RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 PRKACBP22694 351 aa12.06□□□□□ -0.48
SHMT2-207ENST00000553837 OXTRP30559 389 aa12.06□□□□□ -0.48
SHMT2-207ENST00000553837 SLC26A3P40879 764 aa12.06□□□□□ -0.48
SHMT2-207ENST00000553837 SERPINB10P48595 397 aa12.06□□□□□ -0.48
SHMT2-207ENST00000553837 SUOXP51687 545 aa12.06□□□□□ -0.48
SHMT2-207ENST00000553837 ZNF140P52738 457 aaPredicted RBP12.06□□□□□ -0.48
SHMT2-207ENST00000553837 STC1P52823 247 aa12.06□□□□□ -0.48
SHMT2-207ENST00000553837 HERVK_113P63132 956 aa12.06□□□□□ -0.48
SHMT2-207ENST00000553837 GALNT1Q10472 559 aaPredicted RBP12.06□□□□□ -0.48
SHMT2-207ENST00000553837 CDC20Q12834 499 aa12.06□□□□□ -0.48
SHMT2-207ENST00000553837 AQP6Q13520 282 aa12.06□□□□□ -0.48
SHMT2-207ENST00000553837 AASDHQ4L235 1098 aaPredicted RBP12.06□□□□□ -0.48
SHMT2-207ENST00000553837 DSG4Q86SJ6 1040 aa12.06□□□□□ -0.48
SHMT2-207ENST00000553837 ARMC8Q8IUR7 673 aa12.06□□□□□ -0.48
SHMT2-207ENST00000553837 DENND1CQ8IV53 801 aa12.06□□□□□ -0.48
SHMT2-207ENST00000553837 SIX5Q8N196 739 aa12.06□□□□□ -0.48
SHMT2-207ENST00000553837 PTGR2Q8N8N7 351 aaPredicted RBP12.06□□□□□ -0.48
SHMT2-207ENST00000553837 PAPD5Q8NDF8 572 aaKnown RBP12.06□□□□□ -0.48
SHMT2-207ENST00000553837 ZFP90Q8TF47 636 aa12.06□□□□□ -0.48
SHMT2-207ENST00000553837 GIMAP1Q8WWP7 306 aa12.06□□□□□ -0.48
SHMT2-207ENST00000553837 AARSD1Q9BTE6 412 aaKnown RBP12.06□□□□□ -0.48
SHMT2-207ENST00000553837 TTLL2Q9BWV7 592 aa12.06□□□□□ -0.48
SHMT2-207ENST00000553837 ERVK-6Q9BXR3 956 aa12.06□□□□□ -0.48
SHMT2-207ENST00000553837 HOXD1Q9GZZ0 328 aa12.06□□□□□ -0.48
SHMT2-207ENST00000553837 ADNPQ9H2P0 1102 aa12.06□□□□□ -0.48
SHMT2-207ENST00000553837 SOX17Q9H6I2 414 aaPredicted RBP12.06□□□□□ -0.48
SHMT2-207ENST00000553837 ELAC1Q9H777 363 aaKnown RBP12.06□□□□□ -0.48
SHMT2-207ENST00000553837 FBXO8Q9NRD0 319 aa12.06□□□□□ -0.48
SHMT2-207ENST00000553837 CATSPERZQ9NTU4 200 aa12.06□□□□□ -0.48
SHMT2-207ENST00000553837 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.06□□□□□ -0.48
SHMT2-207ENST00000553837 ARVCFO00192 962 aa12.06□□□□□ -0.48
SHMT2-207ENST00000553837 ARPC2O15144 300 aa12.06□□□□□ -0.48
SHMT2-207ENST00000553837 CDK14O94921 469 aa12.06□□□□□ -0.48
SHMT2-207ENST00000553837 NDST3O95803 873 aa12.06□□□□□ -0.48
SHMT2-207ENST00000553837 COL6A1P12109 1028 aa12.06□□□□□ -0.48
SHMT2-207ENST00000553837 CRHBPP24387 322 aa12.06□□□□□ -0.48
SHMT2-207ENST00000553837 TUFMP49411 452 aaKnown RBP12.06□□□□□ -0.48
SHMT2-207ENST00000553837 NFKB2Q00653 900 aa12.06□□□□□ -0.48
SHMT2-207ENST00000553837 IFITM2Q01629 132 aa12.06□□□□□ -0.48
SHMT2-207ENST00000553837 ATAD3BQ5T9A4 648 aa12.06□□□□□ -0.48
SHMT2-207ENST00000553837 UGT3A1Q6NUS8 523 aa12.06□□□□□ -0.48
SHMT2-207ENST00000553837 THAP5Q7Z6K1 395 aa12.06□□□□□ -0.48
SHMT2-207ENST00000553837 SLC22A16Q86VW1 577 aa12.06□□□□□ -0.48
SHMT2-207ENST00000553837 FUNDC1Q8IVP5 155 aa12.06□□□□□ -0.48
SHMT2-207ENST00000553837 GABPB2Q8TAK5 448 aaPredicted RBP12.06□□□□□ -0.48
SHMT2-207ENST00000553837 OSCP1Q8WVF1 389 aa12.06□□□□□ -0.48
SHMT2-207ENST00000553837 CAPSLQ8WWF8 208 aa12.06□□□□□ -0.48
SHMT2-207ENST00000553837 ATL1Q8WXF7 558 aa12.06□□□□□ -0.48
SHMT2-207ENST00000553837 ZNF486Q96H40 463 aaPredicted RBP12.06□□□□□ -0.48
SHMT2-207ENST00000553837 TXNDC15Q96J42 360 aa12.06□□□□□ -0.48
SHMT2-207ENST00000553837 KCNA7Q96RP8 456 aa12.06□□□□□ -0.48
SHMT2-207ENST00000553837 ATOH8Q96SQ7 321 aa12.06□□□□□ -0.48
SHMT2-207ENST00000553837 BCL7BQ9BQE9 202 aa12.06□□□□□ -0.48
SHMT2-207ENST00000553837 CENPOQ9BU64 300 aa12.06□□□□□ -0.48
SHMT2-207ENST00000553837 BDH2Q9BUT1 245 aa12.06□□□□□ -0.48
SHMT2-207ENST00000553837 VN1R3Q9BXE9 311 aa12.06□□□□□ -0.48
SHMT2-207ENST00000553837 SP140LQ9H930 580 aa12.06□□□□□ -0.48
SHMT2-207ENST00000553837 ANAPC2Q9UJX6 822 aa12.06□□□□□ -0.48
SHMT2-207ENST00000553837 BAG5Q9UL15 447 aa12.06□□□□□ -0.48
SHMT2-207ENST00000553837 DNAJC15Q9Y5T4 150 aa12.06□□□□□ -0.48
SHMT2-207ENST00000553837 ILVBLA1L0T0 632 aa12.05□□□□□ -0.48
SHMT2-207ENST00000553837 M0QX08 132 aa12.05□□□□□ -0.48
SHMT2-207ENST00000553837 INPP4BO15327 924 aa12.05□□□□□ -0.48
SHMT2-207ENST00000553837 COCHO43405 550 aa12.05□□□□□ -0.48
SHMT2-207ENST00000553837 CR2P20023 1033 aa12.05□□□□□ -0.48
SHMT2-207ENST00000553837 NR4A1P22736 598 aa12.05□□□□□ -0.48
SHMT2-207ENST00000553837 FMO4P31512 558 aa12.05□□□□□ -0.48
SHMT2-207ENST00000553837 APLP1P51693 650 aa12.05□□□□□ -0.48
SHMT2-207ENST00000553837 ILF2Q12905 390 aaKnown RBP12.05□□□□□ -0.48
SHMT2-207ENST00000553837 DGUOKQ16854 277 aa12.05□□□□□ -0.48
SHMT2-207ENST00000553837 PFKFB4Q16877 469 aa12.05□□□□□ -0.48
SHMT2-207ENST00000553837 TYSND1Q2T9J0 566 aa12.05□□□□□ -0.48
SHMT2-207ENST00000553837 MRNIPQ6NTE8 343 aa12.05□□□□□ -0.48
SHMT2-207ENST00000553837 PAQR3Q6TCH7 311 aa12.05□□□□□ -0.48
SHMT2-207ENST00000553837 SLC16A12Q6ZSM3 486 aa12.05□□□□□ -0.48
SHMT2-207ENST00000553837 R3HCC1LQ7Z5L2 792 aaKnown RBP12.05□□□□□ -0.48
SHMT2-207ENST00000553837 HEATR4Q86WZ0 1026 aa12.05□□□□□ -0.48
SHMT2-207ENST00000553837 FBXO22Q8NEZ5 403 aa12.05□□□□□ -0.48
SHMT2-207ENST00000553837 OR4K2Q8NGD2 314 aa12.05□□□□□ -0.48
SHMT2-207ENST00000553837 HDAC2Q92769 488 aaKnown RBP12.05□□□□□ -0.48
SHMT2-207ENST00000553837 ZNF599Q96NL3 588 aa12.05□□□□□ -0.48
SHMT2-207ENST00000553837 PSKH2Q96QS6 385 aa12.05□□□□□ -0.48
SHMT2-207ENST00000553837 YME1L1Q96TA2 773 aa12.05□□□□□ -0.48
SHMT2-207ENST00000553837 SLC30A3Q99726 388 aa12.05□□□□□ -0.48
SHMT2-207ENST00000553837 TTPALQ9BTX7 342 aa12.05□□□□□ -0.48
SHMT2-207ENST00000553837 TUBB1Q9H4B7 451 aa12.05□□□□□ -0.48
SHMT2-207ENST00000553837 IL1RL2Q9HB29 575 aa12.05□□□□□ -0.48
SHMT2-207ENST00000553837 NLE1Q9NVX2 485 aaPredicted RBP12.05□□□□□ -0.48
SHMT2-207ENST00000553837 MAP10Q9P2G4 905 aa12.05□□□□□ -0.48
SHMT2-207ENST00000553837 ZMAT5Q9UDW3 170 aaKnown RBP12.05□□□□□ -0.48
SHMT2-207ENST00000553837 KLQ9UEF7 1012 aa12.05□□□□□ -0.48
SHMT2-207ENST00000553837 DNMT3LQ9UJW3 386 aa12.05□□□□□ -0.48
SHMT2-207ENST00000553837 ZNF229Q9UJW7 825 aa12.05□□□□□ -0.48
SHMT2-207ENST00000553837 FAM50BQ9Y247 325 aa12.05□□□□□ -0.48
SHMT2-207ENST00000553837 ZNF840PA6NDX5 716 aa12.05□□□□□ -0.48
SHMT2-207ENST00000553837 M0R3G1 203 aa12.05□□□□□ -0.48
SHMT2-207ENST00000553837 SCAMP3O14828 347 aaKnown RBP12.05□□□□□ -0.48
SHMT2-207ENST00000553837 AREL1O15033 823 aa12.05□□□□□ -0.48
SHMT2-207ENST00000553837 TSPAN3O60637 253 aa12.05□□□□□ -0.48
SHMT2-207ENST00000553837 SEC24AO95486 1093 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms