RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 IFI44LQ53G44 452 aa13.76□□□□□ -0.21
VTI1B-204ENST00000554659 PITRM1Q5JRX3 1037 aa13.76□□□□□ -0.21
VTI1B-204ENST00000554659 CHST15Q7LFX5 561 aaPredicted RBP13.76□□□□□ -0.21
VTI1B-204ENST00000554659 SERPINA9Q86WD7 417 aa13.76□□□□□ -0.21
VTI1B-204ENST00000554659 SIDT2Q8NBJ9 832 aaKnown RBP13.76□□□□□ -0.21
VTI1B-204ENST00000554659 ATAD1Q8NBU5 361 aa13.76□□□□□ -0.21
VTI1B-204ENST00000554659 OR52J3Q8NH60 311 aa13.76□□□□□ -0.21
VTI1B-204ENST00000554659 RFKQ969G6 155 aa13.76□□□□□ -0.21
VTI1B-204ENST00000554659 TRPV5Q9NQA5 729 aa13.76□□□□□ -0.21
VTI1B-204ENST00000554659 CFAP97Q9P2B7 532 aa13.76□□□□□ -0.21
VTI1B-204ENST00000554659 MRPS33Q9Y291 106 aaKnown RBP13.76□□□□□ -0.21
VTI1B-204ENST00000554659 FGF19O95750 216 aa13.76□□□□□ -0.21
VTI1B-204ENST00000554659 C8GP07360 202 aa13.76□□□□□ -0.21
VTI1B-204ENST00000554659 AOC1P19801 751 aa13.76□□□□□ -0.21
VTI1B-204ENST00000554659 ACADLP28330 430 aa13.76□□□□□ -0.21
VTI1B-204ENST00000554659 CLCNKBP51801 687 aa13.76□□□□□ -0.21
VTI1B-204ENST00000554659 CDH12P55289 794 aa13.76□□□□□ -0.21
VTI1B-204ENST00000554659 CHIT1Q13231 466 aa13.76□□□□□ -0.21
VTI1B-204ENST00000554659 FBXO48Q5FWF7 155 aa13.76□□□□□ -0.21
VTI1B-204ENST00000554659 CPNE9Q8IYJ1 553 aa13.76□□□□□ -0.21
VTI1B-204ENST00000554659 SRFBP1Q8NEF9 429 aaKnown RBP13.76□□□□□ -0.21
VTI1B-204ENST00000554659 ZNF347Q96SE7 839 aa13.76□□□□□ -0.21
VTI1B-204ENST00000554659 ZNF304Q9HCX3 659 aa13.76□□□□□ -0.21
VTI1B-204ENST00000554659 HMGXB4Q9UGU5 601 aa13.76□□□□□ -0.21
VTI1B-204ENST00000554659 EI24O14681 340 aa13.76□□□□□ -0.21
VTI1B-204ENST00000554659 KRT33AO76009 404 aa13.76□□□□□ -0.21
VTI1B-204ENST00000554659 NDUFV1P49821 464 aa13.76□□□□□ -0.21
VTI1B-204ENST00000554659 LARS2Q15031 903 aaKnown RBP13.76□□□□□ -0.21
VTI1B-204ENST00000554659 FAM174BQ3ZCQ3 159 aa13.76□□□□□ -0.21
VTI1B-204ENST00000554659 ATG10Q9H0Y0 220 aa13.76□□□□□ -0.21
VTI1B-204ENST00000554659 TCRBV7S3A2A0A539 114 aa13.76□□□□□ -0.21
VTI1B-204ENST00000554659 H3BNH8 94 aa13.76□□□□□ -0.21
VTI1B-204ENST00000554659 hCG_2039718K7EN88 272 aa13.76□□□□□ -0.21
VTI1B-204ENST00000554659 ITM2AO43736 263 aa13.76□□□□□ -0.21
VTI1B-204ENST00000554659 C22orf31O95567 290 aa13.76□□□□□ -0.21
VTI1B-204ENST00000554659 IL1R2P27930 398 aa13.76□□□□□ -0.21
VTI1B-204ENST00000554659 DAG1Q14118 895 aa13.76□□□□□ -0.21
VTI1B-204ENST00000554659 SH3PXD2AQ5TCZ1 1133 aa13.76□□□□□ -0.21
VTI1B-204ENST00000554659 C8orf48Q96LL4 319 aa13.76□□□□□ -0.21
VTI1B-204ENST00000554659 ZNF536O15090 1300 aa13.75□□□□□ -0.21
VTI1B-204ENST00000554659 SLC22A1O15245 554 aa13.75□□□□□ -0.21
VTI1B-204ENST00000554659 UGT2B4P06133 528 aa13.75□□□□□ -0.21
VTI1B-204ENST00000554659 SLC18A2Q05940 514 aa13.75□□□□□ -0.21
VTI1B-204ENST00000554659 SLC43A3Q8NBI5 491 aa13.75□□□□□ -0.21
VTI1B-204ENST00000554659 TAMM41Q96BW9 452 aa13.75□□□□□ -0.21
VTI1B-204ENST00000554659 PCDHAC1Q9H158 963 aa13.75□□□□□ -0.21
VTI1B-204ENST00000554659 TOR3AQ9H497 397 aa13.75□□□□□ -0.21
VTI1B-204ENST00000554659 NMUR1Q9HB89 426 aa13.75□□□□□ -0.21
VTI1B-204ENST00000554659 RRAGCQ9HB90 399 aa13.75□□□□□ -0.21
VTI1B-204ENST00000554659 NKX1-2Q9UD57 310 aaPredicted RBP13.75□□□□□ -0.21
VTI1B-204ENST00000554659 IKZF2Q9UKS7 526 aa13.75□□□□□ -0.21
VTI1B-204ENST00000554659 PCDHGA10Q9Y5H3 936 aa13.75□□□□□ -0.21
VTI1B-204ENST00000554659 CACNB4O00305 520 aaPredicted RBP13.75□□□□□ -0.21
VTI1B-204ENST00000554659 CDK14O94921 469 aa13.75□□□□□ -0.21
VTI1B-204ENST00000554659 ADH1CP00326 375 aa13.75□□□□□ -0.21
VTI1B-204ENST00000554659 ZBED5Q49AG3 693 aa13.75□□□□□ -0.21
VTI1B-204ENST00000554659 PLEKHG4Q58EX7 1191 aa13.75□□□□□ -0.21
VTI1B-204ENST00000554659 RUNDC3AQ59EK9 446 aa13.75□□□□□ -0.21
VTI1B-204ENST00000554659 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.75□□□□□ -0.21
VTI1B-204ENST00000554659 UBE2J2Q8N2K1 259 aa13.75□□□□□ -0.21
VTI1B-204ENST00000554659 TRPM4Q8TD43 1214 aa13.75□□□□□ -0.21
VTI1B-204ENST00000554659 ZNF516Q92618 1163 aa13.75□□□□□ -0.21
VTI1B-204ENST00000554659 PSMG2Q969U7 264 aa13.75□□□□□ -0.21
VTI1B-204ENST00000554659 FEM1CQ96JP0 617 aa13.75□□□□□ -0.21
VTI1B-204ENST00000554659 FAM53CQ9NYF3 392 aa13.75□□□□□ -0.21
VTI1B-204ENST00000554659 FKBPLQ9UIM3 349 aa13.75□□□□□ -0.21
VTI1B-204ENST00000554659 ZNF214Q9UL59 606 aaPredicted RBP13.75□□□□□ -0.21
VTI1B-204ENST00000554659 ZFP37Q9Y6Q3 630 aaPredicted RBP13.75□□□□□ -0.21
VTI1B-204ENST00000554659 SLIT2O94813 1529 aa13.75□□□□□ -0.21
VTI1B-204ENST00000554659 MAGEB3O15480 346 aa13.75□□□□□ -0.21
VTI1B-204ENST00000554659 PRKAR2AP13861 404 aaKnown RBP13.75□□□□□ -0.21
VTI1B-204ENST00000554659 DNAJB1P25685 340 aa13.75□□□□□ -0.21
VTI1B-204ENST00000554659 TPTEP56180 551 aa13.75□□□□□ -0.21
VTI1B-204ENST00000554659 MTPNP58546 118 aa13.75□□□□□ -0.21
VTI1B-204ENST00000554659 RTL4Q6ZR62 310 aa13.75□□□□□ -0.21
VTI1B-204ENST00000554659 SLC24A5Q71RS6 500 aa13.75□□□□□ -0.21
VTI1B-204ENST00000554659 CEP295NLQ96MC4 621 aa13.75□□□□□ -0.21
VTI1B-204ENST00000554659 TMEM27Q9HBJ8 222 aa13.75□□□□□ -0.21
VTI1B-204ENST00000554659 RUVBL1Q9Y265 456 aaKnown RBP13.75□□□□□ -0.21
VTI1B-204ENST00000554659 TESMINQ9Y4I5 508 aa13.75□□□□□ -0.21
VTI1B-204ENST00000554659 PDHA2P29803 388 aa13.75□□□□□ -0.21
VTI1B-204ENST00000554659 MXD1Q05195 221 aa13.75□□□□□ -0.21
VTI1B-204ENST00000554659 E2F2Q14209 437 aa13.75□□□□□ -0.21
VTI1B-204ENST00000554659 NADK2Q4G0N4 442 aa13.75□□□□□ -0.21
VTI1B-204ENST00000554659 SLC9A4Q6AI14 798 aa13.75□□□□□ -0.21
VTI1B-204ENST00000554659 C6orf89Q6UWU4 347 aa13.75□□□□□ -0.21
VTI1B-204ENST00000554659 DMRTB1Q96MA1 342 aa13.75□□□□□ -0.21
VTI1B-204ENST00000554659 HAPLN3Q96S86 360 aa13.75□□□□□ -0.21
VTI1B-204ENST00000554659 KCNN2Q9H2S1 579 aa13.75□□□□□ -0.21
VTI1B-204ENST00000554659 FAM83DQ9H4H8 585 aa13.75□□□□□ -0.21
VTI1B-204ENST00000554659 FKBP14Q9NWM8 211 aa13.75□□□□□ -0.21
VTI1B-204ENST00000554659 PPM1HQ9ULR3 514 aa13.75□□□□□ -0.21
VTI1B-204ENST00000554659 PCDHGC4Q9Y5F7 938 aa13.75□□□□□ -0.21
VTI1B-204ENST00000554659 OR14I1A6ND48 311 aa13.74□□□□□ -0.21
VTI1B-204ENST00000554659 NEDD8-MDP1E9PL57 170 aa13.74□□□□□ -0.21
VTI1B-204ENST00000554659 SYN3O14994 580 aa13.74□□□□□ -0.21
VTI1B-204ENST00000554659 ARFIP1P53367 373 aa13.74□□□□□ -0.21
VTI1B-204ENST00000554659 NCBP2-AS2Q69YL0 99 aa13.74□□□□□ -0.21
VTI1B-204ENST00000554659 ANKRD46Q86W74 232 aa13.74□□□□□ -0.21
VTI1B-204ENST00000554659 OR7D4Q8NG98 312 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms