RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 TUBB4BP68371 445 aa14.14□□□□□ -0.15
DDX54-203ENST00000546869 MGAT5Q09328 741 aa14.14□□□□□ -0.15
DDX54-203ENST00000546869 CUL1Q13616 776 aa14.14□□□□□ -0.15
DDX54-203ENST00000546869 SPIDRQ14159 915 aa14.14□□□□□ -0.15
DDX54-203ENST00000546869 WDR74Q6RFH5 385 aaPredicted RBP14.14□□□□□ -0.15
DDX54-203ENST00000546869 PDZD3Q86UT5 571 aa14.14□□□□□ -0.15
DDX54-203ENST00000546869 SLC26A11Q86WA9 606 aa14.14□□□□□ -0.15
DDX54-203ENST00000546869 SLC22A15Q8IZD6 547 aa14.14□□□□□ -0.15
DDX54-203ENST00000546869 Q8N9G6 341 aaPredicted RBP14.14□□□□□ -0.15
DDX54-203ENST00000546869 SPDYE1Q8NFV5 336 aaPredicted RBP14.14□□□□□ -0.15
DDX54-203ENST00000546869 OR10G6Q8NH81 332 aa14.14□□□□□ -0.15
DDX54-203ENST00000546869 KCNJ9Q92806 393 aa14.14□□□□□ -0.15
DDX54-203ENST00000546869 CFAP36Q96G28 342 aa14.14□□□□□ -0.15
DDX54-203ENST00000546869 RMDN2Q96LZ7 410 aa14.14□□□□□ -0.15
DDX54-203ENST00000546869 C12orf66Q96MD2 445 aa14.14□□□□□ -0.15
DDX54-203ENST00000546869 DEPDC7Q96QD5 511 aa14.14□□□□□ -0.15
DDX54-203ENST00000546869 RAB33BQ9H082 229 aa14.14□□□□□ -0.15
DDX54-203ENST00000546869 MVB12BQ9H7P6 319 aa14.14□□□□□ -0.15
DDX54-203ENST00000546869 NSMCE4AQ9NXX6 385 aa14.14□□□□□ -0.15
DDX54-203ENST00000546869 PDP2Q9P2J9 529 aa14.14□□□□□ -0.15
DDX54-203ENST00000546869 MTRF1LQ9UGC7 380 aaKnown RBP14.14□□□□□ -0.15
DDX54-203ENST00000546869 ANGPTL2Q9UKU9 493 aa14.14□□□□□ -0.15
DDX54-203ENST00000546869 CORO1CQ9ULV4 474 aaPredicted RBP14.14□□□□□ -0.15
DDX54-203ENST00000546869 ZFC3H1O60293 1989 aaKnown RBP14.14□□□□□ -0.15
DDX54-203ENST00000546869 IQCF5A8MTL0 148 aa14.13□□□□□ -0.15
DDX54-203ENST00000546869 D6RAR5 112 aa14.13□□□□□ -0.15
DDX54-203ENST00000546869 SPAG6O75602 509 aa14.13□□□□□ -0.15
DDX54-203ENST00000546869 AHSGP02765 367 aa14.13□□□□□ -0.15
DDX54-203ENST00000546869 GABRB3P28472 473 aa14.13□□□□□ -0.15
DDX54-203ENST00000546869 ATP5DP30049 168 aa14.13□□□□□ -0.15
DDX54-203ENST00000546869 CCKBRP32239 447 aa14.13□□□□□ -0.15
DDX54-203ENST00000546869 ZFP36L1Q07352 338 aaKnown RBP14.13□□□□□ -0.15
DDX54-203ENST00000546869 CAMK2BQ13554 666 aa14.13□□□□□ -0.15
DDX54-203ENST00000546869 GPR18Q14330 331 aa14.13□□□□□ -0.15
DDX54-203ENST00000546869 GBX1Q14549 363 aa14.13□□□□□ -0.15
DDX54-203ENST00000546869 TMED2Q15363 201 aa14.13□□□□□ -0.15
DDX54-203ENST00000546869 ISXQ2M1V0 245 aa14.13□□□□□ -0.15
DDX54-203ENST00000546869 ZNF549Q6P9A3 640 aa14.13□□□□□ -0.15
DDX54-203ENST00000546869 TRMT10BQ6PF06 316 aaKnown RBP14.13□□□□□ -0.15
DDX54-203ENST00000546869 C3orf62Q6ZUJ4 267 aa14.13□□□□□ -0.15
DDX54-203ENST00000546869 OTOAQ7RTW8 1153 aa14.13□□□□□ -0.15
DDX54-203ENST00000546869 PIM3Q86V86 326 aa14.13□□□□□ -0.15
DDX54-203ENST00000546869 IFT20Q8IY31 132 aa14.13□□□□□ -0.15
DDX54-203ENST00000546869 EIF1ADQ8N9N8 165 aaKnown RBP14.13□□□□□ -0.15
DDX54-203ENST00000546869 TFGQ92734 400 aaPredicted RBP14.13□□□□□ -0.15
DDX54-203ENST00000546869 KIR3DX1Q9H7L2 352 aa14.13□□□□□ -0.15
DDX54-203ENST00000546869 FBXO6Q9NRD1 293 aaPredicted RBP14.13□□□□□ -0.15
DDX54-203ENST00000546869 MED16Q9Y2X0 877 aa14.13□□□□□ -0.15
DDX54-203ENST00000546869 ASXL3Q9C0F0 2248 aa14.13□□□□□ -0.15
DDX54-203ENST00000546869 DUX1O43812 170 aa14.12□□□□□ -0.15
DDX54-203ENST00000546869 TOP3BO95985 862 aaKnown RBP14.12□□□□□ -0.15
DDX54-203ENST00000546869 CHRM3P20309 590 aa14.12□□□□□ -0.15
DDX54-203ENST00000546869 ECHS1P30084 290 aa14.12□□□□□ -0.15
DDX54-203ENST00000546869 SKIV2L2P42285 1042 aaKnown RBP14.12□□□□□ -0.15
DDX54-203ENST00000546869 PREPP48147 710 aa14.12□□□□□ -0.15
DDX54-203ENST00000546869 CLCN7P51798 805 aa14.12□□□□□ -0.15
DDX54-203ENST00000546869 GPX6P59796 221 aa14.12□□□□□ -0.15
DDX54-203ENST00000546869 HSPA14Q0VDF9 509 aa14.12□□□□□ -0.15
DDX54-203ENST00000546869 TARDBPQ13148 414 aaKnown RBP eCLIP14.12□□□□□ -0.15
DDX54-203ENST00000546869 BOP1Q14137 746 aaKnown RBP14.12□□□□□ -0.15
DDX54-203ENST00000546869 SYTL3Q4VX76 610 aa14.12□□□□□ -0.15
DDX54-203ENST00000546869 DNTTIP2Q5QJE6 756 aaKnown RBP14.12□□□□□ -0.15
DDX54-203ENST00000546869 TMEM71Q6P5X7 295 aa14.12□□□□□ -0.15
DDX54-203ENST00000546869 CNSTQ6PJW8 725 aa14.12□□□□□ -0.15
DDX54-203ENST00000546869 TBC1D21Q8IYX1 336 aa14.12□□□□□ -0.15
DDX54-203ENST00000546869 KRT222Q8N1A0 295 aa14.12□□□□□ -0.15
DDX54-203ENST00000546869 OR4D9Q8NGE8 314 aa14.12□□□□□ -0.15
DDX54-203ENST00000546869 LKAAEAR1Q8TD35 194 aa14.12□□□□□ -0.15
DDX54-203ENST00000546869 TMEM74Q96NL1 305 aa14.12□□□□□ -0.15
DDX54-203ENST00000546869 AARSD1Q9BTE6 412 aaKnown RBP14.12□□□□□ -0.15
DDX54-203ENST00000546869 CCDC68Q9H2F9 335 aa14.12□□□□□ -0.15
DDX54-203ENST00000546869 TFB2MQ9H5Q4 396 aaKnown RBP14.12□□□□□ -0.15
DDX54-203ENST00000546869 LRRC4CQ9HCJ2 640 aa14.12□□□□□ -0.15
DDX54-203ENST00000546869 PPANQ9NQ55 473 aaKnown RBP14.12□□□□□ -0.15
DDX54-203ENST00000546869 IMP3Q9NV31 184 aaKnown RBP14.12□□□□□ -0.15
DDX54-203ENST00000546869 ZFATQ9P243 1243 aa14.12□□□□□ -0.15
DDX54-203ENST00000546869 FAM8A1Q9UBU6 413 aa14.12□□□□□ -0.15
DDX54-203ENST00000546869 EPHA6Q9UF33 1036 aa14.12□□□□□ -0.15
DDX54-203ENST00000546869 POLG2Q9UHN1 485 aa14.12□□□□□ -0.15
DDX54-203ENST00000546869 SLC24A2Q9UI40 661 aa14.12□□□□□ -0.15
DDX54-203ENST00000546869 KLK13Q9UKR3 277 aa14.12□□□□□ -0.15
DDX54-203ENST00000546869 SPTBN2O15020 2390 aa14.11□□□□□ -0.15
DDX54-203ENST00000546869 E5RI56 91 aa14.11□□□□□ -0.15
DDX54-203ENST00000546869 EIF3FO00303 357 aaPredicted RBP14.11□□□□□ -0.15
DDX54-203ENST00000546869 NIPSNAP2O75323 286 aa14.11□□□□□ -0.15
DDX54-203ENST00000546869 UBXN7O94888 489 aa14.11□□□□□ -0.15
DDX54-203ENST00000546869 SSTR1P30872 391 aa14.11□□□□□ -0.15
DDX54-203ENST00000546869 PDX1P52945 283 aa14.11□□□□□ -0.15
DDX54-203ENST00000546869 LIMK2P53671 638 aa14.11□□□□□ -0.15
DDX54-203ENST00000546869 MPP1Q00013 466 aa14.11□□□□□ -0.15
DDX54-203ENST00000546869 CFHR1Q03591 330 aa14.11□□□□□ -0.15
DDX54-203ENST00000546869 TRA2AQ13595 282 aaKnown RBP eCLIP14.11□□□□□ -0.15
DDX54-203ENST00000546869 UGT3A1Q6NUS8 523 aa14.11□□□□□ -0.15
DDX54-203ENST00000546869 KLHL35Q6PF15 583 aa14.11□□□□□ -0.15
DDX54-203ENST00000546869 UNC5DQ6UXZ4 953 aa14.11□□□□□ -0.15
DDX54-203ENST00000546869 NEK10Q6ZWH5 1172 aa14.11□□□□□ -0.15
DDX54-203ENST00000546869 SLITRK4Q8IW52 837 aa14.11□□□□□ -0.15
DDX54-203ENST00000546869 ACVR1CQ8NER5 493 aa14.11□□□□□ -0.15
DDX54-203ENST00000546869 OR5K2Q8NHB8 316 aa14.11□□□□□ -0.15
DDX54-203ENST00000546869 IFT81Q8WYA0 676 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms