RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 SLC26A3P40879 764 aa16.09■□□□□ 0.17
SPTLC2-203ENST00000554901 SERPINB8P50452 374 aa16.09■□□□□ 0.17
SPTLC2-203ENST00000554901 KIR2DS5Q14953 304 aa16.09■□□□□ 0.17
SPTLC2-203ENST00000554901 CAPRIN2Q6IMN6 1127 aaKnown RBP16.09■□□□□ 0.17
SPTLC2-203ENST00000554901 IYDQ6PHW0 289 aa16.09■□□□□ 0.17
SPTLC2-203ENST00000554901 TIFABQ6ZNK6 161 aa16.09■□□□□ 0.17
SPTLC2-203ENST00000554901 PDZD3Q86UT5 571 aa16.09■□□□□ 0.17
SPTLC2-203ENST00000554901 GATAD2AQ86YP4 633 aa16.09■□□□□ 0.17
SPTLC2-203ENST00000554901 NKAPQ8N5F7 415 aaKnown RBP16.09■□□□□ 0.17
SPTLC2-203ENST00000554901 LILRA3Q8N6C8 439 aaPredicted RBP16.09■□□□□ 0.17
SPTLC2-203ENST00000554901 SIDT2Q8NBJ9 832 aaKnown RBP16.09■□□□□ 0.17
SPTLC2-203ENST00000554901 GIMAP7Q8NHV1 300 aa16.09■□□□□ 0.17
SPTLC2-203ENST00000554901 ZDHHC1Q8WTX9 485 aa16.09■□□□□ 0.17
SPTLC2-203ENST00000554901 PDLIM5Q96HC4 596 aaKnown RBP16.09■□□□□ 0.17
SPTLC2-203ENST00000554901 PKNOX2Q96KN3 472 aa16.09■□□□□ 0.17
SPTLC2-203ENST00000554901 GPAMQ9HCL2 828 aa16.09■□□□□ 0.17
SPTLC2-203ENST00000554901 RXFP3Q9NSD7 469 aa16.09■□□□□ 0.17
SPTLC2-203ENST00000554901 EURLQ9NYK6 297 aa16.09■□□□□ 0.17
SPTLC2-203ENST00000554901 GALPQ9UBC7 116 aa16.09■□□□□ 0.17
SPTLC2-203ENST00000554901 FAM8A1Q9UBU6 413 aa16.09■□□□□ 0.17
SPTLC2-203ENST00000554901 FAM186AA6NE01 2351 aa16.09■□□□□ 0.17
SPTLC2-203ENST00000554901 GVINP1Q7Z2Y8 2422 aa16.09■□□□□ 0.17
SPTLC2-203ENST00000554901 GFRA3O60609 400 aa16.09■□□□□ 0.17
SPTLC2-203ENST00000554901 SNX2O60749 519 aa16.09■□□□□ 0.17
SPTLC2-203ENST00000554901 ZNF37AP17032 561 aaPredicted RBP16.09■□□□□ 0.17
SPTLC2-203ENST00000554901 CSRP3P50461 194 aa16.09■□□□□ 0.17
SPTLC2-203ENST00000554901 IL2P60568 153 aa16.09■□□□□ 0.17
SPTLC2-203ENST00000554901 DEFB133Q30KQ1 61 aa16.09■□□□□ 0.17
SPTLC2-203ENST00000554901 FBXO38Q6PIJ6 1188 aa16.09■□□□□ 0.17
SPTLC2-203ENST00000554901 PAQR3Q6TCH7 311 aa16.09■□□□□ 0.17
SPTLC2-203ENST00000554901 C17orf82Q86X59 251 aaPredicted RBP16.09■□□□□ 0.17
SPTLC2-203ENST00000554901 SFRP1Q8N474 314 aa16.09■□□□□ 0.17
SPTLC2-203ENST00000554901 ACVR1CQ8NER5 493 aa16.09■□□□□ 0.17
SPTLC2-203ENST00000554901 ANKRD7Q92527 254 aa16.09■□□□□ 0.17
SPTLC2-203ENST00000554901 FAM136AQ96C01 138 aa16.09■□□□□ 0.17
SPTLC2-203ENST00000554901 SLC30A3Q99726 388 aa16.09■□□□□ 0.17
SPTLC2-203ENST00000554901 CAAP1Q9H8G2 361 aa16.09■□□□□ 0.17
SPTLC2-203ENST00000554901 PRDM8Q9NQV8 689 aa16.09■□□□□ 0.17
SPTLC2-203ENST00000554901 HEBP2Q9Y5Z4 205 aa16.09■□□□□ 0.17
SPTLC2-203ENST00000554901 TDRD6O60522 2096 aaKnown RBP16.08■□□□□ 0.17
SPTLC2-203ENST00000554901 ALDOAP04075 364 aaKnown RBP16.08■□□□□ 0.16
SPTLC2-203ENST00000554901 MPC1LP0DKB6 136 aa16.08■□□□□ 0.16
SPTLC2-203ENST00000554901 BRAFP15056 766 aa16.08■□□□□ 0.16
SPTLC2-203ENST00000554901 XRCC1P18887 633 aaPredicted RBP16.08■□□□□ 0.16
SPTLC2-203ENST00000554901 SAT1P21673 171 aa16.08■□□□□ 0.16
SPTLC2-203ENST00000554901 RPL10P27635 214 aaKnown RBP16.08■□□□□ 0.16
SPTLC2-203ENST00000554901 ACADLP28330 430 aa16.08■□□□□ 0.16
SPTLC2-203ENST00000554901 NDUFS1P28331 727 aa16.08■□□□□ 0.16
SPTLC2-203ENST00000554901 PDHA2P29803 388 aa16.08■□□□□ 0.16
SPTLC2-203ENST00000554901 MAGEA12P43365 314 aa16.08■□□□□ 0.16
SPTLC2-203ENST00000554901 PREPP48147 710 aa16.08■□□□□ 0.16
SPTLC2-203ENST00000554901 BMPR2Q13873 1038 aa16.08■□□□□ 0.16
SPTLC2-203ENST00000554901 CASP8Q14790 479 aa16.08■□□□□ 0.16
SPTLC2-203ENST00000554901 TCEA2Q15560 299 aa16.08■□□□□ 0.16
SPTLC2-203ENST00000554901 ACSBG2Q5FVE4 666 aa16.08■□□□□ 0.16
SPTLC2-203ENST00000554901 PIM3Q86V86 326 aa16.08■□□□□ 0.16
SPTLC2-203ENST00000554901 CEP97Q8IW35 865 aa16.08■□□□□ 0.16
SPTLC2-203ENST00000554901 RBM12BQ8IXT5 1001 aaKnown RBP16.08■□□□□ 0.16
SPTLC2-203ENST00000554901 NAGSQ8N159 534 aa16.08■□□□□ 0.16
SPTLC2-203ENST00000554901 ARL10Q8N8L6 244 aa16.08■□□□□ 0.16
SPTLC2-203ENST00000554901 GPR156Q8NFN8 814 aa16.08■□□□□ 0.16
SPTLC2-203ENST00000554901 OR6C4Q8NGE1 309 aa16.08■□□□□ 0.16
SPTLC2-203ENST00000554901 OR2W6PQ8NHA6 318 aa16.08■□□□□ 0.16
SPTLC2-203ENST00000554901 EPS8L3Q8TE67 593 aaKnown RBP16.08■□□□□ 0.16
SPTLC2-203ENST00000554901 ZFPM2Q8WW38 1151 aa16.08■□□□□ 0.16
SPTLC2-203ENST00000554901 WWP1Q9H0M0 922 aa16.08■□□□□ 0.16
SPTLC2-203ENST00000554901 SNX15Q9NRS6 342 aa16.08■□□□□ 0.16
SPTLC2-203ENST00000554901 EVA1BQ9NVM1 165 aa16.08■□□□□ 0.16
SPTLC2-203ENST00000554901 LGALS13Q9UHV8 139 aa16.08■□□□□ 0.16
SPTLC2-203ENST00000554901 ZFC3H1O60293 1989 aaKnown RBP16.07■□□□□ 0.16
SPTLC2-203ENST00000554901 C4orf47A7E2U8 309 aa16.07■□□□□ 0.16
SPTLC2-203ENST00000554901 TRIM49D1C9J1S8 452 aa16.07■□□□□ 0.16
SPTLC2-203ENST00000554901 FFAR2O15552 330 aa16.07■□□□□ 0.16
SPTLC2-203ENST00000554901 NOBOXO60393 691 aa16.07■□□□□ 0.16
SPTLC2-203ENST00000554901 WISP3O95389 354 aaPredicted RBP16.07■□□□□ 0.16
SPTLC2-203ENST00000554901 RPN2P04844 631 aa16.07■□□□□ 0.16
SPTLC2-203ENST00000554901 CD59P13987 128 aa16.07■□□□□ 0.16
SPTLC2-203ENST00000554901 TYK2P29597 1187 aa16.07■□□□□ 0.16
SPTLC2-203ENST00000554901 RPIAP49247 311 aa16.07■□□□□ 0.16
SPTLC2-203ENST00000554901 TAF1BQ53T94 588 aaPredicted RBP16.07■□□□□ 0.16
SPTLC2-203ENST00000554901 STPG1Q5TH74 334 aa16.07■□□□□ 0.16
SPTLC2-203ENST00000554901 UNC5DQ6UXZ4 953 aa16.07■□□□□ 0.16
SPTLC2-203ENST00000554901 NAPRTQ6XQN6 538 aa16.07■□□□□ 0.16
SPTLC2-203ENST00000554901 CPNE9Q8IYJ1 553 aa16.07■□□□□ 0.16
SPTLC2-203ENST00000554901 ACMSDQ8TDX5 336 aa16.07■□□□□ 0.16
SPTLC2-203ENST00000554901 TFGQ92734 400 aaPredicted RBP16.07■□□□□ 0.16
SPTLC2-203ENST00000554901 CABS1Q96KC9 395 aa16.07■□□□□ 0.16
SPTLC2-203ENST00000554901 RMDN2Q96LZ7 410 aa16.07■□□□□ 0.16
SPTLC2-203ENST00000554901 FOPNLQ96NB1 174 aa16.07■□□□□ 0.16
SPTLC2-203ENST00000554901 STN1Q9H668 368 aaKnown RBP16.07■□□□□ 0.16
SPTLC2-203ENST00000554901 CAB39LQ9H9S4 337 aa16.07■□□□□ 0.16
SPTLC2-203ENST00000554901 POT1Q9NUX5 634 aa16.07■□□□□ 0.16
SPTLC2-203ENST00000554901 TLK1Q9UKI8 766 aa16.07■□□□□ 0.16
SPTLC2-203ENST00000554901 WDR37Q9Y2I8 494 aa16.07■□□□□ 0.16
SPTLC2-203ENST00000554901 A0A087X1B8 175 aa16.06■□□□□ 0.16
SPTLC2-203ENST00000554901 CCDC189A1A4V9 331 aa16.06■□□□□ 0.16
SPTLC2-203ENST00000554901 B4DGG1 531 aa16.06■□□□□ 0.16
SPTLC2-203ENST00000554901 TRIM38O00635 465 aa16.06■□□□□ 0.16
SPTLC2-203ENST00000554901 MATN4O95460 622 aa16.06■□□□□ 0.16
SPTLC2-203ENST00000554901 EML2O95834 649 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms