RNA–Protein interactions for RNA: ENST00000550155.5

CNOT2-222, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 2

Gene CNOT2, Length 842 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-222	ENST00000550155	CABLES2	Q9BTV7	478 aa		4.06	□□□□□ -1.76
CNOT2-222	ENST00000550155	TRAF4	Q9BUZ4	470 aa	Predicted RBP	4.06	□□□□□ -1.76
CNOT2-222	ENST00000550155	P2RY12	Q9H244	342 aa		4.06	□□□□□ -1.76
CNOT2-222	ENST00000550155	MUC13	Q9H3R2	512 aa		4.06	□□□□□ -1.76
CNOT2-222	ENST00000550155	HHATL	Q9HCP6	504 aa		4.06	□□□□□ -1.76
CNOT2-222	ENST00000550155	TDRD9	Q8NDG6	1382 aa	Known RBP	4.05	□□□□□ -1.76
CNOT2-222	ENST00000550155		A0A1W2PRB8	838 aa		4.05	□□□□□ -1.76
CNOT2-222	ENST00000550155		E9PQ18	207 aa		4.05	□□□□□ -1.76
CNOT2-222	ENST00000550155	DNM1L	O00429	736 aa		4.05	□□□□□ -1.76
CNOT2-222	ENST00000550155	ZNF197	O14709	1029 aa		4.05	□□□□□ -1.76
CNOT2-222	ENST00000550155	FRMD6-AS1	P0C7T7	363 aa		4.05	□□□□□ -1.76
CNOT2-222	ENST00000550155	LMO4	P61968	165 aa		4.05	□□□□□ -1.76
CNOT2-222	ENST00000550155	CFAP77	Q6ZQR2	320 aa		4.05	□□□□□ -1.76
CNOT2-222	ENST00000550155	PXK	Q7Z7A4	578 aa		4.05	□□□□□ -1.76
CNOT2-222	ENST00000550155	LSMEM2	Q8N112	164 aa		4.05	□□□□□ -1.76
CNOT2-222	ENST00000550155	PRAC1	Q96KF2	57 aa		4.05	□□□□□ -1.76
CNOT2-222	ENST00000550155	SGK494	Q96LW2	274 aa		4.05	□□□□□ -1.76
CNOT2-222	ENST00000550155	ZNF582	Q96NG8	517 aa	Predicted RBP	4.05	□□□□□ -1.76
CNOT2-222	ENST00000550155	CDK19	Q9BWU1	502 aa		4.05	□□□□□ -1.76
CNOT2-222	ENST00000550155	PITPNM3	Q9BZ71	974 aa		4.05	□□□□□ -1.76
CNOT2-222	ENST00000550155	MBNL1	Q9NR56	388 aa	Known RBP	4.05	□□□□□ -1.76
CNOT2-222	ENST00000550155	ORC3	Q9UBD5	711 aa	Predicted RBP	4.05	□□□□□ -1.76
CNOT2-222	ENST00000550155	AMACR	Q9UHK6	382 aa		4.05	□□□□□ -1.76
CNOT2-222	ENST00000550155	SPIN1	Q9Y657	262 aa	Predicted RBP	4.05	□□□□□ -1.76
CNOT2-222	ENST00000550155	CDC123	O75794	336 aa	Predicted RBP	4.04	□□□□□ -1.76
CNOT2-222	ENST00000550155	PIGN	O95427	931 aa		4.04	□□□□□ -1.76
CNOT2-222	ENST00000550155	TPO	P07202	933 aa		4.04	□□□□□ -1.76
CNOT2-222	ENST00000550155	TRIM49	P0CI25	452 aa		4.04	□□□□□ -1.76
CNOT2-222	ENST00000550155	TRIM49C	P0CI26	452 aa		4.04	□□□□□ -1.76
CNOT2-222	ENST00000550155	NMBR	P28336	390 aa		4.04	□□□□□ -1.76
CNOT2-222	ENST00000550155	SP3	Q02447	781 aa		4.04	□□□□□ -1.76
CNOT2-222	ENST00000550155	MAMLD1	Q13495	774 aa		4.04	□□□□□ -1.76
CNOT2-222	ENST00000550155	HNRNPD	Q14103	355 aa	Known RBP	4.04	□□□□□ -1.76
CNOT2-222	ENST00000550155	SGSM1	Q2NKQ1	1148 aa		4.04	□□□□□ -1.76
CNOT2-222	ENST00000550155	LCE3C	Q5T5A8	94 aa		4.04	□□□□□ -1.76
CNOT2-222	ENST00000550155	CYP4A22	Q5TCH4	519 aa		4.04	□□□□□ -1.76
CNOT2-222	ENST00000550155	BMPER	Q8N8U9	685 aa		4.04	□□□□□ -1.76
CNOT2-222	ENST00000550155	ANKRD52	Q8NB46	1076 aa		4.04	□□□□□ -1.76
CNOT2-222	ENST00000550155	OR1J1	Q8NGS3	322 aa		4.04	□□□□□ -1.76
CNOT2-222	ENST00000550155	TBC1D16	Q8TBP0	767 aa		4.04	□□□□□ -1.76
CNOT2-222	ENST00000550155	FAM222B	Q8WU58	562 aa		4.04	□□□□□ -1.76
CNOT2-222	ENST00000550155	UCMA	Q8WVF2	138 aa		4.04	□□□□□ -1.76
CNOT2-222	ENST00000550155	PGAM5	Q96HS1	289 aa		4.04	□□□□□ -1.76
CNOT2-222	ENST00000550155	FAM81B	Q96LP2	452 aa		4.04	□□□□□ -1.76
CNOT2-222	ENST00000550155	SLC22A12	Q96S37	553 aa		4.04	□□□□□ -1.76
CNOT2-222	ENST00000550155	EGFL8	Q99944	293 aa		4.04	□□□□□ -1.76
CNOT2-222	ENST00000550155	SLA2	Q9H6Q3	261 aa		4.04	□□□□□ -1.76
CNOT2-222	ENST00000550155	PCDHGA5	Q9Y5G8	931 aa		4.04	□□□□□ -1.76
CNOT2-222	ENST00000550155		A8MZ25	164 aa		4.03	□□□□□ -1.76
CNOT2-222	ENST00000550155	ATP6V0E1	O15342	81 aa		4.03	□□□□□ -1.76
CNOT2-222	ENST00000550155	PRKRA	O75569	313 aa	Known RBP	4.03	□□□□□ -1.76
CNOT2-222	ENST00000550155	TPPP	O94811	219 aa		4.03	□□□□□ -1.76
CNOT2-222	ENST00000550155	ACP2	P11117	423 aa		4.03	□□□□□ -1.76
CNOT2-222	ENST00000550155	LAMP2	P13473	410 aa		4.03	□□□□□ -1.76
CNOT2-222	ENST00000550155	KRTAP10-3	P60369	221 aa		4.03	□□□□□ -1.76
CNOT2-222	ENST00000550155	GPR17	Q13304	367 aa		4.03	□□□□□ -1.76
CNOT2-222	ENST00000550155	KRT33B	Q14525	404 aa		4.03	□□□□□ -1.76
CNOT2-222	ENST00000550155	ASTE1	Q2TB18	679 aa	Predicted RBP	4.03	□□□□□ -1.76
CNOT2-222	ENST00000550155	GORAB	Q5T7V8	394 aa		4.03	□□□□□ -1.76
CNOT2-222	ENST00000550155	JAKMIP3	Q5VZ66	844 aa		4.03	□□□□□ -1.76
CNOT2-222	ENST00000550155	IKBIP	Q70UQ0	350 aa		4.03	□□□□□ -1.76
CNOT2-222	ENST00000550155	MCEMP1	Q8IX19	187 aa		4.03	□□□□□ -1.76
CNOT2-222	ENST00000550155	SCYL3	Q8IZE3	742 aa		4.03	□□□□□ -1.76
CNOT2-222	ENST00000550155	RAB42	Q8N4Z0	105 aa		4.03	□□□□□ -1.76
CNOT2-222	ENST00000550155	SCFD2	Q8WU76	684 aa		4.03	□□□□□ -1.76
CNOT2-222	ENST00000550155	HSD17B8	Q92506	261 aa		4.03	□□□□□ -1.76
CNOT2-222	ENST00000550155	FGFBP2	Q9BYJ0	223 aa		4.03	□□□□□ -1.76
CNOT2-222	ENST00000550155	ACKR4	Q9NPB9	350 aa		4.03	□□□□□ -1.76
CNOT2-222	ENST00000550155	NPAP1	Q9NZP6	1156 aa		4.03	□□□□□ -1.76
CNOT2-222	ENST00000550155	LYVE1	Q9Y5Y7	322 aa		4.03	□□□□□ -1.76
CNOT2-222	ENST00000550155	FRMD3	A2A2Y4	597 aa		4.02	□□□□□ -1.77
CNOT2-222	ENST00000550155	KLF11	O14901	512 aa		4.02	□□□□□ -1.77
CNOT2-222	ENST00000550155	RB1	P06400	928 aa		4.02	□□□□□ -1.77
CNOT2-222	ENST00000550155	PON1	P27169	355 aa		4.02	□□□□□ -1.77
CNOT2-222	ENST00000550155	MAGEA11	P43364	429 aa		4.02	□□□□□ -1.77
CNOT2-222	ENST00000550155	SLC8A3	P57103	927 aa		4.02	□□□□□ -1.77
CNOT2-222	ENST00000550155	PRKCZ	Q05513	592 aa		4.02	□□□□□ -1.77
CNOT2-222	ENST00000550155	KCNC3	Q14003	757 aa		4.02	□□□□□ -1.77
CNOT2-222	ENST00000550155	UGP2	Q16851	508 aa		4.02	□□□□□ -1.77
CNOT2-222	ENST00000550155	HSP90AB4P	Q58FF6	505 aa		4.02	□□□□□ -1.77
CNOT2-222	ENST00000550155	DCAF10	Q5QP82	559 aa		4.02	□□□□□ -1.77
CNOT2-222	ENST00000550155	ZNF613	Q6PF04	617 aa		4.02	□□□□□ -1.77
CNOT2-222	ENST00000550155	PSRC1	Q6PGN9	363 aa	Predicted RBP	4.02	□□□□□ -1.77
CNOT2-222	ENST00000550155		Q6ZSR9	355 aa		4.02	□□□□□ -1.77
CNOT2-222	ENST00000550155	P2RY8	Q86VZ1	359 aa		4.02	□□□□□ -1.77
CNOT2-222	ENST00000550155	CPSF7	Q8N684	471 aa	Known RBP	4.02	□□□□□ -1.77
CNOT2-222	ENST00000550155	C18orf12	Q96KH6	178 aa		4.02	□□□□□ -1.77
CNOT2-222	ENST00000550155	CHMP1A	Q9HD42	196 aa	Predicted RBP	4.02	□□□□□ -1.77
CNOT2-222	ENST00000550155	SLC7A10	Q9NS82	523 aa		4.02	□□□□□ -1.77
CNOT2-222	ENST00000550155	OLA1	Q9NTK5	396 aa	Known RBP	4.02	□□□□□ -1.77
CNOT2-222	ENST00000550155	INTS9	Q9NV88	658 aa	Known RBP	4.02	□□□□□ -1.77
CNOT2-222	ENST00000550155	AASS	Q9UDR5	926 aa		4.02	□□□□□ -1.77
CNOT2-222	ENST00000550155	PRSS51	A0A1B0GVH4	220 aa		4.01	□□□□□ -1.77
CNOT2-222	ENST00000550155		B4E171	279 aa		4.01	□□□□□ -1.77
CNOT2-222	ENST00000550155	RSL1D1	O76021	490 aa	Known RBP	4.01	□□□□□ -1.77
CNOT2-222	ENST00000550155	TBX18	O95935	607 aa		4.01	□□□□□ -1.77
CNOT2-222	ENST00000550155	CLTB	P09497	229 aa		4.01	□□□□□ -1.77
CNOT2-222	ENST00000550155	EFNA1	P20827	205 aa	Predicted RBP	4.01	□□□□□ -1.77
CNOT2-222	ENST00000550155	MAN1A1	P33908	653 aa		4.01	□□□□□ -1.77
CNOT2-222	ENST00000550155	TSPAN7	P41732	249 aa		4.01	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms