RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 CXCL16Q9H2A7 254 aa6.38□□□□□ -1.39
SNHG1-225ENST00000545920 CLEC4MQ9H2X3 399 aaPredicted RBP6.38□□□□□ -1.39
SNHG1-225ENST00000545920 AGO3Q9H9G7 860 aaKnown RBP6.38□□□□□ -1.39
SNHG1-225ENST00000545920 NANOGQ9H9S0 305 aa6.38□□□□□ -1.39
SNHG1-225ENST00000545920 NT5MQ9NPB1 228 aa6.38□□□□□ -1.39
SNHG1-225ENST00000545920 RHBDL2Q9NX52 303 aa6.38□□□□□ -1.39
SNHG1-225ENST00000545920 IL37Q9NZH6 218 aa6.38□□□□□ -1.39
SNHG1-225ENST00000545920 KLHL42Q9P2K6 505 aa6.38□□□□□ -1.39
SNHG1-225ENST00000545920 EBF1Q9UH73 591 aa6.38□□□□□ -1.39
SNHG1-225ENST00000545920 PCTPQ9UKL6 214 aa6.38□□□□□ -1.39
SNHG1-225ENST00000545920 RNF112Q9ULX5 631 aa6.38□□□□□ -1.39
SNHG1-225ENST00000545920 GINS2Q9Y248 185 aa6.38□□□□□ -1.39
SNHG1-225ENST00000545920 COQ6Q9Y2Z9 468 aa6.38□□□□□ -1.39
SNHG1-225ENST00000545920 HS3ST4Q9Y661 456 aa6.38□□□□□ -1.39
SNHG1-225ENST00000545920 A3GALT2U3KPV4 340 aa6.38□□□□□ -1.39
SNHG1-225ENST00000545920 KAT6AQ92794 2004 aa6.37□□□□□ -1.39
SNHG1-225ENST00000545920 EVPLQ92817 2033 aa6.37□□□□□ -1.39
SNHG1-225ENST00000545920 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.37□□□□□ -1.39
SNHG1-225ENST00000545920 FAM92AA1XBS5 289 aa6.37□□□□□ -1.39
SNHG1-225ENST00000545920 FUOMA2VDF0 154 aa6.37□□□□□ -1.39
SNHG1-225ENST00000545920 C2orf81A6NN90 581 aa6.37□□□□□ -1.39
SNHG1-225ENST00000545920 SUPT3HB4E1H0 165 aa6.37□□□□□ -1.39
SNHG1-225ENST00000545920 H3BMM5 538 aa6.37□□□□□ -1.39
SNHG1-225ENST00000545920 H7C0S8 307 aa6.37□□□□□ -1.39
SNHG1-225ENST00000545920 J3QW42 95 aa6.37□□□□□ -1.39
SNHG1-225ENST00000545920 SLC28A1O00337 649 aa6.37□□□□□ -1.39
SNHG1-225ENST00000545920 PLOD2O00469 737 aa6.37□□□□□ -1.39
SNHG1-225ENST00000545920 DYNC1LI2O43237 492 aaPredicted RBP6.37□□□□□ -1.39
SNHG1-225ENST00000545920 CA12O43570 354 aa6.37□□□□□ -1.39
SNHG1-225ENST00000545920 PRAMEF11O60813 436 aa6.37□□□□□ -1.39
SNHG1-225ENST00000545920 UGT2B11O75310 529 aa6.37□□□□□ -1.39
SNHG1-225ENST00000545920 SUPT3HO75486 399 aa6.37□□□□□ -1.39
SNHG1-225ENST00000545920 NDUFS3O75489 264 aa6.37□□□□□ -1.39
SNHG1-225ENST00000545920 KCNH1O95259 989 aa6.37□□□□□ -1.39
SNHG1-225ENST00000545920 ATE1O95260 518 aa6.37□□□□□ -1.39
SNHG1-225ENST00000545920 ZBTB11O95625 1053 aaPredicted RBP6.37□□□□□ -1.39
SNHG1-225ENST00000545920 OTCP00480 354 aa6.37□□□□□ -1.39
SNHG1-225ENST00000545920 GOT2P00505 430 aaKnown RBP6.37□□□□□ -1.39
SNHG1-225ENST00000545920 ESR1P03372 595 aa6.37□□□□□ -1.39
SNHG1-225ENST00000545920 IL6P05231 212 aa6.37□□□□□ -1.39
SNHG1-225ENST00000545920 UGT1A6P19224 532 aa6.37□□□□□ -1.39
SNHG1-225ENST00000545920 GGT1P19440 569 aa6.37□□□□□ -1.39
SNHG1-225ENST00000545920 CDH3P22223 829 aa6.37□□□□□ -1.39
SNHG1-225ENST00000545920 UGT1A1P22309 533 aa6.37□□□□□ -1.39
SNHG1-225ENST00000545920 UGT1A4P22310 534 aa6.37□□□□□ -1.39
SNHG1-225ENST00000545920 NME2P22392 152 aa6.37□□□□□ -1.39
SNHG1-225ENST00000545920 BDNFP23560 247 aa6.37□□□□□ -1.39
SNHG1-225ENST00000545920 CRHBPP24387 322 aa6.37□□□□□ -1.39
SNHG1-225ENST00000545920 EEF1DP29692 281 aaKnown RBP6.37□□□□□ -1.39
SNHG1-225ENST00000545920 AKT1P31749 480 aa6.37□□□□□ -1.39
SNHG1-225ENST00000545920 EPHX2P34913 555 aa6.37□□□□□ -1.39
SNHG1-225ENST00000545920 UGT1A3P35503 534 aa6.37□□□□□ -1.39
SNHG1-225ENST00000545920 UGT1A5P35504 534 aa6.37□□□□□ -1.39
SNHG1-225ENST00000545920 RXRGP48443 463 aa6.37□□□□□ -1.39
SNHG1-225ENST00000545920 PLK1P53350 603 aa6.37□□□□□ -1.39
SNHG1-225ENST00000545920 ATXN3P54252 364 aaPredicted RBP6.37□□□□□ -1.39
SNHG1-225ENST00000545920 CDH15P55291 814 aa6.37□□□□□ -1.39
SNHG1-225ENST00000545920 TBX4P57082 545 aa6.37□□□□□ -1.39
SNHG1-225ENST00000545920 IL2P60568 153 aa6.37□□□□□ -1.39
SNHG1-225ENST00000545920 MLLT1Q03111 559 aaPredicted RBP6.37□□□□□ -1.39
SNHG1-225ENST00000545920 ZNF33BQ06732 778 aa6.37□□□□□ -1.39
SNHG1-225ENST00000545920 TUSC3Q13454 348 aa6.37□□□□□ -1.39
SNHG1-225ENST00000545920 ZNF235Q14590 738 aa6.37□□□□□ -1.39
SNHG1-225ENST00000545920 TGFBIQ15582 683 aa6.37□□□□□ -1.39
SNHG1-225ENST00000545920 TIGD5Q53EQ6 642 aa6.37□□□□□ -1.39
SNHG1-225ENST00000545920 C6orf141Q5SZD1 244 aa6.37□□□□□ -1.39
SNHG1-225ENST00000545920 GJC2Q5T442 439 aaPredicted RBP6.37□□□□□ -1.39
SNHG1-225ENST00000545920 GPR107Q5VW38 600 aa6.37□□□□□ -1.39
SNHG1-225ENST00000545920 ATG9BQ674R7 924 aa6.37□□□□□ -1.39
SNHG1-225ENST00000545920 GLYATQ6IB77 296 aa6.37□□□□□ -1.39
SNHG1-225ENST00000545920 OVOS1Q6IE37 1185 aa6.37□□□□□ -1.39
SNHG1-225ENST00000545920 TMEM207Q6UWW9 146 aa6.37□□□□□ -1.39
SNHG1-225ENST00000545920 LAYNQ6UX15 382 aa6.37□□□□□ -1.39
SNHG1-225ENST00000545920 CERS6Q6ZMG9 384 aa6.37□□□□□ -1.39
SNHG1-225ENST00000545920 ARHGAP36Q6ZRI8 547 aa6.37□□□□□ -1.39
SNHG1-225ENST00000545920 PRR23CQ6ZRP0 262 aa6.37□□□□□ -1.39
SNHG1-225ENST00000545920 PRSS48Q7RTY5 328 aa6.37□□□□□ -1.39
SNHG1-225ENST00000545920 PTAR1Q7Z6K3 402 aaPredicted RBP6.37□□□□□ -1.39
SNHG1-225ENST00000545920 C14orf80Q86SX3 495 aa6.37□□□□□ -1.39
SNHG1-225ENST00000545920 TLK2Q86UE8 772 aa6.37□□□□□ -1.39
SNHG1-225ENST00000545920 LACC1Q8IV20 430 aa6.37□□□□□ -1.39
SNHG1-225ENST00000545920 PARP8Q8N3A8 854 aa6.37□□□□□ -1.39
SNHG1-225ENST00000545920 OR9I1Q8NGQ6 314 aa6.37□□□□□ -1.39
SNHG1-225ENST00000545920 OR5K1Q8NHB7 308 aa6.37□□□□□ -1.39
SNHG1-225ENST00000545920 FBLIM1Q8WUP2 373 aa6.37□□□□□ -1.39
SNHG1-225ENST00000545920 TMEM40Q8WWA1 233 aa6.37□□□□□ -1.39
SNHG1-225ENST00000545920 MUL1Q969V5 352 aa6.37□□□□□ -1.39
SNHG1-225ENST00000545920 GTPBP3Q969Y2 492 aaKnown RBP6.37□□□□□ -1.39
SNHG1-225ENST00000545920 ANAPC16Q96DE5 110 aa6.37□□□□□ -1.39
SNHG1-225ENST00000545920 HSPBAP1Q96EW2 488 aa6.37□□□□□ -1.39
SNHG1-225ENST00000545920 ZNF641Q96N77 438 aaPredicted RBP6.37□□□□□ -1.39
SNHG1-225ENST00000545920 MGME1Q9BQP7 344 aa6.37□□□□□ -1.39
SNHG1-225ENST00000545920 MROQ9BYG7 248 aa6.37□□□□□ -1.39
SNHG1-225ENST00000545920 ADAM19Q9H013 955 aa6.37□□□□□ -1.39
SNHG1-225ENST00000545920 GABARAPL1Q9H0R8 117 aa6.37□□□□□ -1.39
SNHG1-225ENST00000545920 MIR1-1HGQ9H1L0 117 aa6.37□□□□□ -1.39
SNHG1-225ENST00000545920 MAGEH1Q9H213 219 aa6.37□□□□□ -1.39
SNHG1-225ENST00000545920 NOL6Q9H6R4 1146 aaKnown RBP6.37□□□□□ -1.39
SNHG1-225ENST00000545920 PARVBQ9HBI1 364 aa6.37□□□□□ -1.39
SNHG1-225ENST00000545920 GOLGA2P5Q9HBQ8 144 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms