RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 ERLEC1Q96DZ1 483 aa3□□□□□ -1.93
VRK1-202ENST00000553683 SAT2Q96F10 170 aaPredicted RBP3□□□□□ -1.93
VRK1-202ENST00000553683 GIMAP5Q96F15 307 aa3□□□□□ -1.93
VRK1-202ENST00000553683 SENP5Q96HI0 755 aaPredicted RBP3□□□□□ -1.93
VRK1-202ENST00000553683 RHNO1Q9BSD3 238 aa3□□□□□ -1.93
VRK1-202ENST00000553683 TUBB2BQ9BVA1 445 aa3□□□□□ -1.93
VRK1-202ENST00000553683 TEX12Q9BXU0 123 aa3□□□□□ -1.93
VRK1-202ENST00000553683 MAK16Q9BXY0 300 aaKnown RBP3□□□□□ -1.93
VRK1-202ENST00000553683 MMP27Q9H306 513 aa3□□□□□ -1.93
VRK1-202ENST00000553683 KCNK15Q9H427 330 aa3□□□□□ -1.93
VRK1-202ENST00000553683 SLA2Q9H6Q3 261 aa3□□□□□ -1.93
VRK1-202ENST00000553683 ERVMER34-1Q9H9K5 563 aa3□□□□□ -1.93
VRK1-202ENST00000553683 CHMP1AQ9HD42 196 aaPredicted RBP3□□□□□ -1.93
VRK1-202ENST00000553683 TBC1D22BQ9NU19 505 aa3□□□□□ -1.93
VRK1-202ENST00000553683 KCNJ14Q9UNX9 436 aa3□□□□□ -1.93
VRK1-202ENST00000553683 GRIP1Q9Y3R0 1128 aa3□□□□□ -1.93
VRK1-202ENST00000553683 PCDHGA5Q9Y5G8 931 aa3□□□□□ -1.93
VRK1-202ENST00000553683 SOS1Q07889 1333 aaPredicted RBP2.99□□□□□ -1.93
VRK1-202ENST00000553683 MAGEB17A8MXT2 336 aa2.99□□□□□ -1.93
VRK1-202ENST00000553683 B4DLN1 442 aa2.99□□□□□ -1.93
VRK1-202ENST00000553683 AP3D1O14617 1153 aa2.99□□□□□ -1.93
VRK1-202ENST00000553683 SYNCRIPO60506 623 aaKnown RBP2.99□□□□□ -1.93
VRK1-202ENST00000553683 PIGNO95427 931 aa2.99□□□□□ -1.93
VRK1-202ENST00000553683 VPREB1P12018 145 aa2.99□□□□□ -1.93
VRK1-202ENST00000553683 MMP9P14780 707 aa2.99□□□□□ -1.93
VRK1-202ENST00000553683 HOXD13P35453 343 aa2.99□□□□□ -1.93
VRK1-202ENST00000553683 HADHAP40939 763 aa2.99□□□□□ -1.93
VRK1-202ENST00000553683 MRPL12P52815 198 aaKnown RBP2.99□□□□□ -1.93
VRK1-202ENST00000553683 CREB5Q02930 508 aa2.99□□□□□ -1.93
VRK1-202ENST00000553683 PRKCZQ05513 592 aa2.99□□□□□ -1.93
VRK1-202ENST00000553683 LGALS3BPQ08380 585 aa2.99□□□□□ -1.93
VRK1-202ENST00000553683 KRT33BQ14525 404 aa2.99□□□□□ -1.93
VRK1-202ENST00000553683 TAF13Q15543 124 aa2.99□□□□□ -1.93
VRK1-202ENST00000553683 CTU2Q2VPK5 515 aaKnown RBP2.99□□□□□ -1.93
VRK1-202ENST00000553683 FAM98BQ52LJ0 330 aaKnown RBP2.99□□□□□ -1.93
VRK1-202ENST00000553683 HYIQ5T013 277 aa2.99□□□□□ -1.93
VRK1-202ENST00000553683 LSMEM2Q8N112 164 aa2.99□□□□□ -1.93
VRK1-202ENST00000553683 MARVELD2Q8N4S9 558 aa2.99□□□□□ -1.93
VRK1-202ENST00000553683 DDHD1Q8NEL9 900 aa2.99□□□□□ -1.93
VRK1-202ENST00000553683 CTCFLQ8NI51 663 aaPredicted RBP2.99□□□□□ -1.93
VRK1-202ENST00000553683 HSD17B8Q92506 261 aa2.99□□□□□ -1.93
VRK1-202ENST00000553683 DAZLQ92904 295 aaKnown RBP2.99□□□□□ -1.93
VRK1-202ENST00000553683 EVI5LQ96CN4 794 aa2.99□□□□□ -1.93
VRK1-202ENST00000553683 FAM120BQ96EK7 910 aaKnown RBP2.99□□□□□ -1.93
VRK1-202ENST00000553683 FAM81BQ96LP2 452 aa2.99□□□□□ -1.93
VRK1-202ENST00000553683 ZNF582Q96NG8 517 aaPredicted RBP2.99□□□□□ -1.93
VRK1-202ENST00000553683 OR6C1Q96RD1 312 aa2.99□□□□□ -1.93
VRK1-202ENST00000553683 SRSF8Q9BRL6 282 aaKnown RBP2.99□□□□□ -1.93
VRK1-202ENST00000553683 CHCHD6Q9BRQ6 235 aa2.99□□□□□ -1.93
VRK1-202ENST00000553683 BTBD10Q9BSF8 475 aa2.99□□□□□ -1.93
VRK1-202ENST00000553683 MRPL1Q9BYD6 325 aaKnown RBP2.99□□□□□ -1.93
VRK1-202ENST00000553683 FTOQ9C0B1 505 aaKnown RBP eCLIP2.99□□□□□ -1.93
VRK1-202ENST00000553683 GFRA4Q9GZZ7 299 aa2.99□□□□□ -1.93
VRK1-202ENST00000553683 PPIL3Q9H2H8 161 aaKnown RBP2.99□□□□□ -1.93
VRK1-202ENST00000553683 SIX2Q9NPC8 291 aa2.99□□□□□ -1.93
VRK1-202ENST00000553683 WSB2Q9NYS7 404 aaPredicted RBP2.99□□□□□ -1.93
VRK1-202ENST00000553683 NPAP1Q9NZP6 1156 aa2.99□□□□□ -1.93
VRK1-202ENST00000553683 LARSQ9P2J5 1176 aaKnown RBP2.99□□□□□ -1.93
VRK1-202ENST00000553683 ZNF148Q9UQR1 794 aa2.99□□□□□ -1.93
VRK1-202ENST00000553683 WBP11Q9Y2W2 641 aaKnown RBP2.99□□□□□ -1.93
VRK1-202ENST00000553683 RABGAP1Q9Y3P9 1069 aa2.99□□□□□ -1.93
VRK1-202ENST00000553683 PRSS21Q9Y6M0 314 aa2.99□□□□□ -1.93
VRK1-202ENST00000553683 IGLV9-49A0A0B4J1Y8 123 aa2.98□□□□□ -1.93
VRK1-202ENST00000553683 A0A1W2PRB8 838 aa2.98□□□□□ -1.93
VRK1-202ENST00000553683 ANKRD18BA2A2Z9 1011 aa2.98□□□□□ -1.93
VRK1-202ENST00000553683 OR2A25A4D2G3 310 aa2.98□□□□□ -1.93
VRK1-202ENST00000553683 A6NCN8 305 aa2.98□□□□□ -1.93
VRK1-202ENST00000553683 OR6C76A6NM76 312 aa2.98□□□□□ -1.93
VRK1-202ENST00000553683 ATP6V0E1O15342 81 aa2.98□□□□□ -1.93
VRK1-202ENST00000553683 TSPAN1O60635 241 aa2.98□□□□□ -1.93
VRK1-202ENST00000553683 PRAMEF11O60813 436 aa2.98□□□□□ -1.93
VRK1-202ENST00000553683 MED24O75448 989 aa2.98□□□□□ -1.93
VRK1-202ENST00000553683 PRKRAO75569 313 aaKnown RBP2.98□□□□□ -1.93
VRK1-202ENST00000553683 AP2A2O94973 939 aa2.98□□□□□ -1.93
VRK1-202ENST00000553683 CD48P09326 243 aa2.98□□□□□ -1.93
VRK1-202ENST00000553683 FRMD6-AS1P0C7T7 363 aa2.98□□□□□ -1.93
VRK1-202ENST00000553683 CEACAM1P13688 526 aa2.98□□□□□ -1.93
VRK1-202ENST00000553683 CEBPBP17676 345 aa2.98□□□□□ -1.93
VRK1-202ENST00000553683 ALOX12P18054 663 aa2.98□□□□□ -1.93
VRK1-202ENST00000553683 EFNA1P20827 205 aaPredicted RBP2.98□□□□□ -1.93
VRK1-202ENST00000553683 CA6P23280 308 aa2.98□□□□□ -1.93
VRK1-202ENST00000553683 WNT5AP41221 380 aa2.98□□□□□ -1.93
VRK1-202ENST00000553683 SUOXP51687 545 aa2.98□□□□□ -1.93
VRK1-202ENST00000553683 LUMP51884 338 aaPredicted RBP2.98□□□□□ -1.93
VRK1-202ENST00000553683 HERV-K104P61576 105 aa2.98□□□□□ -1.93
VRK1-202ENST00000553683 PPP2R2BQ00005 443 aa2.98□□□□□ -1.93
VRK1-202ENST00000553683 CDK3Q00526 305 aa2.98□□□□□ -1.93
VRK1-202ENST00000553683 PNRC1Q12796 327 aaPredicted RBP2.98□□□□□ -1.93
VRK1-202ENST00000553683 DLG2Q15700 870 aa2.98□□□□□ -1.93
VRK1-202ENST00000553683 MDH1BQ5I0G3 518 aa2.98□□□□□ -1.93
VRK1-202ENST00000553683 CLEC17AQ6ZS10 378 aa2.98□□□□□ -1.93
VRK1-202ENST00000553683 BRINP3Q76B58 766 aa2.98□□□□□ -1.93
VRK1-202ENST00000553683 HAUS6Q7Z4H7 955 aa2.98□□□□□ -1.93
VRK1-202ENST00000553683 CRYBG2Q8N1P7 616 aa2.98□□□□□ -1.93
VRK1-202ENST00000553683 MRGPRDQ8TDS7 321 aa2.98□□□□□ -1.93
VRK1-202ENST00000553683 MYADMQ96S97 322 aa2.98□□□□□ -1.93
VRK1-202ENST00000553683 PSD2Q9BQI7 771 aa2.98□□□□□ -1.93
VRK1-202ENST00000553683 ABHD6Q9BV23 337 aa2.98□□□□□ -1.93
VRK1-202ENST00000553683 KIFC3Q9BVG8 833 aa2.98□□□□□ -1.93
VRK1-202ENST00000553683 ARRDC1-AS1Q9H2J1 176 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms