aa10.37□□□□□ -0.75
TMEM260-206ENST00000555046 GOLGA4Q13439 2230 aaKnown RBP10.36□□□□□ -0.75
TMEM260-206ENST00000555046 LILRA5A6NI73 299 aa10.36□□□□□ -0.75
TMEM260-206ENST00000555046 GOLGA8KD6RF30 607 aa10.36□□□□□ -0.75
TMEM260-206ENST00000555046 GOLGA8TH3BQL2 631 aa10.36□□□□□ -0.75
TMEM260-206ENST00000555046 NTN3O00634 580 aaPredicted RBP10.36□□□□□ -0.75
TMEM260-206ENST00000555046 DUX1O43812 170 aa10.36□□□□□ -0.75
TMEM260-206ENST00000555046 CPNE6O95741 557 aa10.36□□□□□ -0.75
TMEM260-206ENST00000555046 S1PR4O95977 384 aa10.36□□□□□ -0.75
TMEM260-206ENST00000555046 RPLP0P05388 317 aaKnown RBP10.36□□□□□ -0.75
TMEM260-206ENST00000555046 PRSS56P0CW18 603 aa10.36□□□□□ -0.75
TMEM260-206ENST00000555046 AMD1P17707 334 aa10.36□□□□□ -0.75
TMEM260-206ENST00000555046 FMO4P31512 558 aa10.36□□□□□ -0.75
TMEM260-206ENST00000555046 SLC19A1P41440 591 aa10.36□□□□□ -0.75
TMEM260-206ENST00000555046 MAPK9P45984 424 aa10.36□□□□□ -0.75
TMEM260-206ENST00000555046 LEPRP48357 1165 aaKnown RBP10.36□□□□□ -0.75
TMEM260-206ENST00000555046 EIF3BP55884 814 aaKnown RBP10.36□□□□□ -0.75
TMEM260-206ENST00000555046 UBE2IP63279 158 aaKnown RBP10.36□□□□□ -0.75
TMEM260-206ENST00000555046 CCL7P80098 99 aa10.36□□□□□ -0.75
TMEM260-206ENST00000555046 SLC7A5Q01650 507 aa10.36□□□□□ -0.75
TMEM260-206ENST00000555046 MGAT5Q09328 741 aa10.36□□□□□ -0.75
TMEM260-206ENST00000555046 CUL1Q13616 776 aa10.36□□□□□ -0.75
TMEM260-206ENST00000555046 CLCA4Q14CN2 919 aa10.36□□□□□ -0.75
TMEM260-206ENST00000555046 RPE65Q16518 533 aa10.36□□□□□ -0.75
TMEM260-206ENST00000555046 TTLL9Q3SXZ7 439 aa10.36□□□□□ -0.75
TMEM260-206ENST00000555046 AMZ1Q400G9 498 aa10.36□□□□□ -0.75
TMEM260-206ENST00000555046 HSP90AA5PQ58FG0 334 aa10.36□□□□□ -0.75
TMEM260-206ENST00000555046 PERM1Q5SV97 790 aa10.36□□□□□ -0.75
TMEM260-206ENST00000555046 PLEKHS1Q5SXH7 462 aa10.36□□□□□ -0.75
TMEM260-206ENST00000555046 HES3Q5TGS1 186 aa10.36□□□□□ -0.75
TMEM260-206ENST00000555046 CDCP2Q5VXM1 449 aa10.36□□□□□ -0.75
TMEM260-206ENST00000555046 STEAP4Q687X5 459 aa10.36□□□□□ -0.75
TMEM260-206ENST00000555046 CAPRIN2Q6IMN6 1127 aaKnown RBP10.36□□□□□ -0.75
TMEM260-206ENST00000555046 UNC5AQ6ZN44 842 aa10.36□□□□□ -0.75
TMEM260-206ENST00000555046 C3orf62Q6ZUJ4 267 aa10.36□□□□□ -0.75
TMEM260-206ENST00000555046 TMEM26Q6ZUK4 368 aa10.36□□□□□ -0.75
TMEM260-206ENST00000555046 SPRED1Q7Z699 444 aa10.36□□□□□ -0.75
TMEM260-206ENST00000555046 LDB1Q86U70 411 aaPredicted RBP10.36□□□□□ -0.75
TMEM260-206ENST00000555046 PLXDC1Q8IUK5 500 aa10.36□□□□□ -0.75
TMEM260-206ENST00000555046 LSMEM2Q8N112 164 aa10.36□□□□□ -0.75
TMEM260-206ENST00000555046 DCBLD1Q8N8Z6 715 aa10.36□□□□□ -0.75
TMEM260-206ENST00000555046 MAGEC3Q8TD91 643 aa10.36□□□□□ -0.75
TMEM260-206ENST00000555046 LPGAT1Q92604 370 aa10.36□□□□□ -0.75
TMEM260-206ENST00000555046 TFGQ92734 400 aaPredicted RBP10.36□□□□□ -0.75
TMEM260-206ENST00000555046 CERS2Q96G23 380 aa10.36□□□□□ -0.75
TMEM260-206ENST00000555046 CFAP36Q96G28 342 aa10.36□□□□□ -0.75
TMEM260-206ENST00000555046 FOPNLQ96NB1 174 aa10.36□□□□□ -0.75
TMEM260-206ENST00000555046 P2RY12Q9H244 342 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms