RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 PRR19A6NJB7 356 aa17.03■□□□□ 0.32
LETMD1-220ENST00000549686 PRR33A8MZF0 331 aa17.03■□□□□ 0.32
LETMD1-220ENST00000549686 TK2O00142 265 aa17.03■□□□□ 0.32
LETMD1-220ENST00000549686 H2AFYO75367 372 aaKnown RBP17.03■□□□□ 0.32
LETMD1-220ENST00000549686 MATN4O95460 622 aa17.03■□□□□ 0.32
LETMD1-220ENST00000549686 FUCA1P04066 466 aa17.03■□□□□ 0.32
LETMD1-220ENST00000549686 BPGMP07738 259 aa17.03■□□□□ 0.32
LETMD1-220ENST00000549686 CYP2A7P20853 494 aa17.03■□□□□ 0.32
LETMD1-220ENST00000549686 IDSP22304 550 aa17.03■□□□□ 0.32
LETMD1-220ENST00000549686 ATP5F1P24539 256 aaPredicted RBP17.03■□□□□ 0.32
LETMD1-220ENST00000549686 HOXD12P35452 270 aa17.03■□□□□ 0.32
LETMD1-220ENST00000549686 PREPP48147 710 aa17.03■□□□□ 0.32
LETMD1-220ENST00000549686 DHPSP49366 369 aaPredicted RBP17.03■□□□□ 0.32
LETMD1-220ENST00000549686 HK3P52790 923 aa17.03■□□□□ 0.32
LETMD1-220ENST00000549686 IRX4P78413 519 aa17.03■□□□□ 0.32
LETMD1-220ENST00000549686 NFKB2Q00653 900 aa17.03■□□□□ 0.32
LETMD1-220ENST00000549686 FZD2Q14332 565 aa17.03■□□□□ 0.32
LETMD1-220ENST00000549686 NFE2L1Q14494 772 aa17.03■□□□□ 0.32
LETMD1-220ENST00000549686 OR4D1Q15615 310 aa17.03■□□□□ 0.32
LETMD1-220ENST00000549686 TSNQ15631 228 aaKnown RBP17.03■□□□□ 0.32
LETMD1-220ENST00000549686 PLA2G4EQ3MJ16 856 aa17.03■□□□□ 0.32
LETMD1-220ENST00000549686 TPRG1LQ5T0D9 272 aa17.03■□□□□ 0.32
LETMD1-220ENST00000549686 NAPRTQ6XQN6 538 aa17.03■□□□□ 0.32
LETMD1-220ENST00000549686 CEP68Q76N32 757 aa17.03■□□□□ 0.32
LETMD1-220ENST00000549686 RABEPKQ7Z6M1 372 aa17.03■□□□□ 0.32
LETMD1-220ENST00000549686 GPSM1Q86YR5 675 aa17.03■□□□□ 0.32
LETMD1-220ENST00000549686 SLC22A9Q8IVM8 553 aa17.03■□□□□ 0.32
LETMD1-220ENST00000549686 ASB11Q8WXH4 323 aa17.03■□□□□ 0.32
LETMD1-220ENST00000549686 ATOH8Q96SQ7 321 aa17.03■□□□□ 0.32
LETMD1-220ENST00000549686 SLC12A9Q9BXP2 914 aa17.03■□□□□ 0.32
LETMD1-220ENST00000549686 C12orf65Q9H3J6 166 aaKnown RBP17.03■□□□□ 0.32
LETMD1-220ENST00000549686 MRPL40Q9NQ50 206 aaKnown RBP17.03■□□□□ 0.32
LETMD1-220ENST00000549686 KLC4Q9NSK0 619 aa17.03■□□□□ 0.32
LETMD1-220ENST00000549686 NUDT4Q9NZJ9 180 aa17.03■□□□□ 0.32
LETMD1-220ENST00000549686 CPSF2Q9P2I0 782 aaKnown RBP17.03■□□□□ 0.32
LETMD1-220ENST00000549686 SLC23A2Q9UGH3 650 aa17.03■□□□□ 0.32
LETMD1-220ENST00000549686 OARD1Q9Y530 152 aa17.03■□□□□ 0.32
LETMD1-220ENST00000549686 PCYT1BQ9Y5K3 369 aaPredicted RBP17.03■□□□□ 0.32
LETMD1-220ENST00000549686 A0A1B0GTW7 788 aa17.02■□□□□ 0.32
LETMD1-220ENST00000549686 G3V2L1 256 aa17.02■□□□□ 0.32
LETMD1-220ENST00000549686 GFYI3L273 518 aa17.02■□□□□ 0.32
LETMD1-220ENST00000549686 CDC7O00311 574 aa17.02■□□□□ 0.32
LETMD1-220ENST00000549686 IFRD1O00458 451 aaPredicted RBP17.02■□□□□ 0.32
LETMD1-220ENST00000549686 HRO43593 1189 aa17.02■□□□□ 0.32
LETMD1-220ENST00000549686 CATP04040 527 aaKnown RBP17.02■□□□□ 0.32
LETMD1-220ENST00000549686 RPN2P04844 631 aa17.02■□□□□ 0.32
LETMD1-220ENST00000549686 HIST1H2AGP0C0S8 130 aaPredicted RBP17.02■□□□□ 0.32
LETMD1-220ENST00000549686 SLC35G4P0C7Q5 338 aa17.02■□□□□ 0.32
LETMD1-220ENST00000549686 NEFHP12036 1026 aa17.02■□□□□ 0.32
LETMD1-220ENST00000549686 HIST1H2ADP20671 130 aa17.02■□□□□ 0.32
LETMD1-220ENST00000549686 MAOBP27338 520 aa17.02■□□□□ 0.32
LETMD1-220ENST00000549686 C21orf59P57076 290 aa17.02■□□□□ 0.32
LETMD1-220ENST00000549686 NXPH1P58417 271 aa17.02■□□□□ 0.32
LETMD1-220ENST00000549686 NAA20P61599 178 aa17.02■□□□□ 0.32
LETMD1-220ENST00000549686 CDKL1Q00532 357 aa17.02■□□□□ 0.32
LETMD1-220ENST00000549686 ILF3Q12906 894 aaKnown RBP eCLIP17.02■□□□□ 0.321e-6■□□□□ 8.9
LETMD1-220ENST00000549686 PDK4Q16654 411 aa17.02■□□□□ 0.32
LETMD1-220ENST00000549686 UNC5DQ6UXZ4 953 aa17.02■□□□□ 0.32
LETMD1-220ENST00000549686 WASH2PQ6VEQ5 465 aa17.02■□□□□ 0.32
LETMD1-220ENST00000549686 RAB44Q7Z6P3 723 aaPredicted RBP17.02■□□□□ 0.32
LETMD1-220ENST00000549686 PDZD3Q86UT5 571 aa17.02■□□□□ 0.32
LETMD1-220ENST00000549686 HID1Q8IV36 788 aa17.02■□□□□ 0.32
LETMD1-220ENST00000549686 RASGRP3Q8IV61 690 aa17.02■□□□□ 0.32
LETMD1-220ENST00000549686 VRK3Q8IV63 474 aa17.02■□□□□ 0.32
LETMD1-220ENST00000549686 NUDCD3Q8IVD9 361 aa17.02■□□□□ 0.32
LETMD1-220ENST00000549686 FBXO15Q8NCQ5 510 aaPredicted RBP17.02■□□□□ 0.32
LETMD1-220ENST00000549686 MAGEC3Q8TD91 643 aa17.02■□□□□ 0.32
LETMD1-220ENST00000549686 CKAP2Q8WWK9 683 aa17.02■□□□□ 0.32
LETMD1-220ENST00000549686 TSACCQ96A04 125 aaPredicted RBP17.02■□□□□ 0.32
LETMD1-220ENST00000549686 HIST1H2AHQ96KK5 128 aa17.02■□□□□ 0.32
LETMD1-220ENST00000549686 MAGEB18Q96M61 343 aa17.02■□□□□ 0.32
LETMD1-220ENST00000549686 HIST1H2AJQ99878 128 aa17.02■□□□□ 0.32
LETMD1-220ENST00000549686 H2AFJQ9BTM1 129 aa17.02■□□□□ 0.32
LETMD1-220ENST00000549686 CAPS2Q9BXY5 557 aa17.02■□□□□ 0.32
LETMD1-220ENST00000549686 GSDMCQ9BYG8 508 aa17.02■□□□□ 0.32
LETMD1-220ENST00000549686 UNKQ9C0B0 810 aaKnown RBP17.02■□□□□ 0.32
LETMD1-220ENST00000549686 OR52A5Q9H2C5 316 aa17.02■□□□□ 0.32
LETMD1-220ENST00000549686 CCDC134Q9H6E4 229 aa17.02■□□□□ 0.32
LETMD1-220ENST00000549686 PARVBQ9HBI1 364 aa17.02■□□□□ 0.32
LETMD1-220ENST00000549686 MLXIPLQ9NP71 852 aa17.02■□□□□ 0.32
LETMD1-220ENST00000549686 WASH6PQ9NQA3 447 aa17.02■□□□□ 0.32
LETMD1-220ENST00000549686 SIRPGQ9P1W8 387 aa17.02■□□□□ 0.32
LETMD1-220ENST00000549686 FAM8A1Q9UBU6 413 aa17.02■□□□□ 0.32
LETMD1-220ENST00000549686 DNAJC16Q9Y2G8 782 aa17.02■□□□□ 0.32
LETMD1-220ENST00000549686 GALR2O43603 387 aaPredicted RBP17.01■□□□□ 0.31
LETMD1-220ENST00000549686 GPR37L1O60883 481 aa17.01■□□□□ 0.31
LETMD1-220ENST00000549686 PSIP1O75475 530 aaKnown RBP17.01■□□□□ 0.31
LETMD1-220ENST00000549686 S100BP04271 92 aaPredicted RBP17.01■□□□□ 0.31
LETMD1-220ENST00000549686 WNT1P04628 370 aa17.01■□□□□ 0.31
LETMD1-220ENST00000549686 SBK3P0C264 359 aa17.01■□□□□ 0.31
LETMD1-220ENST00000549686 MAP4P27816 1152 aaKnown RBP17.01■□□□□ 0.31
LETMD1-220ENST00000549686 AP1S2P56377 157 aa17.01■□□□□ 0.31
LETMD1-220ENST00000549686 DNAJB13P59910 316 aa17.01■□□□□ 0.31
LETMD1-220ENST00000549686 EIF2B5Q13144 721 aaKnown RBP17.01■□□□□ 0.31
LETMD1-220ENST00000549686 PCLAFQ15004 111 aa17.01■□□□□ 0.31
LETMD1-220ENST00000549686 PPP1R3AQ16821 1122 aa17.01■□□□□ 0.31
LETMD1-220ENST00000549686 SBSNQ6UWP8 590 aa17.01■□□□□ 0.31
LETMD1-220ENST00000549686 XKR5Q6UX68 686 aa17.01■□□□□ 0.31
LETMD1-220ENST00000549686 FAM83HQ6ZRV2 1179 aaPredicted RBP17.01■□□□□ 0.31
LETMD1-220ENST00000549686 RGS9BPQ6ZS82 235 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms