RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 HSP90AA5PQ58FG0 334 aa10.04□□□□□ -0.8
TRAFD1-208ENST00000552890 CAPRIN2Q6IMN6 1127 aaKnown RBP10.04□□□□□ -0.8
TRAFD1-208ENST00000552890 IGF2-ASQ6U949 168 aa10.04□□□□□ -0.8
TRAFD1-208ENST00000552890 BPHLQ86WA6 291 aaPredicted RBP10.04□□□□□ -0.8
TRAFD1-208ENST00000552890 OOSP2Q86WS3 158 aa10.04□□□□□ -0.8
TRAFD1-208ENST00000552890 KMT5CQ86Y97 462 aa10.04□□□□□ -0.8
TRAFD1-208ENST00000552890 RELL1Q8IUW5 271 aa10.04□□□□□ -0.8
TRAFD1-208ENST00000552890 SLC22A15Q8IZD6 547 aa10.04□□□□□ -0.8
TRAFD1-208ENST00000552890 CHCHD4Q8N4Q1 142 aa10.04□□□□□ -0.8
TRAFD1-208ENST00000552890 CLDN19Q8N6F1 224 aa10.04□□□□□ -0.8
TRAFD1-208ENST00000552890 C2CD4AQ8NCU7 369 aaPredicted RBP10.04□□□□□ -0.8
TRAFD1-208ENST00000552890 AGBL5Q8NDL9 886 aa10.04□□□□□ -0.8
TRAFD1-208ENST00000552890 LPGAT1Q92604 370 aa10.04□□□□□ -0.8
TRAFD1-208ENST00000552890 TSPAN17Q96FV3 270 aa10.04□□□□□ -0.8
TRAFD1-208ENST00000552890 ZPBPQ9BS86 351 aa10.04□□□□□ -0.8
TRAFD1-208ENST00000552890 SCNM1Q9BWG6 230 aa10.04□□□□□ -0.8
TRAFD1-208ENST00000552890 P2RY12Q9H244 342 aa10.04□□□□□ -0.8
TRAFD1-208ENST00000552890 DPH5Q9H2P9 285 aa10.04□□□□□ -0.8
TRAFD1-208ENST00000552890 TFB2MQ9H5Q4 396 aaKnown RBP10.04□□□□□ -0.8
TRAFD1-208ENST00000552890 IMP3Q9NV31 184 aaKnown RBP10.04□□□□□ -0.8
TRAFD1-208ENST00000552890 OR6C2Q9NZP2 312 aa10.04□□□□□ -0.8
TRAFD1-208ENST00000552890 DKK4Q9UBT3 224 aa10.04□□□□□ -0.8
TRAFD1-208ENST00000552890 LNPEPQ9UIQ6 1025 aa10.04□□□□□ -0.8
TRAFD1-208ENST00000552890 NCOR2Q9Y618 2525 aa10.03□□□□□ -0.8
TRAFD1-208ENST00000552890 SLC5A10A0PJK1 596 aa10.03□□□□□ -0.8
TRAFD1-208ENST00000552890 CCDC189A1A4V9 331 aa10.03□□□□□ -0.8
TRAFD1-208ENST00000552890 OR51F1A6NGY5 319 aa10.03□□□□□ -0.8
TRAFD1-208ENST00000552890 ESPNB1AK53 854 aa10.03□□□□□ -0.8
TRAFD1-208ENST00000552890 S1PR4O95977 384 aa10.03□□□□□ -0.8
TRAFD1-208ENST00000552890 PROS1P07225 676 aa10.03□□□□□ -0.8
TRAFD1-208ENST00000552890 ARNTP27540 789 aa10.03□□□□□ -0.8
TRAFD1-208ENST00000552890 MAP4P27816 1152 aaKnown RBP10.03□□□□□ -0.8
TRAFD1-208ENST00000552890 SHMT2P34897 504 aa10.03□□□□□ -0.8
TRAFD1-208ENST00000552890 SLC19A1P41440 591 aa10.03□□□□□ -0.8
TRAFD1-208ENST00000552890 LSSP48449 732 aa10.03□□□□□ -0.8
TRAFD1-208ENST00000552890 LIMK2P53671 638 aa10.03□□□□□ -0.8
TRAFD1-208ENST00000552890 SLC12A2P55011 1212 aa10.03□□□□□ -0.8
TRAFD1-208ENST00000552890 MAZP56270 477 aaKnown RBP10.03□□□□□ -0.8
TRAFD1-208ENST00000552890 RAB15P59190 212 aa10.03□□□□□ -0.8
TRAFD1-208ENST00000552890 HSPA14Q0VDF9 509 aa10.03□□□□□ -0.8
TRAFD1-208ENST00000552890 BOP1Q14137 746 aaKnown RBP10.03□□□□□ -0.8
TRAFD1-208ENST00000552890 SEPT7Q16181 437 aaKnown RBP10.03□□□□□ -0.8
TRAFD1-208ENST00000552890 ISXQ2M1V0 245 aa10.03□□□□□ -0.8
TRAFD1-208ENST00000552890 ZNF648Q5T619 568 aaPredicted RBP10.03□□□□□ -0.8
TRAFD1-208ENST00000552890 CES3Q6UWW8 571 aa10.03□□□□□ -0.8
TRAFD1-208ENST00000552890 C3orf62Q6ZUJ4 267 aa10.03□□□□□ -0.8
TRAFD1-208ENST00000552890 TAOK1Q7L7X3 1001 aa10.03□□□□□ -0.8
TRAFD1-208ENST00000552890 Q8N9G6 341 aaPredicted RBP10.03□□□□□ -0.8
TRAFD1-208ENST00000552890 FBXO36Q8NEA4 188 aa10.03□□□□□ -0.8
TRAFD1-208ENST00000552890 OR5K2Q8NHB8 316 aa10.03□□□□□ -0.8
TRAFD1-208ENST00000552890 FBXO25Q8TCJ0 367 aa10.03□□□□□ -0.8
TRAFD1-208ENST00000552890 SKA2Q8WVK7 121 aaPredicted RBP10.03□□□□□ -0.8
TRAFD1-208ENST00000552890 LCN9Q8WX39 176 aa10.03□□□□□ -0.8
TRAFD1-208ENST00000552890 UBXN4Q92575 508 aa10.03□□□□□ -0.8
TRAFD1-208ENST00000552890 INPP5DQ92835 1189 aa10.03□□□□□ -0.8
TRAFD1-208ENST00000552890 RAD51AP1Q96B01 352 aa10.03□□□□□ -0.8
TRAFD1-208ENST00000552890 CFAP36Q96G28 342 aa10.03□□□□□ -0.8
TRAFD1-208ENST00000552890 TEFMQ96QE5 360 aaKnown RBP10.03□□□□□ -0.8
TRAFD1-208ENST00000552890 FMO2Q99518 471 aa10.03□□□□□ -0.8
TRAFD1-208ENST00000552890 LRRC1Q9BTT6 524 aa10.03□□□□□ -0.8
TRAFD1-208ENST00000552890 TRIM54Q9BYV2 358 aa10.03□□□□□ -0.8
TRAFD1-208ENST00000552890 ASPSCR1Q9BZE9 553 aa10.03□□□□□ -0.8
TRAFD1-208ENST00000552890 WWP1Q9H0M0 922 aa10.03□□□□□ -0.8
TRAFD1-208ENST00000552890 OR52A5Q9H2C5 316 aa10.03□□□□□ -0.8
TRAFD1-208ENST00000552890 SYNDIG1Q9H7V2 258 aa10.03□□□□□ -0.8
TRAFD1-208ENST00000552890 L2HGDHQ9H9P8 463 aa10.03□□□□□ -0.8
TRAFD1-208ENST00000552890 POLR1BQ9H9Y6 1135 aa10.03□□□□□ -0.8
TRAFD1-208ENST00000552890 SYTL2Q9HCH5 934 aa10.03□□□□□ -0.8
TRAFD1-208ENST00000552890 SAYSD1Q9NPB0 183 aa10.03□□□□□ -0.8
TRAFD1-208ENST00000552890 THSD1Q9NS62 852 aa10.03□□□□□ -0.8
TRAFD1-208ENST00000552890 UTP6Q9NYH9 597 aaKnown RBP10.03□□□□□ -0.8
TRAFD1-208ENST00000552890 PDP2Q9P2J9 529 aa10.03□□□□□ -0.8
TRAFD1-208ENST00000552890 TRMT6Q9UJA5 497 aaKnown RBP10.03□□□□□ -0.8
TRAFD1-208ENST00000552890 CHMP2BQ9UQN3 213 aa10.03□□□□□ -0.8
TRAFD1-208ENST00000552890 ASF1AQ9Y294 204 aa10.03□□□□□ -0.8
TRAFD1-208ENST00000552890 PCDHB11Q9Y5F2 797 aa10.03□□□□□ -0.8
TRAFD1-208ENST00000552890 PCDHGA8Q9Y5G5 932 aa10.03□□□□□ -0.8
TRAFD1-208ENST00000552890 IKBKGQ9Y6K9 419 aa10.03□□□□□ -0.8
TRAFD1-208ENST00000552890 UNC13CQ8NB66 2214 aa10.03□□□□□ -0.8
TRAFD1-208ENST00000552890 PIKFYVEQ9Y2I7 2098 aa10.03□□□□□ -0.8
TRAFD1-208ENST00000552890 CEP295Q9C0D2 2601 aa10.03□□□□□ -0.8
TRAFD1-208ENST00000552890 ASXL3Q9C0F0 2248 aa10.02□□□□□ -0.81
TRAFD1-208ENST00000552890 PPM1DO15297 605 aa10.02□□□□□ -0.81
TRAFD1-208ENST00000552890 GPR39O43194 453 aa10.02□□□□□ -0.81
TRAFD1-208ENST00000552890 SGTAO43765 313 aa10.02□□□□□ -0.81
TRAFD1-208ENST00000552890 HYAL3O43820 417 aaPredicted RBP10.02□□□□□ -0.81
TRAFD1-208ENST00000552890 OR1I1O60431 355 aa10.02□□□□□ -0.81
TRAFD1-208ENST00000552890 CSO75390 466 aaKnown RBP10.02□□□□□ -0.81
TRAFD1-208ENST00000552890 GPC4O75487 556 aa10.02□□□□□ -0.81
TRAFD1-208ENST00000552890 CATP04040 527 aaKnown RBP10.02□□□□□ -0.81
TRAFD1-208ENST00000552890 ANKRD34CP0C6C1 535 aa10.02□□□□□ -0.81
TRAFD1-208ENST00000552890 JMJD7P0C870 316 aa10.02□□□□□ -0.81
TRAFD1-208ENST00000552890 CD82P27701 267 aa10.02□□□□□ -0.81
TRAFD1-208ENST00000552890 CD1CP29017 333 aa10.02□□□□□ -0.81
TRAFD1-208ENST00000552890 FMO4P31512 558 aa10.02□□□□□ -0.81
TRAFD1-208ENST00000552890 SPRP35270 261 aaPredicted RBP10.02□□□□□ -0.81
TRAFD1-208ENST00000552890 MAGEA4P43358 317 aa10.02□□□□□ -0.81
TRAFD1-208ENST00000552890 CAPZBP47756 277 aa10.02□□□□□ -0.81
TRAFD1-208ENST00000552890 ARL4DP49703 201 aa10.02□□□□□ -0.81
TRAFD1-208ENST00000552890 CDKN1CP49918 316 aaPredicted RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms