RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 TFDP3Q5H9I0 405 aa13.21□□□□□ -0.29
TROAP-211ENST00000549891 PLEKHS1Q5SXH7 462 aa13.21□□□□□ -0.29
TROAP-211ENST00000549891 JMJD6Q6NYC1 403 aaPredicted RBP13.21□□□□□ -0.29
TROAP-211ENST00000549891 DUS1LQ6P1R4 473 aaKnown RBP13.21□□□□□ -0.29
TROAP-211ENST00000549891 SLC38A9Q8NBW4 561 aa13.21□□□□□ -0.29
TROAP-211ENST00000549891 ACVR1CQ8NER5 493 aa13.21□□□□□ -0.29
TROAP-211ENST00000549891 OR4E2Q8NGC2 313 aa13.21□□□□□ -0.29
TROAP-211ENST00000549891 DCUN1D1Q96GG9 259 aa13.21□□□□□ -0.29
TROAP-211ENST00000549891 OXNAD1Q96HP4 312 aaPredicted RBP13.21□□□□□ -0.29
TROAP-211ENST00000549891 FERMT1Q9BQL6 677 aa13.21□□□□□ -0.29
TROAP-211ENST00000549891 TLR10Q9BXR5 811 aa13.21□□□□□ -0.29
TROAP-211ENST00000549891 ASB8Q9H765 288 aa13.21□□□□□ -0.29
TROAP-211ENST00000549891 ACTR5Q9H9F9 607 aaPredicted RBP13.21□□□□□ -0.29
TROAP-211ENST00000549891 GPR83Q9NYM4 423 aa13.21□□□□□ -0.29
TROAP-211ENST00000549891 FAM8A1Q9UBU6 413 aa13.21□□□□□ -0.29
TROAP-211ENST00000549891 RSPH14Q9UHP6 348 aa13.21□□□□□ -0.29
TROAP-211ENST00000549891 SERTAD3Q9UJW9 196 aa13.21□□□□□ -0.29
TROAP-211ENST00000549891 POMT2Q9UKY4 750 aa13.21□□□□□ -0.29
TROAP-211ENST00000549891 INTUQ9ULD6 942 aa13.21□□□□□ -0.29
TROAP-211ENST00000549891 PIKFYVEQ9Y2I7 2098 aa13.2□□□□□ -0.3
TROAP-211ENST00000549891 GSAPA4D1B5 854 aa13.2□□□□□ -0.3
TROAP-211ENST00000549891 C5orf60A6NFR6 353 aa13.2□□□□□ -0.3
TROAP-211ENST00000549891 SLC9B1P1A6NJY1 282 aa13.2□□□□□ -0.3
TROAP-211ENST00000549891 TMEM150CB9EJG8 249 aa13.2□□□□□ -0.3
TROAP-211ENST00000549891 CFAP99D6REC4 459 aa13.2□□□□□ -0.3
TROAP-211ENST00000549891 F5H423 210 aaPredicted RBP13.2□□□□□ -0.3
TROAP-211ENST00000549891 CBFA2T2O43439 604 aa13.2□□□□□ -0.3
TROAP-211ENST00000549891 SRP72O76094 671 aaKnown RBP13.2□□□□□ -0.3
TROAP-211ENST00000549891 DDAH2O95865 285 aa13.2□□□□□ -0.3
TROAP-211ENST00000549891 HBQ1P09105 142 aa13.2□□□□□ -0.3
TROAP-211ENST00000549891 COMTP21964 271 aa13.2□□□□□ -0.3
TROAP-211ENST00000549891 RORAP35398 523 aa13.2□□□□□ -0.3
TROAP-211ENST00000549891 PREPP48147 710 aa13.2□□□□□ -0.3
TROAP-211ENST00000549891 GEMP55040 296 aa13.2□□□□□ -0.3
TROAP-211ENST00000549891 TAF1AQ15573 450 aaPredicted RBP13.2□□□□□ -0.3
TROAP-211ENST00000549891 ZNF449Q6P9G9 518 aa13.2□□□□□ -0.3
TROAP-211ENST00000549891 SPOCD1Q6ZMY3 1216 aa13.2□□□□□ -0.3
TROAP-211ENST00000549891 RAB43Q86YS6 212 aa13.2□□□□□ -0.3
TROAP-211ENST00000549891 SYTL1Q8IYJ3 562 aa13.2□□□□□ -0.3
TROAP-211ENST00000549891 CFAP206Q8IYR0 622 aa13.2□□□□□ -0.3
TROAP-211ENST00000549891 FDCSPQ8NFU4 85 aa13.2□□□□□ -0.3
TROAP-211ENST00000549891 SPDYE1Q8NFV5 336 aaPredicted RBP13.2□□□□□ -0.3
TROAP-211ENST00000549891 HM13Q8TCT9 377 aa13.2□□□□□ -0.3
TROAP-211ENST00000549891 HEXDCQ8WVB3 486 aa13.2□□□□□ -0.3
TROAP-211ENST00000549891 LCN9Q8WX39 176 aa13.2□□□□□ -0.3
TROAP-211ENST00000549891 PNPLA2Q96AD5 504 aa13.2□□□□□ -0.3
TROAP-211ENST00000549891 ULK4Q96C45 1275 aa13.2□□□□□ -0.3
TROAP-211ENST00000549891 SRMSQ9H3Y6 488 aa13.2□□□□□ -0.3
TROAP-211ENST00000549891 NHEJ1Q9H9Q4 299 aaPredicted RBP13.2□□□□□ -0.3
TROAP-211ENST00000549891 ABHD10Q9NUJ1 306 aa13.2□□□□□ -0.3
TROAP-211ENST00000549891 SPTLC3Q9NUV7 552 aa13.2□□□□□ -0.3
TROAP-211ENST00000549891 MAP10Q9P2G4 905 aa13.2□□□□□ -0.3
TROAP-211ENST00000549891 CRLS1Q9UJA2 301 aa13.2□□□□□ -0.3
TROAP-211ENST00000549891 PADI2Q9Y2J8 665 aa13.2□□□□□ -0.3
TROAP-211ENST00000549891 HIVEP3Q5T1R4 2406 aa13.19□□□□□ -0.3
TROAP-211ENST00000549891 CCDC88CQ9P219 2028 aa13.19□□□□□ -0.3
TROAP-211ENST00000549891 C17orf113A0A1B0GUU1 675 aa13.19□□□□□ -0.3
TROAP-211ENST00000549891 C9J4A7 227 aa13.19□□□□□ -0.3
TROAP-211ENST00000549891 IFRD1O00458 451 aaPredicted RBP13.19□□□□□ -0.3
TROAP-211ENST00000549891 ZNF185O15231 689 aa13.19□□□□□ -0.3
TROAP-211ENST00000549891 CRTAMO95727 393 aa13.19□□□□□ -0.3
TROAP-211ENST00000549891 POLBP06746 335 aa13.19□□□□□ -0.3
TROAP-211ENST00000549891 AGXTP21549 392 aa13.19□□□□□ -0.3
TROAP-211ENST00000549891 CA5AP35218 305 aa13.19□□□□□ -0.3
TROAP-211ENST00000549891 ARCN1P48444 511 aaKnown RBP13.19□□□□□ -0.3
TROAP-211ENST00000549891 ABRQ12979 859 aa13.19□□□□□ -0.3
TROAP-211ENST00000549891 TCEAL1Q15170 157 aa13.19□□□□□ -0.3
TROAP-211ENST00000549891 ITPRIPL1Q6GPH6 555 aa13.19□□□□□ -0.3
TROAP-211ENST00000549891 CCDC50Q8IVM0 306 aa13.19□□□□□ -0.3
TROAP-211ENST00000549891 RCOR2Q8IZ40 523 aa13.19□□□□□ -0.3
TROAP-211ENST00000549891 GLIS1Q8NBF1 620 aa13.19□□□□□ -0.3
TROAP-211ENST00000549891 OR4K2Q8NGD2 314 aa13.19□□□□□ -0.3
TROAP-211ENST00000549891 SGSM3Q96HU1 749 aa13.19□□□□□ -0.3
TROAP-211ENST00000549891 RMDN2Q96LZ7 410 aa13.19□□□□□ -0.3
TROAP-211ENST00000549891 IP6K3Q96PC2 410 aa13.19□□□□□ -0.3
TROAP-211ENST00000549891 QKIQ96PU8 341 aaKnown RBP eCLIP13.19□□□□□ -0.3
TROAP-211ENST00000549891 C19orf43Q9BQ61 176 aa13.19□□□□□ -0.3
TROAP-211ENST00000549891 C17orf62Q9BQA9 187 aa13.19□□□□□ -0.3
TROAP-211ENST00000549891 DHRS4Q9BTZ2 278 aa13.19□□□□□ -0.3
TROAP-211ENST00000549891 NUDT9Q9BW91 350 aa13.19□□□□□ -0.3
TROAP-211ENST00000549891 VPS37BQ9H9H4 285 aa13.19□□□□□ -0.3
TROAP-211ENST00000549891 PCMTD2Q9NV79 361 aa13.19□□□□□ -0.3
TROAP-211ENST00000549891 C5AR2Q9P296 337 aa13.19□□□□□ -0.3
TROAP-211ENST00000549891 AAR2Q9Y312 384 aaKnown RBP13.19□□□□□ -0.3
TROAP-211ENST00000549891 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.19□□□□□ -0.3
TROAP-211ENST00000549891 HYOU1Q9Y4L1 999 aa13.19□□□□□ -0.3
TROAP-211ENST00000549891 ARL5AQ9Y689 179 aa13.19□□□□□ -0.3
TROAP-211ENST00000549891 NOTCH2Q04721 2471 aa13.18□□□□□ -0.3
TROAP-211ENST00000549891 UNC79Q9P2D8 2635 aa13.18□□□□□ -0.3
TROAP-211ENST00000549891 A6NL46 340 aa13.18□□□□□ -0.3
TROAP-211ENST00000549891 C2orf74A8MZ97 194 aa13.18□□□□□ -0.3
TROAP-211ENST00000549891 TCP11X1B4DZS4 312 aa13.18□□□□□ -0.3
TROAP-211ENST00000549891 E7EQ34 232 aa13.18□□□□□ -0.3
TROAP-211ENST00000549891 KLHL41O60662 606 aa13.18□□□□□ -0.3
TROAP-211ENST00000549891 SEMA7AO75326 666 aa13.18□□□□□ -0.3
TROAP-211ENST00000549891 ZRANB2O95218 330 aaKnown RBP eCLIP13.18□□□□□ -0.3
TROAP-211ENST00000549891 AGTP01019 485 aa13.18□□□□□ -0.3
TROAP-211ENST00000549891 IGHEP01854 428 aa13.18□□□□□ -0.3
TROAP-211ENST00000549891 CD63P08962 238 aa13.18□□□□□ -0.3
TROAP-211ENST00000549891 ITGALP20701 1170 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms